Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_G09
(853 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.042
SB_46249| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 33 0.29
SB_6924| Best HMM Match : TTL (HMM E-Value=4.4e-09) 32 0.68
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_25387| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_29112| Best HMM Match : Mucin (HMM E-Value=1.7) 30 2.7
SB_33380| Best HMM Match : Herpes_capsid (HMM E-Value=3) 29 3.6
SB_59599| Best HMM Match : rve (HMM E-Value=1.69557e-43) 29 4.8
SB_30122| Best HMM Match : YadA (HMM E-Value=2) 29 4.8
SB_24452| Best HMM Match : PKD_channel (HMM E-Value=0) 29 4.8
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_30304| Best HMM Match : fn3 (HMM E-Value=1.5e-32) 29 4.8
SB_48885| Best HMM Match : DUF741 (HMM E-Value=0.88) 29 6.3
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 29 6.3
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 28 8.4
SB_20390| Best HMM Match : LRR_1 (HMM E-Value=0.34) 28 8.4
SB_18127| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 35.9 bits (79), Expect = 0.042
Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 1/107 (0%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRF-HTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLT 709
P +P+ +T + S P HTP+TP S P TP P P + PS +T
Sbjct: 658 PSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPSMPN-TP--STPSTPSTPSTPIT 714
Query: 710 PSSLGMAKXGFAPLFQVNDESQASRLYXSSFXA*SXPLLQSTPHXKS 850
P + AP + + ++ S+ S P STP S
Sbjct: 715 PGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPS 761
Score = 34.7 bits (76), Expect = 0.096
Identities = 28/106 (26%), Positives = 41/106 (38%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 712
P +P+ +T + S P TP+TP S P TP + P + PSA TP
Sbjct: 455 PSTPSTPSTPSTPSTPS--TPSTPSTPSTPSTPSTPSTPSTSSTPSTPSTPSTPSAPGTP 512
Query: 713 SSLGMAKXGFAPLFQVNDESQASRLYXSSFXA*SXPLLQSTPHXKS 850
+ AP + ++ S+ S P + STP S
Sbjct: 513 GTPSTPSTPSAPGTPSTPSTPSTPSTPSTPSTPSTPSMPSTPSTPS 558
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 712
P +P+++ T + S P TP+TP S P TP P +S PS TP
Sbjct: 446 PSTPSLTHTPSTPSTPS--TPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTSSTPSTPSTP 503
Query: 713 SS 718
S+
Sbjct: 504 ST 505
Score = 33.9 bits (74), Expect = 0.17
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRF-HTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLT 709
P +P+ +T + S P +TP+TP S+ P TP P + PS T
Sbjct: 258 PSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPSTPST 317
Query: 710 PSSLGMAKXGFAPLFQVNDESQASRLYXSS 799
PS+ K P + +++ S+
Sbjct: 318 PSTPSTPKTPSTPCTPNTPSTNRKKIFISA 347
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 712
P +P+ +T + S P TP+TP S P TP P++ PS TP
Sbjct: 117 PSTPSTPSTPSAPSTPS--TPSTPSTPSTPSTPSTPSTPSTPSTPSTPITPGTPSTPSTP 174
Query: 713 SSLG 724
S+ G
Sbjct: 175 SAPG 178
Score = 33.1 bits (72), Expect = 0.29
Identities = 26/106 (24%), Positives = 39/106 (36%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 712
P +P+ +T + S P TP+ P S P TP P + PS +TP
Sbjct: 108 PSTPSTPSTPSTPSTPS--TPSAPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPITP 165
Query: 713 SSLGMAKXGFAPLFQVNDESQASRLYXSSFXA*SXPLLQSTPHXKS 850
+ AP + + ++ S+ S P STP S
Sbjct: 166 GTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPS 211
Score = 33.1 bits (72), Expect = 0.29
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 712
