Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_G04
(861 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8MY33 Cluster: Reverse transcriptase; n=9; Obtectomera... 176 5e-43
UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx mori... 173 4e-42
UniRef50_Q868S6 Cluster: Reverse transcriptase; n=2; Culicidae|R... 69 1e-10
UniRef50_UPI0000D5790F Cluster: PREDICTED: similar to RNA-direct... 69 2e-10
UniRef50_UPI0000D578E5 Cluster: PREDICTED: similar to Hypothetic... 66 1e-09
UniRef50_Q9N9Z1 Cluster: Endonuclease/reverse transcriptase; n=1... 66 1e-09
UniRef50_UPI0000D5776D Cluster: PREDICTED: similar to Hypothetic... 64 3e-09
UniRef50_UPI0000D578E3 Cluster: PREDICTED: similar to Hypothetic... 64 4e-09
UniRef50_UPI0000D57891 Cluster: PREDICTED: similar to Hypothetic... 62 2e-08
UniRef50_UPI00015B47DE Cluster: PREDICTED: similar to has homolo... 60 7e-08
UniRef50_Q868S0 Cluster: Reverse transcriptase; n=2; Anopheles g... 56 9e-07
UniRef50_Q868Q6 Cluster: Reverse transcriptase; n=3; Anopheles g... 54 6e-06
UniRef50_Q868S2 Cluster: Reverse transcriptase; n=4; Anopheles g... 52 2e-05
UniRef50_O44315 Cluster: Reverse transcriptase; n=1; Dugesiella ... 48 4e-04
UniRef50_Q868R0 Cluster: Reverse transcriptase; n=1; Anopheles g... 47 7e-04
UniRef50_Q868S4 Cluster: Reverse transcriptase; n=1; Anopheles g... 46 0.002
UniRef50_Q868R6 Cluster: Reverse transcriptase; n=1; Anopheles g... 44 0.004
UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TR... 44 0.005
UniRef50_Q868R8 Cluster: Reverse transcriptase; n=1; Anopheles g... 44 0.007
UniRef50_Q2H1R0 Cluster: Putative uncharacterized protein; n=5; ... 44 0.007
UniRef50_Q2GQK5 Cluster: Putative uncharacterized protein; n=3; ... 43 0.009
UniRef50_UPI00015B460B Cluster: PREDICTED: similar to Putative 1... 41 0.046
UniRef50_UPI00015B4665 Cluster: PREDICTED: similar to Lian-Aa1 r... 40 0.061
UniRef50_UPI00015B43EC Cluster: PREDICTED: similar to pol-like p... 40 0.061
UniRef50_Q17003 Cluster: Putative reverse transcriptase; n=29; C... 40 0.081
UniRef50_Q8C4T4 Cluster: 10 days neonate cerebellum cDNA, RIKEN ... 39 0.19
UniRef50_O18558 Cluster: Lian-Aa1 retrotransposon protein; n=1; ... 39 0.19
UniRef50_Q03277 Cluster: Retrovirus-related Pol polyprotein from... 39 0.19
UniRef50_Q4F8P9 Cluster: Reverse transcriptase; n=2; Aedes aegyp... 38 0.25
UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase fr... 38 0.25
UniRef50_Q2GMP6 Cluster: Putative uncharacterized protein; n=2; ... 38 0.33
UniRef50_UPI00015B486D Cluster: PREDICTED: similar to Lian-Aa1 r... 37 0.75
UniRef50_Q7NJI5 Cluster: Gll1847 protein; n=1; Gloeobacter viola... 37 0.75
UniRef50_UPI0000E813AF Cluster: PREDICTED: hypothetical protein;... 36 1.3
UniRef50_UPI0000E47148 Cluster: PREDICTED: similar to endonuclea... 36 1.3
UniRef50_Q2IEV0 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_Q7SES2 Cluster: Predicted protein; n=1; Neurospora cras... 36 1.7
UniRef50_Q2HA60 Cluster: Putative uncharacterized protein; n=1; ... 36 1.7
UniRef50_Q55WM6 Cluster: Protein STU1; n=2; Filobasidiella neofo... 36 1.7
UniRef50_O46180 Cluster: Non-LTR retrotransposon reverse transcr... 35 2.3
UniRef50_A6R8Y2 Cluster: Predicted protein; n=5; Onygenales|Rep:... 35 2.3
UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-direct... 35 3.0
UniRef50_Q4RKK1 Cluster: Chromosome 21 SCAF15029, whole genome s... 35 3.0
UniRef50_A5NPD0 Cluster: Aldehyde dehydrogenase; n=2; Proteobact... 35 3.0
UniRef50_Q4PCH7 Cluster: Putative uncharacterized protein; n=1; ... 35 3.0
UniRef50_Q45W67 Cluster: Polyprotein; n=1; Phanerochaete chrysos... 35 3.0
UniRef50_Q9NBI5 Cluster: Reverse transcriptase; n=7; Drosophila|... 34 4.0
UniRef50_UPI0001555862 Cluster: PREDICTED: similar to Fragile X ... 34 5.3
UniRef50_UPI000058923D Cluster: PREDICTED: similar to endonuclea... 34 5.3
UniRef50_A7SEJ9 Cluster: Predicted protein; n=1; Nematostella ve... 34 5.3
UniRef50_Q2S4I7 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_O44317 Cluster: Reverse transcriptase; n=1; Dugesiella ... 33 7.0
UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria gla... 33 7.0
UniRef50_Q2U3Z5 Cluster: Predicted protein; n=1; Aspergillus ory... 33 7.0
UniRef50_UPI00015B47C2 Cluster: PREDICTED: similar to ORF2-encod... 33 9.3
UniRef50_UPI00006C0AAE Cluster: PREDICTED: hypothetical protein;... 33 9.3
UniRef50_Q4SPL1 Cluster: Chromosome 16 SCAF14537, whole genome s... 33 9.3
UniRef50_Q9HX73 Cluster: Putative uncharacterized protein; n=7; ... 33 9.3
UniRef50_A5P172 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Re... 33 9.3
UniRef50_A5ESH3 Cluster: Putative uncharacterized protein; n=2; ... 33 9.3
UniRef50_Q9FRD0 Cluster: Putative uncharacterized protein OSJNBa... 33 9.3
UniRef50_Q55WZ7 Cluster: Putative uncharacterized protein; n=2; ... 33 9.3
UniRef50_Q07851 Cluster: Regulatory protein E2; n=2; Human papil... 33 9.3
>UniRef50_Q8MY33 Cluster: Reverse transcriptase; n=9; Obtectomera|Rep:
Reverse transcriptase - Papilio xuthus
Length = 1053
Score = 176 bits (429), Expect = 5e-43
Identities = 92/200 (46%), Positives = 117/200 (58%), Gaps = 1/200 (0%)
Frame = +1
Query: 97 RRLGLEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHF 276
R LGLEVAL+KSEA+ FH R PPPGA+++VGGV+I +Q ++YLGL+LD RW F+ HF
Sbjct: 698 RALGLEVALQKSEALYFHGPRSRPPPGAHIVVGGVNINIQSHIRYLGLMLDGRWTFEGHF 757
Query: 277 GELVPKXXXXXXXXXXXXPNVGGCSAGVRRLYLGVVRSMALYGAPVWSPXXXXXXXXXXX 456
+L PK PNVGG A RRL+ GVV+SMALYGAPVWS
Sbjct: 758 RQLGPKLMRTAAALGSLLPNVGGPKAACRRLFTGVVQSMALYGAPVWSGALNSRTTEILH 817
Query: 457 XXXXXXXXXXXXGYRTISREVACALAGSLPWDLEAEVXAAVYR-RXTQSLSRGRTPGPSA 633
GYRT+S + AC LAGSLPW LEAE+ AA++ R + + G P
Sbjct: 818 RPQRTMAIRMIRGYRTVSYDAACTLAGSLPWVLEAEILAAIHTWRELKITTDGAPPLRVE 877
