Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_G09
(853 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 34 0.17
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 33 0.22
02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550 32 0.67
11_06_0610 - 25449085-25453284 31 0.88
07_01_0373 + 2783596-2784933 31 0.88
01_01_0448 - 3332238-3332330,3332414-3332481,3332570-3332618,333... 31 0.88
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 30 2.7
02_04_0452 + 23044190-23045227 29 3.6
02_01_0219 - 1437685-1437723,1437932-1438091,1438385-1438514,143... 29 3.6
02_01_0302 - 2021221-2023305 29 4.7
01_06_0404 + 29098141-29098214,29098459-29098673,29099491-290995... 29 4.7
09_06_0081 + 20745627-20748144,20748211-20748308 29 6.2
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 29 6.2
04_04_1125 + 31085106-31085714 29 6.2
04_01_0041 - 464695-464850,467485-469029 29 6.2
01_05_0227 - 19512866-19514983 29 6.2
08_02_0875 + 22103903-22106293 28 8.2
02_05_0788 + 31758119-31758384,31758482-31758634,31759385-317595... 28 8.2
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 33.9 bits (74), Expect = 0.17
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +2
Query: 533 PPSPAISATS-TRSSNPRFHTPTTPDL--TSISINPLTPYXKEFAPGLKPPLSSEAPSAY 703
P SP+ S TS + S ++PT+P TS S +P +P +P P + +PS
Sbjct: 1699 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPSHA 1758
Query: 704 LTPSS 718
+PSS
Sbjct: 1759 YSPSS 1763
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 33.5 bits (73), Expect = 0.22
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +2
Query: 533 PPSPAISATS-TRSSNPRFHTPTTPDL--TSISINPLTPYXKEFAPGLKPPLSSEAPSA- 700
P SP+ S TS + S ++PT+P TS + +P +P +PG P S +PS+
Sbjct: 1747 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSP 1806
Query: 701 YLTPSSL 721
PSS+
Sbjct: 1807 SYNPSSV 1813
>02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550
Length = 204
Score = 31.9 bits (69), Expect = 0.67
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +2
Query: 527 IKPPSPAISATSTR-SSNPR--FHTPTTPDLTSISINPLTP 640
I PPSPA + S+R S +PR F TP T T+ S +P +P
Sbjct: 25 ITPPSPASTPRSSRPSESPRSGFSTPATAPRTAASPSPPSP 65
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 31.5 bits (68), Expect = 0.88
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSIS-INPLTPYXKEFAPGLKPPLSSE 688
PP+P A+S P HTP+ P+ T S +P TP K +P PP + E
Sbjct: 618 PPTPESKASSPPPPAPEGHTPSPPESTPPSEKSPPTPESKASSP---PPPTPE 667
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLT-SISINPLTPYXKEFAPGLKPPLSSE 688
PP+P A+S P HTP+ P T +P TP + +P PP + E
Sbjct: 651 PPTPESKASSPPPPTPEGHTPSPPKSTPPTEKSPPTPESESSSP---PPPAPE 700
>07_01_0373 + 2783596-2784933
Length = 445
Score = 31.5 bits (68), Expect = 0.88
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = -3
Query: 92 EEEKALTKEGMAEAAETXKGTISSMNRS 9
E+++ LTK G + +ET KG++ S++RS
Sbjct: 151 EQQQQLTKSGCSSTSETSKGSVLSLSRS 178
>01_01_0448 -
3332238-3332330,3332414-3332481,3332570-3332618,
3332716-3332798,3332900-3333023,3333389-3333486,
3333555-3333634,3333712-3333782,3333872-3333953,
3334158-3334237,3334365-3334416,3334843-3334958
Length = 331
Score = 31.5 bits (68), Expect = 0.88
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 545 AISATSTRSSNPRFHTPTTP 604
A S+T+TR S PR H PTTP
Sbjct: 2 AASSTATRLSPPRLHAPTTP 21
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTP--YXKEFAPGLKPPLSSEAPSAYL 706
PPSP +S+P TP PD S P P +PG P ++ A
Sbjct: 50 PPSPPPPPAPDFTSDPS--TPPAPDAPSGDFFPPAPPTTTTPTSPGTTPSPTTVAADVSK 107
Query: 707 TPSSLGMAKXGFAP 748
TPS G G P
Sbjct: 108 TPSGSGSGHHGGGP 121
>02_04_0452 + 23044190-23045227
Length = 345
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 480 HPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPP 602
H +L H+ +A SH SR H P + P S PP
Sbjct: 166 HGCLLLHHAGHGHGHAHSHSHSHSRAHNPSTRPPTSAPPPP 206