P +P+ +T + S P TP+TP LT P TP P + PS TP
Sbjct: 652 PSTPSTPSTPSTPSTPS--TPSTPSLTHTPSTPSTPSTPSTPSTPSMPNTPSTPSTPSTP 709
Query: 713 SS 718
S+
Sbjct: 710 ST 711
Score = 33.1 bits (72), Expect = 0.29
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRF-HTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLT 709
P +P++ +T + S P TP+TP S P TP P + PS
Sbjct: 832 PSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTPSTPCTPNTPSTNRK 891
Query: 710 PSSLGM 727
+SLGM
Sbjct: 892 STSLGM 897
Score = 32.7 bits (71), Expect = 0.39
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRF-HTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLT 709
P +P+ +T + S P +TP+TP S+ P TP P + PS T
Sbjct: 808 PSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPSTPST 867
Query: 710 PSSLGMAKXGFAP 748
PS+ K P
Sbjct: 868 PSTPSTPKTPSTP 880
Score = 32.3 bits (70), Expect = 0.51
Identities = 28/110 (25%), Positives = 39/110 (35%), Gaps = 4/110 (3%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHT----PTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSA 700
P +P+ T + S P H+ P+TP S P TP P + APS
Sbjct: 45 PSTPSTPITPSTPSTPCTHSTPSAPSTPSTPSTPCTPSTPSTPSTPSTPSTPSTPSAPST 104
Query: 701 YLTPSSLGMAKXGFAPLFQVNDESQASRLYXSSFXA*SXPLLQSTPHXKS 850
TPS+ P + ++ S+ S P STP S
Sbjct: 105 PSTPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPSTPSTPSTPS 154
Score = 32.3 bits (70), Expect = 0.51
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRF-HTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLT 709
P +P+ +T + S P HTP+TP S P TP P P + PS T
Sbjct: 434 PSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPSTPS-TP--STPSTPSTPSTPST 490
Query: 710 PSS 718
PS+
Sbjct: 491 PST 493
Score = 31.9 bits (69), Expect = 0.68
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = +2
Query: 527 IKPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYL 706
I P +P+ +T + S P TP+TP S P TP P + PS
Sbjct: 241 ITPSTPSTPSTPSTPSMPS--TPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPS 298
Query: 707 TPSS 718
TPS+
Sbjct: 299 TPST 302
Score = 31.9 bits (69), Expect = 0.68
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 712
P +P+ +T + P TP+TP S P TP P + PS TP
Sbjct: 512 PGTPSTPSTPSAPGTPS--TPSTPSTPSTPSTPSTPSTPSMPSTPSTPSTPSTPSTPSTP 569
Query: 713 SSL 721
S+L
Sbjct: 570 STL 572
Score = 31.9 bits (69), Expect = 0.68
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = +2
Query: 527 IKPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYL 706
I P +P+ +T + S P TP+TP S P TP P + PS
Sbjct: 791 ITPSTPSTPSTPSTPSMPS--TPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPS 848
Query: 707 TPSS 718
TPS+
Sbjct: 849 TPST 852
Score = 31.5 bits (68), Expect = 0.90
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 712
P +P+ +T + S P TP+TP S P TP P + PS TP
Sbjct: 102 PSTPSTPSTPSTPSTPS--TPSTPSTPSAPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTP 159
Query: 713 SS 718
S+
Sbjct: 160 ST 161
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 712
P +P+ +T + S P TP+TP S P TP P + PS TP
Sbjct: 246 PSTPSTPSTPSMPSTPS--TPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTPSTP 303
Query: 713 SS 718
S+
Sbjct: 304 ST 305
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRF-HTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLT 709
P +P +T S P TP+TP S++ P TP P + PS T
Sbjct: 422 PSTPCTHSTPGTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPSTPSTPSTPST 481
Query: 710 PSS 718
