Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_G04
         (861 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.58 
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    25   1.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.3  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   7.2  
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      21   9.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 613  RTPGPSAVGRWXRAARHLAY 672
            + PGP   G + RAA  LAY
Sbjct: 1660 KAPGPGQAGEYTRAAGFLAY 1679


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 441 CSFAATSAAGARGESHQGVPYDLP 512
           C+++A S+A      HQ VPY  P
Sbjct: 148 CNYSAYSSASRHHVDHQPVPYLTP 171


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 634 VGRWXRAARHLAYAXWR 684
           VG W RA R   Y  W+
Sbjct: 134 VGTWIRAVRKCLYKLWK 150


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 634 VGRWXRAARHLAYAXWR 684
           VG W RA R   Y  W+
Sbjct: 134 VGTWIRAVRKCLYKLWK 150


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 433 QRVRATTRERRTKPYCARP 377
           +R RAT  +RR +P   RP
Sbjct: 316 ERPRATDHQRRNEPKRPRP 334


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 247 DSRWRFDHHFGELV 288
           DS+WR +H  G +V
Sbjct: 15  DSKWRGEHMVGTIV 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,600
Number of Sequences: 336
Number of extensions: 3759
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)