Query: 634 VGRWXRAARHLAYAXWRXRL 693
V + + R A + W+ RL
Sbjct: 878 VEAFRKERREEAVSKWQRRL 897
>UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx mori|Rep:
Reverse transcriptase - Bombyx mori (Silk moth)
Length = 1076
Score = 173 bits (422), Expect = 4e-42
Identities = 97/201 (48%), Positives = 115/201 (57%), Gaps = 2/201 (0%)
Frame = +1
Query: 97 RRLGLEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHF 276
RRLGL+VAL KSEA+ FH RR PP +++VGGV I V +LKYLGLVLDSRW F HF
Sbjct: 720 RRLGLDVALNKSEALWFHGPRRAPPVDTHIVVGGVRIGVGVQLKYLGLVLDSRWAFRAHF 779
Query: 277 GELVPKXXXXXXXXXXXXPNVGGCSAGVRRLYLGVVRSMALYGAPVWS-PXXXXXXXXXX 453
ELVP+ PN+GG VRRLY GVVRSMALYGAPVW+ P
Sbjct: 780 AELVPRLMGTAGSLSRLLPNIGGPDQVVRRLYAGVVRSMALYGAPVWAEPRNRATMARFL 839
Query: 454 XXXXXXXXXXXXXGYRTISREVACALAGSLPWDLEAEVXAAVYRRXTQSLSRGRTPGPSA 633
GYRT+S E AC LAG+ PW+LEAE AA YR ++ +RG P +
Sbjct: 840 RRPQRTVAIRVIRGYRTVSFEAACVLAGTPPWELEAESLAADYRWRSELRARGVARVPES 899
Query: 634 VGRWXRA-ARHLAYAXWRXRL 693
R +A +R W RL
Sbjct: 900 ELRARKAHSRRSVLESWSRRL 920
>UniRef50_Q868S6 Cluster: Reverse transcriptase; n=2; Culicidae|Rep:
Reverse transcriptase - Anopheles gambiae (African
malaria mosquito)
Length = 1049
Score = 69.3 bits (162), Expect = 1e-10
Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 1/138 (0%)
Frame = +1
Query: 178 ANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHFGELVPKXXXXXXXXXXXXPNVGGCSAG 357
A+++ G V + LKYLG+V+D R +F H E K PN+GG +
Sbjct: 751 ASIMAGTVQVESTRSLKYLGVVIDDRLKFKSHLEEACKKVMKAINALAAFTPNIGGPCSS 810
Query: 358 VRRLYLGVVRSMALYGAPVWSP-XXXXXXXXXXXXXXXXXXXXXXXGYRTISREVACALA 534
+RRL+ S+ YGAPVW+ YRTIS E C +A
Sbjct: 811 IRRLHANCAISVLRYGAPVWAHILKEKQHQNTVNKVHRKLAMRVTSAYRTISYEAVCVIA 870
Query: 535 GSLPWDLEAEVXAAVYRR 588
+P + E + +R+
Sbjct: 871 SMMPLCITLEEDSKNFRK 888
>UniRef50_UPI0000D5790F Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 932
Score = 68.5 bits (160), Expect = 2e-10
Identities = 57/204 (27%), Positives = 76/204 (37%), Gaps = 3/204 (1%)
Frame = +1
Query: 106 GLEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHFGEL 285
GL VA K+EA RR P + G I+ Q +KYLG+ LD RF H E+
Sbjct: 619 GLSVAAHKTEATLLTGRRR--PREIKFSLMGEDISPQTSIKYLGVRLDKELRFAPHVEEV 676
Query: 286 VPKXXXXXXXXXXXXPNVGGCSAGVRRLYLGVVRSMALYGAPVW-SPXXXXXXXXXXXXX 462
K PN GG RR+ + V RS LYGA +W S
Sbjct: 677 AAKAERTMAALSRLMPNTGGAKPYRRRMLVAVARSQILYGAEIWGSRHLKSKSLEKLERA 736
Query: 463 XXXXXXXXXXGYRTISREVACALAGSLPWDLEAEVXAAVYRR--XTQSLSRGRTPGPSAV 636
YRT S E +AG+ P L E + R + RT
Sbjct: 737 QRTALLRVTSAYRTTSNEALQVIAGTKPMALAIEERVEIRRMGPGAREAVEDRTR----- 791
Query: 637 GRWXRAARHLAYAXWRXRLLXXLG 708
+W A ++ W +L+ +G
Sbjct: 792 RKWQAAWQNAQNGAWTRKLIPDIG 815
>UniRef50_UPI0000D578E5 Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2); n=6; Tribolium castaneum|Rep: PREDICTED: similar
to Hypothetical 115 kDa protein in type I
retrotransposable element R1DM (ORF 2) - Tribolium
castaneum
Length = 1057
Score = 66.1 bits (154), Expect = 1e-09
Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 4/171 (2%)
Frame = +1
Query: 106 GLEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPK--LKYLGLVLDSRWRFDHHFG 279
GL++A K+EAV RR P N++ ++ ++PK ++YLG+ ++ R F H
Sbjct: 606 GLQLAPEKTEAVLLAGGRR---PDKNIVFKVENVELRPKQNVRYLGVDINQRMTFTSHVM 662
Query: 280 ELVPKXXXXXXXXXXXXPNVGGCSAGVRRLYLGVVRSMALYGAPVWSP--XXXXXXXXXX 453
+ K PNV G S R++ VV S+ +Y AP+W P
Sbjct: 663 RVAAKAEKMAAMLGRLMPNVKGPSPSKRKVMAEVVNSIVMYAAPIWGPTALDMLKYQERL 722
Query: 454 XXXXXXXXXXXXXGYRTISREVACALAGSLPWDLEAEVXAAVYRRXTQSLS 606
YRT+S + +AG +P DL V TQ LS
Sbjct: 723 VQVQRKTALRVCSAYRTVSADAVQVIAGMIPIDLRIHETVKVNFYLTQFLS 773
>UniRef50_Q9N9Z1 Cluster: Endonuclease/reverse transcriptase; n=1;
Drosophila melanogaster|Rep: Endonuclease/reverse
transcriptase - Drosophila melanogaster (Fruit fly)
Length = 989
Score = 65.7 bits (153), Expect = 1e-09
Identities = 48/154 (31%), Positives = 65/154 (42%), Gaps = 1/154 (0%)
Frame = +1
Query: 100 RLGLEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHFG 279
++GL++A K+E V R + V GV I LKYLG+++D R F H
Sbjct: 678 KVGLKIAAHKTEVVLLSS--RKSVECMRVEVKGVEIASAETLKYLGVLIDRRLSFKAHAR 735
Query: 280 ELVPKXXXXXXXXXXXXPNVGGCSAGVRRLYLGVVRSMALYGAPVWS-PXXXXXXXXXXX 456
K PNVGG RRL + V ++ LY AP+WS
Sbjct: 736 YASKKAAMTAAALARIMPNVGGPRLPARRLLVAVSKATLLYAAPIWSCVSTKKTYLDSAR 795
Query: 457 XXXXXXXXXXXXGYRTISREVACALAGSLPWDLE 558
G+RTIS + A AL+G P DL+
Sbjct: 796 AVSRTMALRLIRGFRTISDDAAHALSGITPIDLD 829
>UniRef50_UPI0000D5776D Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2); n=1; Tribolium castaneum|Rep: PREDICTED: similar
to Hypothetical 115 kDa protein in type I
retrotransposable element R1DM (ORF 2) - Tribolium
castaneum
Length = 973
Score = 64.5 bits (150), Expect = 3e-09
Identities = 55/198 (27%), Positives = 75/198 (37%), Gaps = 2/198 (1%)
Frame = +1
Query: 109 LEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHFGELV 288
L++A K+EAV V R P + G I + +KYLG+ +D F H +
Sbjct: 663 LKLAAEKTEAVLL--VGRRRPRAVQFQIMGAKIEPKKVIKYLGIYIDQACTFSDHLAKTA 720
Query: 289 PKXXXXXXXXXXXXPNVGGCSAGVRRLYLGVVRSMALYGAPVW-SPXXXXXXXXXXXXXX 465
K PN+GG + R+L GV SM LYG VW +
Sbjct: 721 AKAEGTISALSRIMPNIGGPGSNRRKLLAGVATSMLLYGCEVWHTALATKKNVVVLESTH 780
Query: 466 XXXXXXXXXGYRTISREVACALAGSLPWDLEAEVXAAVYRRXT-QSLSRGRTPGPSAVGR 642
YRT+S E A + G P L E V +R T S S R+ +
Sbjct: 781 RRILARVACAYRTVSTEAAQVITGVPPARLLVE--ERVKQRCTGMSKSMARS---HTLNL 835
Query: 643 WXRAARHLAYAXWRXRLL 696
W + A W RL+
Sbjct: 836 WQENWQQTTKARWTRRLI 853
>UniRef50_UPI0000D578E3 Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2); n=2; Tribolium castaneum|Rep: PREDICTED: similar
to Hypothetical 115 kDa protein in type I
retrotransposable element R1DM (ORF 2) - Tribolium
castaneum
Length = 1208