PS+
Sbjct: 482 PST 484
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = +2
Query: 539 SPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTPSS 718
+P +T + S P TP+TP LT P TP P + PS TPS+
Sbjct: 430 TPGTPSTPSTPSTPS--TPSTPSLTHTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPST 487
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 712
P +P+ +T + S P TP+TP S P TP P + PS TP
Sbjct: 796 PSTPSTPSTPSMPSTPS--TPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTPSTP 853
Query: 713 SS 718
S+
Sbjct: 854 ST 855
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 712
P +P+ +T + S P TP+TP S P TP P + PS TP
Sbjct: 99 PSAPSTPSTPSTPSTPS--TPSTPSTPSTPSAPSTPSTPSTPSTPSTPSTPSTPSTPSTP 156
Query: 713 SS 718
S+
Sbjct: 157 ST 158
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/72 (27%), Positives = 28/72 (38%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 712
P +P+ +T + + P TP+TP S P TP P + PS TP
Sbjct: 440 PSTPSTPSTPSLTHTPS--TPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTSSTP 497
Query: 713 SSLGMAKXGFAP 748
S+ AP
Sbjct: 498 STPSTPSTPSAP 509
Score = 30.3 bits (65), Expect = 2.1
Identities = 26/103 (25%), Positives = 37/103 (35%), Gaps = 1/103 (0%)
Frame = +2
Query: 533 PPSPAI-SATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLT 709
P +P+ SA T + TP+TP S P TP L P + P+ T
Sbjct: 168 PSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPST 227
Query: 710 PSSLGMAKXGFAPLFQVNDESQASRLYXSSFXA*SXPLLQSTP 838
PS+ P+ + ++ S S P STP
Sbjct: 228 PSTPSTPSTLSTPITPSTPSTPSTPSTPSMPSTPSTPSTPSTP 270
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/67 (29%), Positives = 25/67 (37%)
Frame = +2
Query: 548 ISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTPSSLGM 727
+S ST S+ TP+TP S P TP P + PS TPS+ M
Sbjct: 637 LSTPSTPSTPSTRSTPSTPSTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPSM 696
Query: 728 AKXGFAP 748
P
Sbjct: 697 PNTPSTP 703
Score = 30.3 bits (65), Expect = 2.1
Identities = 26/103 (25%), Positives = 37/103 (35%), Gaps = 1/103 (0%)
Frame = +2
Query: 533 PPSPAI-SATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLT 709
P +P+ SA T + TP+TP S P TP L P + P+ T
Sbjct: 718 PSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPST 777
Query: 710 PSSLGMAKXGFAPLFQVNDESQASRLYXSSFXA*SXPLLQSTP 838
PS+ P+ + ++ S S P STP
Sbjct: 778 PSTPSTPSTLSTPITPSTPSTPSTPSTPSMPSTPSTPSTPSTP 820
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 712
P +P+ +T + S P TP+TP S P P P + PS TP
Sbjct: 96 PSTPSAPSTPSTPSTPS--TPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPSTPSTPSTP 153
Query: 713 SS 718
S+
Sbjct: 154 ST 155
Score = 29.1 bits (62), Expect = 4.8
Identities = 27/106 (25%), Positives = 38/106 (35%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 712
P +P+ +T + PR TP+TP S P TP P + PS TP
Sbjct: 404 PCTPSTPSTPSTPITPR--TPSTPCTHSTPGTPSTPSTPSTPSTPSTPSLTHTPSTPSTP 461
Query: 713 SSLGMAKXGFAPLFQVNDESQASRLYXSSFXA*SXPLLQSTPHXKS 850
S+ P + ++ S+ S P STP S
Sbjct: 462 STPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTSSTPSTPSTPSTPS 507
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRF-HTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLT 709
P + ++ +T + + P TP+TP S I P TP P + PS T
Sbjct: 210 PSTLSMPSTPSMPNTPSTPSTPSTPSTLSTPITPSTPSTPSTPSTPSMPSTPSTPSTPST 269
Query: 710 PSS 718
PS+
Sbjct: 270 PST 272
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRF-HTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLT 709