>02_01_0219 -
1437685-1437723,1437932-1438091,1438385-1438514,
1438627-1438696,1439264-1439407,1439771-1439837,
1439970-1440019,1440386-1440559,1440881-1440934,
1441008-1441112
Length = 330
Score = 29.5 bits (63), Expect = 3.6
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +1
Query: 283 TETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSL--KIPVTVDLCWTTADVT 456
TE +N V V L SS GY D + ++ V + K+ V +D TAD++
Sbjct: 167 TEAGANRVLVCDLH--SSQAMGYFDIPVDHVYGQVMNLIGDVRGKVAVMMDDMIDTADIS 224
Query: 457 VEGVNVLATPSSSRITIGGLALMHQ 531
+ +N+L P G L+HQ
Sbjct: 225 LPNINILMKPIKLGTIAKGAELLHQ 249
>02_01_0302 - 2021221-2023305
Length = 694
Score = 29.1 bits (62), Expect = 4.7
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTS--ISINPLTPYXKE-----FA--PGLKPPLSSE 688
PSP S+T+ S +P TPT P S ++ P P + FA PG P+ S
Sbjct: 519 PSPPSSSTAPPSHSPPQSTPTHPSYPSPPVTYTPPPPTSADRPDVRFAPPPGSYGPIPST 578
Query: 689 APSAYLTPS 715
PS+ PS
Sbjct: 579 PPSSGSPPS 587
>01_06_0404 +
29098141-29098214,29098459-29098673,29099491-29099596,
29099686-29100235,29100332-29100429,29100519-29100764,
29100867-29100981,29101092-29101305,29101402-29101991
Length = 735
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAP 661
P+P ++A S+R NP PD+T+ ++ + Y + +P
Sbjct: 447 PAPVMAAFSSRGPNPITPQILKPDITAPGVSVIAAYSEAVSP 488
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/72 (29%), Positives = 29/72 (40%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 712
PP+PA ++ S P HTP ++ P T P PP S+ +PS
Sbjct: 514 PPAPAPPVSTLPSPAPSVHTP------PVTAPPATAPPMIAPPVATPPDSASSPSTVPRM 567
Query: 713 SSLGMAKXGFAP 748
S +A AP
Sbjct: 568 PSAPLALRALAP 579
>06_01_1052 +
8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 577 SPIPYTNHPRLNIHFHQSSDAVLXGVRAGVKASVV 681
S I N +IHF S +A+ GVRAG+ S++
Sbjct: 174 SKIKLVNDLLESIHFIASIEAMFLGVRAGIHPSII 208
>04_04_1125 + 31085106-31085714
Length = 202
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPG--LKPPLSSEAPS 697
P+PA T P TPT P T + P TP P PP + APS
Sbjct: 51 PTPATPTTPPTPWTPPPATPTPPTPTPWTPTPATPPPTPATPATPTTPPTPAPAPS 106
>04_01_0041 - 464695-464850,467485-469029
Length = 566
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 244 IIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPS-APSLKIPV 420
+I R + D++ T +SN + V +LP VSS + Y D ++ + P P ++ V
Sbjct: 40 LISVFRPFTDVSLTLCRSNYIGVTNLPIVSSECEAYYDDFVSGADFTARPQVVPPWRLAV 99
Query: 421 TVD 429
+D
Sbjct: 100 PLD 102
>01_05_0227 - 19512866-19514983
Length = 705
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 461 STVTSAVVQQRSTVTGILRLGAEGKTTASRL 369
S +T + +QQ + ++ LG GKTT ++L
Sbjct: 18 SKLTESSIQQNIKIVSVIGLGGSGKTTLAKL 48
>08_02_0875 + 22103903-22106293
Length = 796
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAP 661
P+P ++A S R NP+ PDL + +N L + P
Sbjct: 506 PAPVVAAFSARGPNPQSPEILKPDLIAPGLNILAAWPSGVGP 547
>02_05_0788 +
31758119-31758384,31758482-31758634,31759385-31759509,
31759650-31759678,31760943-31761008,31761059-31761125,
31761226-31761370,31761404-31761451,31762014-31762182,
31762645-31762779,31762858-31763064,31763608-31763735,
31763815-31763866,31764046-31764060,31764502-31764609
Length = 570
Score = 28.3 bits (60), Expect = 8.2
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +1
Query: 235 QRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
Q I + ++ L N TV + N + GY+ +N+ + PSLK
Sbjct: 198 QVFCIVLEMFFYQLLQLLKVPNEKTVNVIENAIQTLPGYQPPKHINIGEYISSHVPSLK- 256
Query: 415 PVTVDLCWTTADVTVEGVNVLATPSS 492
D C T ++ +EG++ L S+
Sbjct: 257 ----DFCEPTVEM-LEGMSALKALST 277
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,086,749
Number of Sequences: 37544
Number of extensions: 476966
Number of successful extensions: 1549
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1548
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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