Score = 64.1 bits (149), Expect = 4e-09
Identities = 51/201 (25%), Positives = 80/201 (39%), Gaps = 4/201 (1%)
Frame = +1
Query: 106 GLEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPK--LKYLGLVLDSRWRFDHHFG 279
GL++A K+EAV RR P N++ ++ ++PK ++YLG+ ++ R F H
Sbjct: 675 GLQLAPEKTEAVLLAGGRR---PDKNVVFKVENVELRPKQNVRYLGVDINQRMTFTSHVM 731
Query: 280 ELVPKXXXXXXXXXXXXPNVGGCSAGVRRLYLGVVRSMALYGAPVWSP--XXXXXXXXXX 453
+ K PNV G S R++ VV S+ +Y AP+W P
Sbjct: 732 RVAAKAEKMGAMLGRLMPNVKGPSPSKRKVMAEVVNSIVMYAAPIWGPTALDILKYQERL 791
Query: 454 XXXXXXXXXXXXXGYRTISREVACALAGSLPWDLEAEVXAAVYRRXTQSLSRGRTPGPSA 633
YRT+S + +AG +P DL V R T + R +
Sbjct: 792 VQVQRKTALRVCSAYRTVSADAVQVIAGMIPIDLRIHETVKV-RNRTHTKREAR---EWS 847
Query: 634 VGRWXRAARHLAYAXWRXRLL 696
+ W + W RL+
Sbjct: 848 IKEWQNRWNASSKGRWTHRLI 868
>UniRef50_UPI0000D57891 Cluster: PREDICTED: similar to Hypothetical
115 kDa protein in type I retrotransposable element R1DM
(ORF 2), partial; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to Hypothetical 115 kDa protein in
type I retrotransposable element R1DM (ORF 2), partial -
Tribolium castaneum
Length = 2033
Score = 62.1 bits (144), Expect = 2e-08
Identities = 33/103 (32%), Positives = 49/103 (47%)
Frame = +1
Query: 109 LEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHFGELV 288
L++A K+E + R+ PP + V G I+ + +KYLG+ +D F H +
Sbjct: 1317 LKLAPEKTECILLRCKRK--PPAVKINVLGTEISPKSSIKYLGVWIDQNCGFKQHIQQTA 1374
Query: 289 PKXXXXXXXXXXXXPNVGGCSAGVRRLYLGVVRSMALYGAPVW 417
K PN+GG S+ RR+ V S LYGAP+W
Sbjct: 1375 IKVEKTITALSSVMPNIGGPSSSKRRMLSSVAHSAMLYGAPIW 1417
>UniRef50_UPI00015B47DE Cluster: PREDICTED: similar to has homology
with reverse transcriptase; 5 end of coding region for
ORF2 undetermined; putative; n=3; Nasonia
vitripennis|Rep: PREDICTED: similar to has homology with
reverse transcriptase; 5 end of coding region for ORF2
undetermined; putative - Nasonia vitripennis
Length = 883
Score = 60.1 bits (139), Expect = 7e-08
Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 2/182 (1%)
Frame = +1
Query: 106 GLEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHFGEL 285
GL +AL K+E V + P + VG +IT +P K LG+ LD++ + H +
Sbjct: 100 GLTLALDKTEIVLL--TGKQIPTIIPMKVGSETITTKPSDKSLGITLDTKLNYGEHLDRI 157
Query: 286 VPKXXXXXXXXXXXXPNVGGCSAGVRRLYLGVVRSMALYGAPVWSP-XXXXXXXXXXXXX 462
K NV G VRRL + S+ LYGA VW+
Sbjct: 158 CKKVTTRIAQLSRLMANVRGPRPTVRRLLMANTNSILLYGAEVWADVMTMNKYRKKIMAV 217
Query: 463 XXXXXXXXXXGYRTISREVACALAGSLPWDLEAEVXAAVYR-RXTQSLSRGRTPGPSAVG 639
YRT++ E + +AG +P DL + +Y R + + + GP
Sbjct: 218 QRRGALRIACSYRTVAAEASMVIAGVIPVDLLSIERKRIYEARLAWTRTLIKDVGPWVDR 277
Query: 640 RW 645
+W
Sbjct: 278 KW 279
>UniRef50_Q868S0 Cluster: Reverse transcriptase; n=2; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1009
Score = 56.4 bits (130), Expect = 9e-07
Identities = 49/202 (24%), Positives = 78/202 (38%), Gaps = 5/202 (2%)
Frame = +1
Query: 106 GLEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHFGEL 285
GL++A K+E + +R GA + VG + LKYLG+VLD R + H
Sbjct: 672 GLKIAPTKTEFIMVSSHQR-IQHGA-IRVGDHVVHSSRTLKYLGMVLDDRLEYTSHIRYA 729
Query: 286 VPKXXXXXXXXXXXXPNVGGCSAGVRRLYLGVVRSMALYGAPVW-SPXXXXXXXXXXXXX 462
V + PN G S+ VRR+ V + Y +P+W
Sbjct: 730 VERATKLWTTLVRMMPNKAGPSSNVRRVIALTVVAKVRYASPIWCHTLRFANRRQWLRRF 789
Query: 463 XXXXXXXXXXGYRTISREVACALAGSLPWDLEAEVXAAVY-RRXTQSLSRG---RTPGPS 630
+RT S + C LAG +P L + + + RR ++++ +
Sbjct: 790 YRPVVQRVISSFRTTSHDAVCVLAGMIPLHLLLDEDSRTFHRRRAENIAGSVARNMERVT 849
Query: 631 AVGRWXRAARHLAYAXWRXRLL 696
+ RW R + W RL+
Sbjct: 850 TMERWQREWDESVHGRWTYRLI 871
>UniRef50_Q868Q6 Cluster: Reverse transcriptase; n=3; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1248
Score = 53.6 bits (123), Expect = 6e-06
Identities = 41/161 (25%), Positives = 66/161 (40%), Gaps = 1/161 (0%)
Frame = +1
Query: 109 LEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHFGELV 288
L++A K+E V +RRG P + VGG+ I + ++YLG+++ + + H V
Sbjct: 697 LQLAPEKTECVMISSLRRGHPE-IPIRVGGLEIRSKQAIRYLGVMIHDHFLWRPHVTMAV 755
Query: 289 PKXXXXXXXXXXXXPNVGGCSAGVRRLYLGVVRSMALYGAPVWS-PXXXXXXXXXXXXXX 465
K N G RRL GV ++ YGAP+W+
Sbjct: 756 EKANRVVKVVTNVMRNHSGPRVAKRRLLAGVSEAIIRYGAPIWAEATDRQWCQRMLASFQ 815
Query: 466 XXXXXXXXXGYRTISREVACALAGSLPWDLEAEVXAAVYRR 588
G+R+IS VA + +P L + A ++R
Sbjct: 816 RPLAQRVVCGFRSISYSVAVLMPRLIPHPLLIKEDARCHQR 856
>UniRef50_Q868S2 Cluster: Reverse transcriptase; n=4; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1201
Score = 51.6 bits (118), Expect = 2e-05
Identities = 42/167 (25%), Positives = 63/167 (37%), Gaps = 1/167 (0%)
Frame = +1
Query: 109 LEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHFGELV 288
LE+A K+E +++ PP + GGV++ +KYLG+ + + + H E+
Sbjct: 769 LELAHSKTEMTVISSLKQ-PPEEVFITFGGVNVPFSRSIKYLGVRVHAHLSWVPHVKEIT 827
Query: 289 PKXXXXXXXXXXXXPNVGGCSAGVRRLYLGVVRSMALYGAPVW-SPXXXXXXXXXXXXXX 465
K PN+ G + RL V S Y APVW
Sbjct: 828 LKATRIVHAVNRLMPNLHGPRTSMSRLLANVADSTMRYAAPVWHEAIGNQECCRLLRRVQ 887
Query: 466 XXXXXXXXXGYRTISREVACALAGSLPWDLEAEVXAAVYRRXTQSLS 606
+RT+ E A LAG LP L + V+ R L+
Sbjct: 888 RKSAIGLARTFRTVRYETAVLLAGLLPICLAIKEDTRVHSRRGTGLN 934
>UniRef50_O44315 Cluster: Reverse transcriptase; n=1; Dugesiella
sp.|Rep: Reverse transcriptase - Dugesiella sp
Length = 743
Score = 47.6 bits (108), Expect = 4e-04
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Frame = +1
Query: 100 RLGLEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHFG 279
+L L+ A KS+A+ + R +L VGG+ V+ +LKYLGL++DS F HF
Sbjct: 274 KLALDTA--KSKAMVLNSKYRSLDLSHHL-VGGIK--VEKELKYLGLIIDSDLNFQSHFK 328
Query: 280 ELVPKXXXXXXXXXXXXPNVGG-CSAGVRRLYLGVVRSMALYGAPVWSP 423
+ + G C +R Y V+R YGA +W P
Sbjct: 329 AVSARVNRFVHNLRSMTVRANGICPDAIRTYYHQVLRQWMSYGAAIWFP 377
>UniRef50_Q868R0 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1173