P + ++ +T + + P TP+TP S I P TP P + PS T
Sbjct: 760 PSTLSMPSTPSMPNTPSTPSTPSTPSTLSTPITPSTPSTPSTPSTPSMPSTPSTPSTPST 819
Query: 710 PSS 718
PS+
Sbjct: 820 PST 822
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 712
P +P+ +T + S P TP+TP S P P P + + PS TP
Sbjct: 826 PNTPSTPSTPSMPSTPS--TPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTPSTPCTP 883
Query: 713 SS 718
++
Sbjct: 884 NT 885
>SB_46249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 834
Score = 33.5 bits (73), Expect = 0.22
Identities = 24/76 (31%), Positives = 38/76 (50%)
Frame = +2
Query: 608 LTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTPSSLGMAKXGFAPLFQVNDESQASRL 787
LTS+ + LTP + + PPL AP LTP + + +PL++ + ++S L
Sbjct: 206 LTSLQV--LTPLQVLTSVQVLPPLQVLAPLQVLTPLQVSLFPLQSSPLYKSSPPYKSSSL 263
Query: 788 YXSSFXA*SXPLLQST 835
Y SS S L +S+
Sbjct: 264 YKSSSLYKSSSLYKSS 279
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 33.1 bits (72), Expect = 0.29
Identities = 25/60 (41%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 536 PSPAISATSTRSSN-PRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 712
P IS TS SS PR H PTTP T + P T P +S+APSA TP
Sbjct: 257 PQTTISITSIISSAIPRGHLPTTPSTTPQATPPST------TSQTTAPTASQAPSAGETP 310
>SB_6924| Best HMM Match : TTL (HMM E-Value=4.4e-09)
Length = 458
Score = 31.9 bits (69), Expect = 0.68
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 414 TSHS*PLLDYC*RHS*RSQCAGHPFILSHYYWRSRPY--ASSHPPLR 548
T + LL YC R AGHPF+L Y + R Y +S PLR
Sbjct: 91 TKYDIDLLGYCTEQEIRRVVAGHPFLLDGYKFDLRVYVLVTSCDPLR 137
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 30.3 bits (65), Expect = 2.1
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Frame = +2
Query: 533 PPSPA-ISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLT 709
P S A +A +T S F TP + TP + P K P S ++ T
Sbjct: 1270 PQSQATFAAKATPKSQATFAATATPQSQATFAAAATPQSQASFPATKIPQSQANFASKAT 1329
Query: 710 PSSLGMAKXGFAPLFQVNDESQASRLYXSSFXA*SXPLLQST 835
P S P Q N S+A+ ++F A + P Q++
Sbjct: 1330 PQSQASFPATKIPQSQANFASKATPQSQATFAATATPQSQAS 1371
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPP 676
P+PA + T T+ + P HTPTTP T + P P K P P
Sbjct: 94 PTPATTPTPTKPT-PTAHTPTTP--TPTAHTPTKPTPKTPTPTTPTP 137
>SB_25387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Frame = +3
Query: 474 AGHPFILSHYYWRSRPYASSH------PPLRSRLHQPDHQIPDSIHQ 596
+ HP + H+ +S P+ SSH PP + LH+PD+ + HQ
Sbjct: 289 SAHPSQVPHH--KSEPHTSSHKPQLWVPPTQQSLHKPDNPHKNPYHQ 333
>SB_29112| Best HMM Match : Mucin (HMM E-Value=1.7)
Length = 493
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFH-TPTTPDLTSISINPLTPYXKEFAPGLKP-PLSSEAPSAYLT 709
P P AT + +NP H PT P NP T + K PG P P +S
Sbjct: 255 PKPTNPATHPKPTNPATHPKPTNPGTNPKPTNPGT-HPKPMNPGTHPKPTNSATDPKSTN 313
Query: 710 PSSLG 724
P + G
Sbjct: 314 PGTPG 318
>SB_33380| Best HMM Match : Herpes_capsid (HMM E-Value=3)
Length = 474
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = -2
Query: 456 CDVSSSPTKVNCDWYFEARGGRKNDSLKIDKIRVAVAFYDGGDVR**LHSDTVRFGFGAS 277
C + P + W+F + G K DS + + + G V +HS VR G GA+
Sbjct: 275 CVRAHLPNAADQPWFFLSNTGAKIDSNNVQSLLRSFQRSTGVQVSKPIHSTAVRCGSGAT 334
Query: 276 KIE 268
+ E
Sbjct: 335 EEE 337
>SB_59599| Best HMM Match : rve (HMM E-Value=1.69557e-43)
Length = 1803
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Frame = -2
Query: 591 VWNRGFDDRVDVAEIAGEG----GLMHKGE-TANSNARG*RGGQHIDSFNCD---VSSSP 436
+W++ +DVAE+AG G GL + TA S G HID F C +S P
