Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_G06
(888 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 24 1.6
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 2.8
AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding prote... 23 3.7
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 4.9
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 6.5
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 22 8.6
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 22 8.6
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 8.6
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 8.6
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 22 8.6
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 22 8.6
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 24.2 bits (50), Expect = 1.6
Identities = 15/79 (18%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -3
Query: 475 CPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHAG-VLNGDERFRHVTTLH 299
C +P S+ + L+ + + + Q NSP + P H+G + R ++++
Sbjct: 30 CTTSPATASLESSLSAAAVAAAAVNYAQQHNSPSPTGSSPQHSGSSASTSPAARTTSSMY 89
Query: 298 AWNETPCARRYYRPRTASA 242
+ A +++ + A A
Sbjct: 90 PYVSAAAAHHHHQQQQAVA 108
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.4 bits (48), Expect = 2.8
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Frame = -2
Query: 770 PSGRGKTXPXSDRLIPAHVPXWMGXTIQRLANLLRN----DRKSRHRRI 636
PS RG+ SDRL P + R + R+ DR SR R +
Sbjct: 1381 PSDRGRNDDGSDRLTSPPTPLSISRAGSRDEDSTRDSTKLDRSSREREV 1429
>AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding protein
ASP5 protein.
Length = 143
Score = 23.0 bits (47), Expect = 3.7
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = -1
Query: 249 LPPNRVSNETMKVVVFQRRSRETISHSCYTSHVSLQCQTRVKLNRVFFP 103
+PP V K +V R+ E C ++ +QC + + FFP
Sbjct: 97 MPPEEVV--IGKEIVAVCRNEEYTGDDCQKTYQYVQCHYKQNPEKFFFP 143
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 691 SNAWRICFAMIGRADIEGSK 632
S WR+C A+ R + E S+
Sbjct: 101 SGLWRVCVAISSRMEYECSR 120
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +1
Query: 193 SSLKNHYFHCFITYSVGRK 249
SS +FHC+ GRK
Sbjct: 420 SSFFQQFFHCYCPVRFGRK 438
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 21.8 bits (44), Expect = 8.6
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +1
Query: 172 VGDRFARSSLKNHYFHCFI 228
+ + A L+N Y+ CFI
Sbjct: 32 IDEILANDRLRNQYYDCFI 50
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.8 bits (44), Expect = 8.6
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +1
Query: 664 LRSKFAKRWIVHP 702
+R K A W++HP
Sbjct: 71 IRQKAAGHWVIHP 83
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.8 bits (44), Expect = 8.6
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +1
Query: 664 LRSKFAKRWIVHP 702
+R K A W++HP
Sbjct: 71 IRQKAAGHWVIHP 83
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.8 bits (44), Expect = 8.6
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +1
Query: 664 LRSKFAKRWIVHP 702
+R K A W++HP
Sbjct: 71 IRQKAAGHWVIHP 83
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 21.8 bits (44), Expect = 8.6
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +1
Query: 172 VGDRFARSSLKNHYFHCFI 228
+ + A L+N Y+ CFI
Sbjct: 32 IDEILANDRLRNQYYDCFI 50
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 21.8 bits (44), Expect = 8.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 200 SDDRAKRSPTHATPLMSPYNARLESSSTGSSFPADSP 90
+D R SP TP+ + Y +E+ + S F D+P
Sbjct: 21 NDKRIYLSPR--TPIKNVYKNNIETKNQLSPFNIDTP 55
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,003
Number of Sequences: 438
Number of extensions: 5046
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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