Score = 46.8 bits (106), Expect = 7e-04
Identities = 39/165 (23%), Positives = 61/165 (36%), Gaps = 1/165 (0%)
Frame = +1
Query: 109 LEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHFGELV 288
LE+A K+E V R+G +++ GV ++YLG+V+D++ + H
Sbjct: 714 LELAPAKTELVTISSKRQGNI-NVPVVINGVERRTTRSIRYLGVVIDNQLSWKSHVEYCT 772
Query: 289 PKXXXXXXXXXXXXPNVGGCSAGVRRLYLGVVRSMALYGAPVW-SPXXXXXXXXXXXXXX 465
K N G RRL VV S+ Y APVW
Sbjct: 773 TKALRTAKALGCLMRNHSGPKCAKRRLLASVVDSILRYAAPVWHEATKNQECRRMLQRVQ 832
Query: 466 XXXXXXXXXGYRTISREVACALAGSLPWDLEAEVXAAVYRRXTQS 600
+ T+ + A LA +P L + A Y+R ++
Sbjct: 833 KHCAIKVSSAFPTVRYQTAVVLASMIPICLLVQEDARCYQRQQEA 877
>UniRef50_Q868S4 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 973
Score = 45.6 bits (103), Expect = 0.002
Identities = 36/151 (23%), Positives = 56/151 (37%), Gaps = 1/151 (0%)
Frame = +1
Query: 97 RRLGLEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHF 276
+++ LE+A +K+E + + ++ VG I LKYLG+++D R F H
Sbjct: 665 QQMRLEIAHKKTEFLIISSHKT--VQSGSIRVGDERIESIRHLKYLGVIIDDRLSFRKHV 722
Query: 277 GELVPKXXXXXXXXXXXXPNVGGCSAGVRRLYLGVVRSMALYGAPVWS-PXXXXXXXXXX 453
PN+GG + RRL V S Y A +W+
Sbjct: 723 EYACNNVFKAAISLIQIMPNIGGPKSSWRRLLADVAFSRLRYNAAIWAHVLVLKENRQLA 782
Query: 454 XXXXXXXXXXXXXGYRTISREVACALAGSLP 546
Y+TIS C +A +P
Sbjct: 783 NRVHRLLAMRVVRAYKTISHVAVCVIASMVP 813
>UniRef50_Q868R6 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1022
Score = 44.4 bits (100), Expect = 0.004
Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 6/179 (3%)
Frame = +1
Query: 178 ANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHFGELVPKXXXXXXXXXXXXPNVGGCSAG 357
+ +IV G +I LKYLG+++D R + H + + PN G +
Sbjct: 699 SQIIVEGHTIRSSRHLKYLGIMIDDRLEYTQHIKYVAERAVTNTNALVRMMPNRSGPRSS 758
Query: 358 VRRLYLGVVRSMALYGAPVWS-PXXXXXXXXXXXXXXXXXXXXXXXGYRTISREVACALA 534
RR+ + + Y + +W+ +R+ S + AC +A
Sbjct: 759 RRRIIANTIIAGIRYASSIWAESLKFECRKQWLRRCHRPLVNRVISAFRSTSHDAACVIA 818
Query: 535 GSLPWDLEAEVXAAVYRR-----XTQSLSRGRTPGPSAVGRWXRAARHLAYAXWRXRLL 696
G +P + + V +R + L+R P +V W R W RL+
Sbjct: 819 GMMPLHILIDEDYRVRQRSITTGVSSKLAR-IAERPYSVEAWQREWSTTTSGSWTRRLI 876
>UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TRAS3
protein - Bombyx mori (Silk moth)
Length = 1682
Score = 44.0 bits (99), Expect = 0.005
Identities = 36/145 (24%), Positives = 52/145 (35%), Gaps = 2/145 (1%)
Frame = +1
Query: 184 LIVGGVSITVQPKLKYLGLVLDSRWRFDHHFGELVPKXXXXXXXXXXXXPNVGGCSAGVR 363
L +GG I + +K LG+ +D++ F+ H + + G V
Sbjct: 1210 LNMGGTVIPMSEDIKILGVTVDNKLTFNAHVSNVCRRAIEVYKQLARAARASWGLHPEVI 1269
Query: 364 RL-YLGVVRSMALYGAPVW-SPXXXXXXXXXXXXXXXXXXXXXXXGYRTISREVACALAG 537
+L Y + + LY A VW S YRT+S A LAG
Sbjct: 1270 KLIYTATIEPIVLYAASVWVSAVAKLGVIKQLAAVQRGIAQKVCKAYRTVSLNSALILAG 1329
Query: 538 SLPWDLEAEVXAAVYRRXTQSLSRG 612
LP DL A++Y L G
Sbjct: 1330 MLPLDLRVREAASLYEAKKGQLLPG 1354
>UniRef50_Q868R8 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 988
Score = 43.6 bits (98), Expect = 0.007
Identities = 40/154 (25%), Positives = 57/154 (37%), Gaps = 4/154 (2%)
Frame = +1
Query: 97 RRLGLEVALRKSEAV--CFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDH 270
R +GLE+A +K+ + C H V P A L GG SI LKYLG+ L +
Sbjct: 686 RGVGLELAHQKTGFMIFCTHHV----PQLAELQAGGHSIQSTETLKYLGVDLCRKQHHSR 741
Query: 271 HFGELVPKXXXXXXXXXXXXPNVGGCSAGVRRLYLGVVRSMALYGAPVWS--PXXXXXXX 444
H + K PN G + RR + V S+ YG W
Sbjct: 742 HLERVANKASRITNALTCLMPNKRGPKSRSRRQLINVGNSIIRYGVATWGRWVLDKETHR 801
Query: 445 XXXXXXXXXXXXXXXXGYRTISREVACALAGSLP 546
++T+S + AC +A + P
Sbjct: 802 KSVQRAHRPGALRVASAFQTVSYDAACVVANTTP 835
>UniRef50_Q2H1R0 Cluster: Putative uncharacterized protein; n=5;
Chaetomium globosum|Rep: Putative uncharacterized protein
- Chaetomium globosum (Soil fungus)
Length = 1554
Score = 43.6 bits (98), Expect = 0.007
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Frame = +1
Query: 106 GLEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHFGEL 285
G+E KSE + F R P L + GV + ++LG+ LD + R+ H +
Sbjct: 1143 GMEFEPAKSELIHFSRARA--PIEKTLTIEGVELKPVEDARFLGVWLDRKLRYRAHLAAV 1200
Query: 286 VPKXXXXXXXXXXXXPNVGGCS-AGVRRLYLGVVRSMALYGAPVW 417
K GC+ A R +Y V+RS YGAP +
Sbjct: 1201 RKKMKTQICALTRLAAKTWGCTFARAREIYSKVIRSAIAYGAPAF 1245
>UniRef50_Q2GQK5 Cluster: Putative uncharacterized protein; n=3;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 446
Score = 43.2 bits (97), Expect = 0.009
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +1
Query: 106 GLEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHFGEL 285
G+E KSE + F R P L +GGV + ++LG+ LD + R+ H +
Sbjct: 126 GMEFEPAKSELIHFSRAR--VPIEKTLTIGGVELKPVEDARFLGVWLDRKLRYRAHLAAV 183
Query: 286 VPKXXXXXXXXXXXXPNVGGCS-AGVRRLYLGVVRSMALYGA 408
K GC+ A R +Y V+RS YGA
Sbjct: 184 RKKMKTQTCALTRLAAKTWGCTFARAREIYSKVIRSAIAYGA 225
>UniRef50_UPI00015B460B Cluster: PREDICTED: similar to Putative 115
kDa protein in type-1 retrotransposable element R1DM
(Putative 115 kDa protein in type I retrotransposable
element R1DM) (ORF 2); n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Putative 115 kDa protein in type-1
retrotransposable element R1DM (Putative 115 kDa protein
in type I retrotransposable element R1DM) (ORF 2) -
Nasonia vitripennis
Length = 680
Score = 40.7 bits (91), Expect = 0.046
Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 2/123 (1%)
Frame = +1
Query: 223 LKYLGLVLDSRWRFDHHFGELVPKXXXXXXXXXXXXPNVGGCSAGVRRLYL-GVVRSMAL 399
+KYLG+ + F H L + G ++Y+ G++ M +
Sbjct: 370 VKYLGVNVSMGMSFQVHVDGLRERVVKLIRLMKRVMRKDWGMRKKAVKVYVKGMIVPMIM 429
Query: 400 YGAPVWSPXXXXXXXXXXXXXXXXXXXXXXXGY-RTISREVACALAGSLPWDLEAEVXAA 576
YGA VWS RT+S E +AGSLPWDLE +A
Sbjct: 430 YGASVWSGELRKKKVCEELNRCQRYVLYASVRVCRTVSTEAMQVIAGSLPWDLECLRLSA 489
Query: 577 VYR 585
+Y+
Sbjct: 490 LYK 492
>UniRef50_UPI00015B4665 Cluster: PREDICTED: similar to Lian-Aa1