Sbjct: 1545 LWHKDTAGHIDVAEVAGGGATNEGLKKRAAYTAQSVEVGLIVNLHIDIFKCGRYLLSGVP 1604
Query: 435 TKVNCD 418
K+ +
Sbjct: 1605 MKIRLE 1610
>SB_30122| Best HMM Match : YadA (HMM E-Value=2)
Length = 408
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 394 SAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRIT 504
S P K+P+T T+A+VT +++ +PS + +T
Sbjct: 239 SRPETKVPITTIGASTSAEVTTSQRDLMPSPSQAHVT 275
>SB_24452| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 1433
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Frame = +1
Query: 268 FDLTGTETKSNSVTVQS---LPNVSSIIKGYRDAYLVNL 375
F +TG E KS+S+T++ +P V ++ +G D +LV+L
Sbjct: 485 FTITGQEGKSDSITIRHADVIPRV-ALARGNEDVFLVHL 522
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +2
Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKE---FAPGLKPPLSSEA 691
P P ++ S +S+NPR HTP P S + PLTP ++ P PP S A
Sbjct: 77 PRP-LTPPSRQSNNPRPHTP--PSCQSNTPRPLTPPPRQSNTTQPPAYPPRQSYA 128
>SB_30304| Best HMM Match : fn3 (HMM E-Value=1.5e-32)
Length = 808
Score = 29.1 bits (62), Expect = 4.8
Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 5/112 (4%)
Frame = +1
Query: 292 KSNSVTVQSLPNVS--SIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEG 465
+++ VT Q P+ S + GY D N+ PS S I V ++ W T
Sbjct: 207 EAHIVTEQEAPSCSPEDLAVGYSDGKAHNITWSPIPSNQSNGIIVVYEITWVKVANTTRS 266
Query: 466 VNVLATPSSSRITIGGLALMHQATLPCDLGYINP---IIKSPIPYTNHPRLN 612
L SS+ + L LPC + I+ I P P+T LN
Sbjct: 267 RRALDAASSANTSSTSYRLTD--LLPCSVYNISVRGYTIAGPGPFTRPLSLN 316
>SB_48885| Best HMM Match : DUF741 (HMM E-Value=0.88)
Length = 841
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +1
Query: 460 EGVNVLATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIH 618
E V + +PS+S +TI G +L + P G +P + S P N P IH
Sbjct: 560 EVVTTIGSPSTSGVTITGTSLRGDSQAPAVSGSQSPPLTSSTPPMN-PSNPIH 611
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 530 KPPSPAISATST--RSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAY 703
+PP+P T ++P + P+ ++T+ P P E + PP+ ++AP+
Sbjct: 31 QPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTVPPPVVTDAPTTV 90
Query: 704 LTP 712
P
Sbjct: 91 PPP 93
>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
Length = 1249
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +2
Query: 551 SATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTPSS 718
SA+ +++ T + D+TS S N +TP+ +F P + + +PS ++TP+S
Sbjct: 945 SASDVPTTSDDQVTQSASDVTSTSDNQITPFASDFTPTSDNQV-TPSPS-HVTPTS 998
>SB_20390| Best HMM Match : LRR_1 (HMM E-Value=0.34)
Length = 108
Score = 28.3 bits (60), Expect = 8.4
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = +1
Query: 412 IPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPY 591
+P + LC + +++E + A PS +I GG +L+ Q G++ + S +PY
Sbjct: 18 LPYELVLCGSLQIMSIENCPLSALPS--QIVAGGPSLVIQ-------GFVFHVSCSWLPY 68
Query: 592 TNHPRLNIHFHQ 627
++ PR I+F +
Sbjct: 69 SSEPRHAINFRE 80
>SB_18127| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 963
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 590 TPTTPDLTSISINPLTPY 643
TPT PD+T +SI L PY
Sbjct: 75 TPTRPDVTQLSITGLKPY 92
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,208,943
Number of Sequences: 59808
Number of extensions: 493204
Number of successful extensions: 1916
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1779
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2419355818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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