Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_G04
         (861 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC026693-1|AAH26693.1|  343|Homo sapiens TMBIM1 protein protein.       33   1.8  
AK128230-1|BAC87340.1|  120|Homo sapiens protein ( Homo sapiens ...    32   2.3  
AE006465-4|AAK61258.1|  402|Homo sapiens unknown protein.              31   5.4  
AK026133-1|BAB15372.1|  380|Homo sapiens protein ( Homo sapiens ...    31   7.1  
BC125040-1|AAI25041.1|  206|Homo sapiens FOXR1 protein protein.        30   9.4  

>BC026693-1|AAH26693.1|  343|Homo sapiens TMBIM1 protein protein.
          Length = 343

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 667 PDDXQHASTDRQPTGRASVPDSGTVXCAGIPQLXPQPRDPKE 542
           P+D QH+     P+G A VP +G         + PQP  P E
Sbjct: 2   PEDLQHSEARNAPSGTAQVPAAGVPPQPVSSHVQPQPPPPYE 43


>AK128230-1|BAC87340.1|  120|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46363 fis, clone TESTI4050954. ).
          Length = 120

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = -3

Query: 418 TTRERRTKPYCARPPGTDAGRRRCNHRRWGEDGLVRPPSPAASG 287
           T R  R  P+   P G  AG+RR +H RWG      P S    G
Sbjct: 71  TGRPGRDAPHL--PDGVSAGQRRSSHPRWGGGAEALPTSQTMGG 112


>AE006465-4|AAK61258.1|  402|Homo sapiens unknown protein.
          Length = 402

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 17/54 (31%), Positives = 21/54 (38%)
 Frame = -3

Query: 394 PYCARPPGTDAGRRRCNHRRWGEDGLVRPPSPAASGLTHQSGGRSAIDCPAQGP 233
           P    P G +  + R  H + G  G   PP PAAS      G    +  P  GP
Sbjct: 132 PPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPGLGP 185


>AK026133-1|BAB15372.1|  380|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22480 fis, clone HRC10841. ).
          Length = 380

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 320 PVFSPTSVVAAPASGVCTWGSCAVWLCTAL 409
           PV   TS V+APA G  +WG+   W  T L
Sbjct: 328 PVIISTSRVSAPAGGKASWGADRSWARTQL 357


>BC125040-1|AAI25041.1|  206|Homo sapiens FOXR1 protein protein.
          Length = 206

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
 Frame = -3

Query: 694 ATXPSXWRTPDDXQHASTDRQPTGRASVPDSGTV---XCAGIPQLXP 563
           A  PS W  P     AS  +QP G A VP    +    C GI +  P
Sbjct: 121 AFSPSTWEGPPPESEASASQQPGGEALVPAPSQLLPPNCPGIKKQFP 167


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,405,477
Number of Sequences: 237096
Number of extensions: 2768686
Number of successful extensions: 8621
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8619
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)