retrotransposon protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Lian-Aa1 retrotransposon protein -
Nasonia vitripennis
Length = 1153
Score = 40.3 bits (90), Expect = 0.061
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Frame = +1
Query: 106 GLEVALRKSEAVCF---HPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHF 276
GL V K+E V F + + + PP +GG IT+ + KYLG++LDS+ + +
Sbjct: 684 GLGVNPSKTELVLFTRKYKIPKFTPPR----IGGREITLSKEAKYLGIILDSKLTWKRNV 739
Query: 277 GELVPKXXXXXXXXXXXXPNVGGCSAG-VRRLYLGVVRSMALYGAPVW 417
E + K G + +Y +VR + YGA VW
Sbjct: 740 EERMKKGINAYYTCKKMFGKRWGLQPYIIHWMYTAIVRPVITYGALVW 787
>UniRef50_UPI00015B43EC Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 1119
Score = 40.3 bits (90), Expect = 0.061
Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Frame = +1
Query: 97 RRLGLEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHF 276
R GLE+A K V FH + + +S+ +K+LG+ LD R + H
Sbjct: 668 RERGLEIAPDKCVLVIFHDSNYNYYKDIQISINNISVGTSEHVKFLGMYLDRRLNWKKHI 727
Query: 277 GELVPKXXXXXXXXXXXXPNVGGCS-AGVRRLYLGVVRSMALYGAPVWSP 423
+ K G + + LY+ ++RS YG + SP
Sbjct: 728 SYVTDKCTSTMKILSCLRRTWWGADPSSLLHLYIALIRSRIEYGGFLISP 777
>UniRef50_Q17003 Cluster: Putative reverse transcriptase; n=29;
Culicidae|Rep: Putative reverse transcriptase - Anopheles
gambiae (African malaria mosquito)
Length = 1049
Score = 39.9 bits (89), Expect = 0.081
Identities = 28/109 (25%), Positives = 44/109 (40%)
Frame = +1
Query: 97 RRLGLEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHF 276
+R GL + + K V F R P + G ++ Q K LG++LDS F H
Sbjct: 804 KRNGLTICIEKCYCVSFSRCRS--PVTGTYFMDGTAVNRQNHAKDLGVLLDSSLNFKQHI 861
Query: 277 GELVPKXXXXXXXXXXXXPNVGGCSAGVRRLYLGVVRSMALYGAPVWSP 423
++V + ++ +Y +VRS+ Y VWSP
Sbjct: 862 DDVVARGNQLLGVVIRTTNEFRNPMC-IKAVYNCIVRSVLEYSCVVWSP 909
>UniRef50_Q8C4T4 Cluster: 10 days neonate cerebellum cDNA, RIKEN
full-length enriched library, clone:B930093C12
product:inferred: KE03 protein (Homo sapiens), full
insert sequence; n=1; Mus musculus|Rep: 10 days neonate
cerebellum cDNA, RIKEN full-length enriched library,
clone:B930093C12 product:inferred: KE03 protein (Homo
sapiens), full insert sequence - Mus musculus (Mouse)
Length = 197
Score = 38.7 bits (86), Expect = 0.19
Identities = 36/109 (33%), Positives = 42/109 (38%), Gaps = 5/109 (4%)
Frame = +3
Query: 213 PAEAQIFGPCAGQSMALRPPLW*VSPEAAGDGGR-TSPSSPQRRWLQRRRPASVPGGRAQ 389
P E P G L PL P AG G R T+P PQ R PA PG AQ
Sbjct: 42 PQEGGQACPALGPPRCLLAPLTSRCPRCAGSGERSTNPPRPQERPTHAAAPAHAPGSSAQ 101
Query: 390 YGFVRRSRV----VARTLCAQCSFAATSAAGARGESHQGVPYDLPGGRL 524
RSR+ V A + +GA GE+ P GGR+
Sbjct: 102 PSAQPRSRLQQPCVPELRRAAAAGYGVVRSGAGGEAAASAP---GGGRV 147
>UniRef50_O18558 Cluster: Lian-Aa1 retrotransposon protein; n=1;
Aedes aegypti|Rep: Lian-Aa1 retrotransposon protein -
Aedes aegypti (Yellowfever mosquito)
Length = 1189
Score = 38.7 bits (86), Expect = 0.19
Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = +1
Query: 97 RRLGLEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHF 276
R+ GL V K+ V F RR L + G I V ++KY+G++LDS+ + H
Sbjct: 677 RQYGLSVNPNKTSIVLFTE-RRNRDGIRPLRLFGTEINVTDQVKYVGVILDSKLLWTAHI 735
Query: 277 GELVPKXXXXXXXXXXXXPNVGGCSAG-VRRLYLGVVRSMALYGAPVW 417
V K G ++ +Y VVRS+ YG W
Sbjct: 736 DFRVKKACMAFGQCRQTFGKTWGLKPKYIKWIYTTVVRSILAYGCVWW 783
>UniRef50_Q03277 Cluster: Retrovirus-related Pol polyprotein from
type-1 retrotransposable element R1 (Retrovirus-related
Pol polyprotein from type I retrotransposable element R1)
[Includes: Reverse transcriptase (EC 2.7.7.49);
Endonuclease]; n=1; Bradysia coprophila|Rep:
Retrovirus-related Pol polyprotein from type-1
retrotransposable element R1 (Retrovirus-related Pol
polyprotein from type I retrotransposable element R1)
[Includes: Reverse transcriptase (EC 2.7.7.49);
Endonuclease] - Sciara coprophila (Fungus gnat)
Length = 1004
Score = 38.7 bits (86), Expect = 0.19
Identities = 34/126 (26%), Positives = 45/126 (35%), Gaps = 2/126 (1%)
Frame = +1
Query: 190 VGGVSITVQPKLKYLGLVLDSRWRFDHHFGELVPKXXXXXXXXXXXXPNVGGCSAGVRR- 366
+ G SI+ + ++K+LG+ + R F HF L K G
Sbjct: 699 LNGTSISYKSEVKHLGIFVAERMNFRPHFVYLRGKILGLVGCLRRVMRKSWGLGRRATCI 758
Query: 367 LYLGVVRSMALYGAPVWSPXXXXXXXXXXXXXXXXXXXXXXXGY-RTISREVACALAGSL 543
LY G+ + YGA VW RT+S E L G L
Sbjct: 759 LYKGLFVACMSYGASVWFRTLRFSYASILLNRCQRLVLYASLNVCRTVSTERMQVLHGEL 818
Query: 544 PWDLEA 561
PWDLEA
Sbjct: 819 PWDLEA 824
>UniRef50_Q4F8P9 Cluster: Reverse transcriptase; n=2; Aedes
aegypti|Rep: Reverse transcriptase - Aedes aegypti
(Yellowfever mosquito)
Length = 820
Score = 38.3 bits (85), Expect = 0.25
Identities = 24/105 (22%), Positives = 48/105 (45%)
Frame = +1
Query: 109 LEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHFGELV 288
+ +++ K + + F+ R+ P + G +I +++ LG+ LD + F++HF ++V
Sbjct: 598 MTLSIEKCQVISFN--RKRNPIHFQYTLSGTAIERVQRVRDLGVWLDEEFTFNYHFNDIV 655
Query: 289 PKXXXXXXXXXXXXPNVGGCSAGVRRLYLGVVRSMALYGAPVWSP 423
+ +R LY +VRS+ + A VW P
Sbjct: 656 SRANKQLGFVLKVTEGFSDPLC-LRSLYCALVRSILEFAAIVWCP 699
>UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase from
transposon X-element; n=1; Drosophila melanogaster|Rep:
Probable RNA-directed DNA polymerase from transposon
X-element - Drosophila melanogaster (Fruit fly)
Length = 908
Score = 38.3 bits (85), Expect = 0.25
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +1
Query: 97 RRLGLEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHF 276
RR + + KS VCF RR PPP + + V + KYLG++LD R F H
Sbjct: 706 RRWNIGINSSKSNNVCFTLKRRTPPP---VYIEEVPVPQPNAAKYLGVLLDRRLTFSKHV 762
Query: 277 GEL 285
++
Sbjct: 763 TDI 765
>UniRef50_Q2GMP6 Cluster: Putative uncharacterized protein; n=2;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 747
Score = 37.9 bits (84), Expect = 0.33
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Frame = +1
Query: 106 GLEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHFGEL 285
G+E KSE + F R P L +GGV + ++LG+ LD + R+ H +
Sbjct: 474 GMEFEPAKSELIHFSRARA--PIEKTLTIGGVELKPVEDARFLGVWLDRKLRYRAHLAAV 531
Query: 286 VPKXXXXXXXXXXXXPNVGGCS-AGVRRLYLGVVRS 390
K GC+ A R +Y V+RS
Sbjct: 532 RKKMKTQTCALTRLAAKTWGCTFARAREIYSKVIRS 567
>UniRef50_UPI00015B486D Cluster: PREDICTED: similar to Lian-Aa1
retrotransposon protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Lian-Aa1 retrotransposon protein -
Nasonia vitripennis
Length = 492
Score = 36.7 bits (81), Expect = 0.75
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = +1
Query: 130 SEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHFGELVPKXXXXX 309
S +C + + P G L GV + + ++KYLG+ LD++ + H + K
Sbjct: 100 SVMLCTNKYKTKPMEGLQL--HGVPLKLVKEVKYLGVTLDAKLNWGKHIKDKCEKAIGTF 157
Query: 310 XXXXXXXPNVGGCSAG-VRRLYLGVVRSMALYGAPVW 417
N G VR LY +++ YG VW
Sbjct: 158 WACGRAFGNTWGLEPDKVRWLYDAIIKPRLTYGTLVW 194
>UniRef50_Q7NJI5 Cluster: Gll1847 protein; n=1; Gloeobacter
violaceus|Rep: Gll1847 protein - Gloeobacter violaceus
Length = 329
Score = 36.7 bits (81), Expect = 0.75
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = -1
Query: 684 PPXGVRQMTXSTXPPTDSRRAGRPSPTQGLCXAPVYRSXYLSLEIPRKGTSEGAGDLPGD 505
P VR + ++ P R A RP P +GL RS + LE+ +E AG LPGD
Sbjct: 227 PTGAVRSLVAASPNPDSGRVAVRPGPQRGLGVVLDARSLTV-LEVQPGSAAERAGLLPGD 285
Query: 504 RTVPPDDSHREH 469
+ + D+ E+
Sbjct: 286 QLLGVGDAGLEN 297
>UniRef50_UPI0000E813AF Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 276
Score = 35.9 bits (79), Expect = 1.3
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = -3
Query: 394 PYCARPPGTDAGRRRCNHRRWGEDGLVRP------PSPAASGLTHQSGGRSA 257
P A P G A RRRC +R +RP P PA +G H +GGR A
Sbjct: 154 PSAAPPGGGSAPRRRCAFKRGPGASCLRPGAAPGGPGPAVAGQPHTAGGRRA 205
>UniRef50_UPI0000E47148 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 810
Score = 35.9 bits (79), Expect = 1.3
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = +1
Query: 157 RRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHFGELVPKXXXXXXXXXXXXPN 336
R+ P N +G + YLG+ + + + HH + K N
Sbjct: 593 RKQKPIILNYTMGDEVLAAVSSQSYLGMEIHEKLSWKHHIKAVAAKANRTLGFIRR---N 649
Query: 337 VGGCSAGVRR-LYLGVVRSMALYGAPVWSP 423
+ CS+ +++ Y +VRS YGA +W P
Sbjct: 650 LSLCSSAIKKQAYTTLVRSQLEYGAAIWDP 679
>UniRef50_Q2IEV0 Cluster: Putative uncharacterized protein; n=1;
Anaeromyxobacter dehalogenans 2CP-C|Rep: Putative
uncharacterized protein - Anaeromyxobacter dehalogenans
(strain 2CP-C)
Length = 197
Score = 35.9 bits (79), Expect = 1.3
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = -2
Query: 287 TNSPKWWSKRHRLSSTRPKYLSFGWTVIDTPPTMRFAPGGGPLRTG*KHTASDLRRATSR 108
+++P WS R +ST P+ T I PP A RTG + S RRAT
Sbjct: 3 SSAPAGWSAPSRSASTSPRAAPARRTAIRPPPKSPTASAAAGARTGVRSPGSSGRRATGA 62
Query: 107 P 105
P
Sbjct: 63 P 63
>UniRef50_Q7SES2 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 685
Score = 35.5 bits (78), Expect = 1.7
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 7/101 (6%)
Frame = -1
Query: 621 GRPSPTQGLCXAPVYRSXYLSLEIPRK--GTSEGAGDLPGD--RTVPPDDSHREHPLRS* 454
GR S + L AP YR Y PRK G G G +P + R P +++R +P
Sbjct: 322 GRSSASIDLADAPYYRDLYAHFAQPRKPSGPGPGPGAVPDNDSRATPFTNTNRYNPQEQT 381
Query: 453 QQSCIARRECG---RPHGSAVQSHTAHDPQVQTPDAGAATT 340
+ +R G P S + S H P PD +T
Sbjct: 382 HRKWKKQRPSGIIFLPSSSDIPSSPIHHPH-SGPDPDPVST 421
>UniRef50_Q2HA60 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 417
Score = 35.5 bits (78), Expect = 1.7
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Frame = -1
Query: 552 IPRKGTSEGA-GDLPGDRTVPPDDSHREHPLRS*QQSCI---ARRECGRPHGSAVQSHT- 388
+PR TS A G P +T D+ R L++ + + RRE G+ S H
Sbjct: 1 MPRDATSSSAAGPRPPSKT--RDEEDRRPTLKAKKAEALLHHGRRESGKSISSEGSIHVK 58
Query: 387 AHDPQVQTPDAGAATTDVGE 328
+ DP V+ PDA + TD E
Sbjct: 59 SEDPDVEMPDAAPSVTDTSE 78
>UniRef50_Q55WM6 Cluster: Protein STU1; n=2; Filobasidiella
neoformans|Rep: Protein STU1 - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 1242
Score = 35.5 bits (78), Expect = 1.7
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +2
Query: 503 RSPGRSPAPSLVPFLGI--SRLRXQLRYTGAXHSP*VGDGRPA 625
RSP +SP+PSL P LG+ S LR L Y A VG+G+ A
Sbjct: 694 RSPPKSPSPSLSPSLGLGESPLRQVLTYPAANGRHSVGEGKRA 736
>UniRef50_O46180 Cluster: Non-LTR retrotransposon reverse
transcriptase; n=2; Drosophila subobscura|Rep: Non-LTR
retrotransposon reverse transcriptase - Drosophila
subobscura (Fruit fly)
Length = 467
Score = 35.1 bits (77), Expect = 2.3
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Frame = +1
Query: 106 GLEVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHFGEL 285
GL + K+E V F + P I+ G ++ YLGLV+D + ++ +
Sbjct: 337 GLGINPSKTELVLFTTKYKIPSLNPP-ILNGCRLSFSDSASYLGLVIDKKLSWNLSIKDR 395
Query: 286 VPKXXXXXXXXXXXXPNVGGCSAG-VRRLYLGVVRSMALYGAPVW 417
V K G + V+ +YL +VR + LYG VW
Sbjct: 396 VKKATIALYTCKKAIGLKWGMNPRIVQWIYLAIVRPILLYGVAVW 440
>UniRef50_A6R8Y2 Cluster: Predicted protein; n=5; Onygenales|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 1913
Score = 35.1 bits (77), Expect = 2.3
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Frame = +1
Query: 97 RRLGLEVALRKSEAVCFHPVRRGPPPGAN--LIVGGVSITVQPKLKYLGLVLDSRWRFDH 270
RR G + A K E V F R P + L + ++ P +YLG+ +D++ R+D+
Sbjct: 1349 RRHGSQFAPAKYELVHF---TRDPKANSTHALRLPHATVEASPSCRYLGVHMDTKLRWDY 1405
Query: 271 HFGELVPKXXXXXXXXXXXXPNVGGCSA-GVRRLYLGVVRSMALYGAPVW 417
H ++ + G A +R++Y ++ LYG W
Sbjct: 1406 HREKVEAGATKRLSALSALASSTWGTGAINLRQVYRAMIIPQMLYGCSAW 1455
>UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 494
Score = 34.7 bits (76), Expect = 3.0
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Frame = +1
Query: 112 EVALRKSEAVCFHPVRRGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHFGELVP 291
++ L K++A+ F +R N+++ +I ++KY+GL LD+ + H
Sbjct: 305 KINLNKTQAILF--TKRRASQHQNILINNQAIEWIKQIKYMGLTLDTSLTYKTHLINAAN 362
Query: 292 KXXXXXXXXXXXXPNVGGCS-AGVRRLYLGVVRSMALYGAPVW 417
K + A R LYL +R + Y +P W
Sbjct: 363 KTKSALKSLNSLLCRKTHLNLANKRLLYLSTLRPILSYASPCW 405
>UniRef50_Q4RKK1 Cluster: Chromosome 21 SCAF15029, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 21
SCAF15029, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1246
Score = 34.7 bits (76), Expect = 3.0
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 507 DRTVPPDDSHREH--PLRS*QQSCIARRECGRPHGSAVQSHTAHDPQVQTPDAGAATTDV 334
D+TV PDD+ R + Q + A E HG+A QSH A P P GA TT +
Sbjct: 233 DQTVAPDDAPRAPIATIPELQMNSAASEESISAHGNATQSHLA--PTATAP-TGAQTTPI 289
Query: 333 G 331
G
Sbjct: 290 G 290
>UniRef50_A5NPD0 Cluster: Aldehyde dehydrogenase; n=2;
Proteobacteria|Rep: Aldehyde dehydrogenase -
Methylobacterium sp. 4-46
Length = 502
Score = 34.7 bits (76), Expect = 3.0
Identities = 27/80 (33%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = -2
Query: 635 TADGPGVRPRLRDCVXRRYTA-AXTSASRSQGREPARA-QATSREIVRYPLMTLTASTRC 462
T DG G P+ R +A A T S S PA A S R+PL+ +T RC
Sbjct: 316 TLDGQGRGPKRSGTARVRSSARASTCCSGSPSAAPAAAGSCVSPSTQRFPLLPITRPRRC 375
Query: 461 ARSSKAALRAESAGDHTGAP 402
+ K LR + G AP
Sbjct: 376 GKRRKLPLRLK--GPRNPAP 393
>UniRef50_Q4PCH7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 523
Score = 34.7 bits (76), Expect = 3.0
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = -2
Query: 347 QPPTLGRRRASAPA--IPSSFGTNSPKWWSKRHRLSS-TRPKYLSFGWTVIDTPPTMRFA 177
QPP+L R +AP PS G N S+ RLSS T P +S + P +A
Sbjct: 126 QPPSLPPRTYTAPQSPTPSQSGANRASLESRHSRLSSITSP--VSPSPSSASAPA---YA 180
Query: 176 PGGGPLRTG*KHTASDLRRATSRPNLRMRLTTVET 72
P GP + ++ R + RPN R TTV T
Sbjct: 181 PPSGPPPSSPATSSYTASRPSQRPNDSYRPTTVPT 215
>UniRef50_Q45W67 Cluster: Polyprotein; n=1; Phanerochaete
chrysosporium RP-78|Rep: Polyprotein - Phanerochaete
chrysosporium RP-78
Length = 1121
Score = 34.7 bits (76), Expect = 3.0
Identities = 38/120 (31%), Positives = 47/120 (39%), Gaps = 13/120 (10%)
Frame = +1
Query: 97 RRLGLEVALRKSEAVCFHPVRR--------GPPPGANLIV--GGVSITVQPK--LKYLGL 240
RR+GL V K E + F RR P G L V G + T+ PK ++YLG
Sbjct: 303 RRMGLAVETDKLELMHFTRRRRKKGWKWSDNHPLGPVLKVTDGDTTHTITPKATMRYLGF 362
Query: 241 VLDSRWRFDHHFGELVPKXXXXXXXXXXXX-PNVGGCSAGVRRLYLGVVRSMALYGAPVW 417
LD R F H K N G RRLY+ V + YGA +W
Sbjct: 363 WLDPRLTFREHIRFYTVKGCSSVAALRMLGNSNRGLTPKDKRRLYIANVIPLLTYGAQLW 422
>UniRef50_Q9NBI5 Cluster: Reverse transcriptase; n=7;
Drosophila|Rep: Reverse transcriptase - Drosophila
palustris
Length = 359
Score = 34.3 bits (75), Expect = 4.0
Identities = 32/134 (23%), Positives = 48/134 (35%), Gaps = 2/134 (1%)
Frame = +1
Query: 190 VGGVSITVQPKLKYLGLVLDSRWRFDHHFGELVPKXXXXXXXXXXXXPNVGGCSA-GVRR 366
+ GV++ ++KYLG+ F F L + N G S +R
Sbjct: 55 LNGVNLRYVCEVKYLGIYFWREVVFHSDFAGLSQRLLGVVDKVRRILRNEWGLSRRAIRT 114
Query: 367 LYLGVVRSMALYGAPVW-SPXXXXXXXXXXXXXXXXXXXXXXXGYRTISREVACALAGSL 543
+Y G+ + A YG+ VW S RT+S E L G
Sbjct: 115 IYDGLFVACAAYGSSVWCSAVTTVAGRAKVLACQRVIMLGCMPVCRTVSTEAMQVLLGVT 174
Query: 544 PWDLEAEVXAAVYR 585
P DLE A +++
Sbjct: 175 PLDLEVRRRAVLFK 188
>UniRef50_UPI0001555862 Cluster: PREDICTED: similar to Fragile X
mental retardation, autosomal homolog 2, partial; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to
Fragile X mental retardation, autosomal homolog 2,
partial - Ornithorhynchus anatinus
Length = 753
Score = 33.9 bits (74), Expect = 5.3
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 6/68 (8%)
Frame = -3
Query: 418 TTRERRTKPYCARPPGTDAGRRRCNHRRWGEDGLVRP--PSPAASGLTH----QSGGRSA 257
T E T+ P A RRR RR EDG V P P GL + GGR +
Sbjct: 623 TEPEPLTEADAGEAPPASARRRRSRRRRTDEDGTVMDGGPEPDGPGLAENGLGEPGGRPS 682
Query: 256 IDCPAQGP 233
P +GP
Sbjct: 683 FRPPRRGP 690
>UniRef50_UPI000058923D Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 289
Score = 33.9 bits (74), Expect = 5.3
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = +1
Query: 169 PPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHFGELVPKXXXXXXXXXXXXPNVGGC 348
PP N G + YLG+ +D++ R+D HF +L K N+ C
Sbjct: 127 PPNRNYTFCGQPLQEVSSYPYLGVEIDNKLRWDTHFTKLTSK---ANKVLGFLRKNLWFC 183
Query: 349 SAGVRR-LYLGVVRSMALYGAPVWSP 423
+ + Y +VR + Y + W P
Sbjct: 184 TKATKESAYKTLVRPILEYASSSWDP 209
>UniRef50_A7SEJ9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 2423
Score = 33.9 bits (74), Expect = 5.3
Identities = 19/73 (26%), Positives = 30/73 (41%)
Frame = +3
Query: 282 VSPEAAGDGGRTSPSSPQRRWLQRRRPASVPGGRAQYGFVRRSRVVARTLCAQCSFAATS 461
+SP +G G+TS R+ +R+RP + + R R T+C T
Sbjct: 1634 ISPARSGQSGKTSNKQSPRQTSRRKRP-NTEEVDLSHKLTNRKRQRKVTVCGPSGVQTTH 1692
Query: 462 AAGARGESHQGVP 500
A + E G+P
Sbjct: 1693 AKSSESEKRHGLP 1705
>UniRef50_Q2S4I7 Cluster: Putative uncharacterized protein; n=1;
Salinibacter ruber DSM 13855|Rep: Putative
uncharacterized protein - Salinibacter ruber (strain DSM
13855)
Length = 378
Score = 33.5 bits (73), Expect = 7.0
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = -3
Query: 385 ARPPGTDAGRRRCNHRRWGEDGLVRPPSPAASGLTHQSGGRSAIDCP 245
ARP GRR R G PP+PA+ G + G R DCP
Sbjct: 214 ARPAPARFGRRPAG-RHGGRQFAFVPPAPASRGSLRRRGSRRVCDCP 259
>UniRef50_O44317 Cluster: Reverse transcriptase; n=1; Dugesiella
sp.|Rep: Reverse transcriptase - Dugesiella sp
Length = 488
Score = 33.5 bits (73), Expect = 7.0
Identities = 27/118 (22%), Positives = 39/118 (33%), Gaps = 1/118 (0%)
Frame = +1
Query: 205 ITVQPKLKYLGLVLDSRWRFDHHFGELVPKXXXXXXXXXXXX-PNVGGCSAGVRRLYLGV 381
+ ++ +KYLG+ S F H + K N G +RR+Y V
Sbjct: 67 VKLEQHVKYLGITYSSDGTFKEHQRRIDSKIRKLNNKIRSIRIGNRGLPGEKMRRIYKTV 126
Query: 382 VRSMALYGAPVWSPXXXXXXXXXXXXXXXXXXXXXXXGYRTISREVACALAGSLPWDL 555
+ + YGA W+ YRT S E +A P DL
Sbjct: 127 IEKIISYGANTWTKALGSVEKKKLNSLQRTMLLSVTEAYRTTSTEAMQVIANITPLDL 184
>UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria
glabrata|Rep: Pol-like protein - Biomphalaria glabrata
(Bloodfluke planorb)
Length = 1222
Score = 33.5 bits (73), Expect = 7.0
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = +1
Query: 160 RGPPPGANLIVGGVSITVQPKLKYLGLVLDSRWRFDHHFGELVPKXXXXXXXXXXXXPNV 339
RG P L + I V K+LGL LDS++ F H EL K
Sbjct: 714 RGLHPDPELFIHKKKIPVVKTTKFLGLTLDSKFNFLPHIKELKKKCQKSLNILRVLSHTD 773
Query: 340 GGCSAG-VRRLYLGVVRSMALYGAPVW 417
G + LY ++RS YG+ ++
Sbjct: 774 WGADRDTLLLLYRSLIRSKLDYGSIIY 800
>UniRef50_Q2U3Z5 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 629
Score = 33.5 bits (73), Expect = 7.0
Identities = 30/108 (27%), Positives = 42/108 (38%)
Frame = -1
Query: 681 PXGVRQMTXSTXPPTDSRRAGRPSPTQGLCXAPVYRSXYLSLEIPRKGTSEGAGDLPGDR 502
P V+++ P S A P P+ AP RS L++ PRK
Sbjct: 123 PVEVQRLEPDRTSPRRSLTARSPVPSMERTGAPPRRSESLNVRPPRK------------E 170
Query: 501 TVPPDDSHREHPLRS*QQSCIARRECGRPHGSAVQSHTAHDPQVQTPD 358
++P D R HPL + R PH S +Q H+ H Q + D
Sbjct: 171 SLPRTDIERIHPLH-----MVGRNPALLPHFSQLQRHSVHGSQRREND 213
>UniRef50_UPI00015B47C2 Cluster: PREDICTED: similar to ORF2-encoded
protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to ORF2-encoded protein - Nasonia vitripennis
Length = 1013
Score = 33.1 bits (72), Expect = 9.3
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +1
Query: 196 GVSITVQPKLKYLGLVLDSRWRFDHHFGELVPKXXXXXXXXXXXXPNVGGCSAG 357
G I QP +KYLG+ + +R F + + K PNVGG + G
Sbjct: 960 GYKIDSQPTIKYLGIAMVARLTFKQYLERVSNKAAKVDSVLSRLIPNVGGPTQG 1013
>UniRef50_UPI00006C0AAE Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 276
Score = 33.1 bits (72), Expect = 9.3
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 403 RTKPYCARPPGTDAGRRRC-NHRRWGEDGLVRPPSPAAS 290
RT + A PP T+ RRRC H ++G+ G PPSP S
Sbjct: 37 RTGLFLAAPPRTEVTRRRCPRHPQFGDRG---PPSPGDS 72
>UniRef50_Q4SPL1 Cluster: Chromosome 16 SCAF14537, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 16 SCAF14537, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 380
Score = 33.1 bits (72), Expect = 9.3
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +3
Query: 324 SSPQRRWLQRRRPASVPGGRAQYGFVRRSRVVARTLCAQC---SFAATSAAGARGESHQG 494
+S +RRW RR + G R + G RSR ++ C +S AGA ES G
Sbjct: 13 TSARRRWEAGRRAEELRGSRGKRGGEDRSRNPMKSDALSCLGRRKRESSRAGAARESEGG 72
Query: 495 VPYDLPGGR 521
P L G R
Sbjct: 73 EPTSLRGHR 81
>UniRef50_Q9HX73 Cluster: Putative uncharacterized protein; n=7;
Pseudomonas aeruginosa group|Rep: Putative
uncharacterized protein - Pseudomonas aeruginosa
Length = 531
Score = 33.1 bits (72), Expect = 9.3
Identities = 22/58 (37%), Positives = 27/58 (46%)
Frame = +3
Query: 213 PAEAQIFGPCAGQSMALRPPLW*VSPEAAGDGGRTSPSSPQRRWLQRRRPASVPGGRA 386
P +I G C + RP W V+P G+ G +P P R L RRR A GRA
Sbjct: 281 PELQRIHGLCRAPRLPARP--WRVAP---GEPGNDNPGLPLRPLLHRRRSAQRMDGRA 333
>UniRef50_A5P172 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Rep:
LigA - Methylobacterium sp. 4-46
Length = 673
Score = 33.1 bits (72), Expect = 9.3
Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = +3
Query: 306 GGRTSPSSPQRRWLQRR-RPAS--VPGGRAQYGFVRRSRVVARTLCAQCSFAATSAAGAR 476
GGR + RR RR RPA P RA+ G RR R R + A A AR
Sbjct: 522 GGRGDRGAEPRRGAGRRSRPAPGRPPALRARPGDARRDRRARRDRAGAGAHRALGARPAR 581
Query: 477 GESHQGVPYDLPGGRLRPR 533
+ + PGG RPR
Sbjct: 582 ADRPRRAAPRRPGGAERPR 600
>UniRef50_A5ESH3 Cluster: Putative uncharacterized protein; n=2;
Bradyrhizobiaceae|Rep: Putative uncharacterized protein
- Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
Length = 588
Score = 33.1 bits (72), Expect = 9.3
Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +3
Query: 300 GDG-GRTSPSSPQRRWLQRRRPASVPGGRAQYGFVRRSRVVARTLCAQCSFAATSAAGAR 476
GDG GR + S P +Q R A PG RA +GF V + A S +A + GA
Sbjct: 179 GDGTGRLAVSRPSPTSVQLREDAD-PGARANFGFTLAGAAVVSSSFATVSHSAGTIDGAV 237
Query: 477 GESHQGVPYDLPGGRLR 527
+ Q LP R R
Sbjct: 238 PQFAQA---PLPSDRFR 251
>UniRef50_Q9FRD0 Cluster: Putative uncharacterized protein
OSJNBa0013M12.20; n=1; Oryza sativa|Rep: Putative
uncharacterized protein OSJNBa0013M12.20 - Oryza sativa
(Rice)
Length = 186
Score = 33.1 bits (72), Expect = 9.3
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = +3
Query: 333 QRRWLQRRRPASVPGGRAQYGFVRRSRVVARTLCAQCSFAATSAAGARGESHQGVPYDLP 512
+RRW RR GGR Q G V R + VA A+ + A S G + + P
Sbjct: 2 RRRWAALRRALDSAGGRTQLGAVGRRQAVAE--AARGHWLALSDGGGGEQDEEDAPVKGG 59
Query: 513 GG 518
GG
Sbjct: 60 GG 61
>UniRef50_Q55WZ7 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 437
Score = 33.1 bits (72), Expect = 9.3
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = -3
Query: 403 RTKPYCARPPGTDAGRRRCNHRRWGEDGLVRPPSPAASGLTHQSGGRSAIDCPAQGP 233
R + Y R P D G R R G DGL P P A H+S RS ++ P
Sbjct: 169 RAEDYYGREPRGDGGVPRGRDGRDGRDGLPTRPYPPARSPRHRSRSRSRSRSRSRSP 225
>UniRef50_Q07851 Cluster: Regulatory protein E2; n=2; Human
papillomavirus - 4|Rep: Regulatory protein E2 - Human
papillomavirus type 65
Length = 402
Score = 33.1 bits (72), Expect = 9.3
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = -3
Query: 430 RVRATTRERRTKPYCARPPGTDAGRRRCNHRRWGEDGLVRPPSPAASGLTHQSGGRSAI 254
RVR R+R++ P P T + RRR R GE L PSP G+ H++ R +
Sbjct: 254 RVRRGRRQRKSGP---GPGETPSKRRRGGGRGGGETRLESAPSPGEVGIRHRTVERQGL 309
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 756,491,639
Number of Sequences: 1657284
Number of extensions: 16966716
Number of successful extensions: 61042
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 55942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60915
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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