Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_F24
(918 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 99 6e-21
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 1e-17
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 72 6e-13
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 69 4e-12
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 64 1e-10
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-09
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 55 7e-08
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 4e-07
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 7e-07
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 50 2e-06
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 49 6e-06
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 48 1e-05
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 47 2e-05
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 44 2e-04
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 43 3e-04
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 42 5e-04
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 42 5e-04
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 42 7e-04
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.001
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 41 0.001
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 41 0.002
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 41 0.002
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 41 0.002
SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 40 0.002
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 40 0.003
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 39 0.007
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 38 0.009
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 38 0.011
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.015
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 38 0.015
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.026
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 37 0.026
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.035
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.046
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 36 0.061
SB_24012| Best HMM Match : RRM_1 (HMM E-Value=0.69) 36 0.061
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 36 0.061
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.080
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 34 0.14
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 33 0.43
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 32 0.75
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 31 0.99
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_3721| Best HMM Match : RRM_1 (HMM E-Value=3.1) 31 1.3
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 31 1.7
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 31 1.7
SB_41149| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 30 2.3
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 30 2.3
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 30 2.3
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 29 5.3
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 29 7.0
SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_14471| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 98.7 bits (235), Expect = 6e-21
Identities = 53/132 (40%), Positives = 75/132 (56%), Gaps = 2/132 (1%)
Frame = +3
Query: 108 MDDDEK-GKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPS 284
M + EK K+F+GGL+W T++E L+ YFS++G ++DCV+MK GRSRGFGFVT+
Sbjct: 43 MSESEKLRKIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMK--RDGRSRGFGFVTYESSD 100
Query: 285 LVNLVLQNGPHQLDGRTIDPKPCNPRTLQ-KPKRGGGYPKVFLGRAAIERYRNRSQXIFR 461
VN VL+ H LD R I+PK PR P+ K+F+G A + F
Sbjct: 101 SVNEVLKKKDHVLDDREIEPKRSVPRDESGAPEAMSKTRKIFVGGLASTTVEEDIKEYFN 160
Query: 462 TLWEGHGGGHYV 497
+L +G G +
Sbjct: 161 SLCRKNGMGEVI 172
Score = 48.8 bits (111), Expect = 6e-06
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Frame = +3
Query: 129 KLFVGGLSWETSQENLQRYFSRY------GEVIDCVVMKNSESG-RSRGFGFVTFADPSL 287
K+FVGGL+ T +E+++ YF+ GEVID + ++ ++ R RGF FVTF + +
Sbjct: 140 KIFVGGLASTTVEEDIKEYFNSLCRKNGMGEVIDVDLKRDRDNPKRIRGFAFVTFDNDEI 199
Query: 288 VNLVLQNGPHQLDGRTIDPKPCNPRTLQKPK 380
V V H++ + + K P++ + K
Sbjct: 200 VEKVCAMKYHEIRMKQCEVKKAEPQSAMRKK 230
Score = 39.9 bits (89), Expect = 0.003
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +1
Query: 409 LGGLPSNVTETDLXVFFGRYGKVMEVVIMYDQXKKKSXGFGFLSFEDEIXVERV 570
+GGL N TE L +F ++G +++ VIM + +S GFGF+++E V V
Sbjct: 54 IGGLNWNTTEEGLKDYFSQWGTIVDCVIM--KRDGRSRGFGFVTYESSDSVNEV 105
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 87.4 bits (207), Expect = 1e-17
Identities = 47/125 (37%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Frame = +3
Query: 111 DDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLV 290
++D + KLFVGGL+ ET+ E L+ YF YGE+ D VV+ +S + +SRGFG+VTFAD +
Sbjct: 9 NNDPRAKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVT 68
Query: 291 NLVL----QNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGRAAIERYRNRSQXIF 458
VL +NG H++DG+ ++ K PR K+F+G + + Q
Sbjct: 69 RNVLKDKVENGAHRIDGKEVEVKRAIPRDDNSATSHEKTKKIFVGGLPEDATKEDIQEAI 128
Query: 459 RTLWE 473
+L E
Sbjct: 129 ESLLE 133
Score = 44.8 bits (101), Expect = 1e-04
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +1
Query: 409 LGGLPSNVTETDLXVFFGRYGKVMEVVIMYDQXKKKSXGFGFLSFED 549
+GGL T L +F YG++ +VV++ D KKS GFG+++F D
Sbjct: 18 VGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFAD 64
Score = 42.3 bits (95), Expect = 5e-04
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = +3
Query: 99 NPDMDDDEKGKLFVGGLSWETSQENLQRYF-SRYGEVIDCV--VMKNSESGRSRGFGFVT 269
N ++ K+FVGGL + ++E++Q S E +D V +MK + + RGF FV
Sbjct: 99 NSATSHEKTKKIFVGGLPEDATKEDIQEAIESLLEEKVDKVDLIMKKEDETKHRGFAFVE 158
Query: 270 FADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGG 389
+ + + + G+ ++ K PR P GG
Sbjct: 159 LNNEDQADELCCVKKIHVKGKMVEAKKATPRDRNSPADGG 198
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 72.1 bits (169), Expect = 6e-13
Identities = 37/82 (45%), Positives = 51/82 (62%)
Frame = +3
Query: 114 DDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVN 293
DD+ GKLFVGGLS+ET++E+L+ YFS+YGE++ + ++ +GR RGF FV F
Sbjct: 25 DDDIGKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQF------- 77
Query: 294 LVLQNGPHQLDGRTIDPKPCNP 359
HQ + IDPKP P
Sbjct: 78 ------KHQSEADAIDPKPAAP 93
Score = 56.4 bits (130), Expect = 3e-08
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +3
Query: 129 KLFVGGLSWETSQENLQRYFSR-YGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQ 305
K+FVGGL ETS E ++ YF + Y V + + S R RGF FV+F V+ + +
Sbjct: 104 KIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICE 163
Query: 306 NGPHQLDGRTIDPKPCNPRTLQK 374
H ++G ++ K P+ +Q+
Sbjct: 164 TQFHNIEGNKVEVKRALPKEVQQ 186
Score = 39.1 bits (87), Expect = 0.005
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +1
Query: 409 LGGLPSNVTETDLXVFFGRYGKVMEVVIMYDQXKKKSXGFGFLSFEDEIXVERVTPRTLS 588
+GGL T+ L +F +YG+++ V I D + GF F+ F+ + + + P+ +
Sbjct: 33 VGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEADAIDPKPAA 92
Query: 589 XTSK 600
K
Sbjct: 93 PIGK 96
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 69.3 bits (162), Expect = 4e-12
Identities = 28/59 (47%), Positives = 45/59 (76%)
Frame = +3
Query: 156 ETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNGPHQLDGR 332
+ S E L+++F ++GE+ +CVVM++ + RSRGFGF+TF DP V++VL +G +LDG+
Sbjct: 118 QASAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGK 176
Score = 39.5 bits (88), Expect = 0.004
Identities = 14/26 (53%), Positives = 24/26 (92%)
Frame = +3
Query: 129 KLFVGGLSWETSQENLQRYFSRYGEV 206
K+F+GGLS TS+E++++YFS++G+V
Sbjct: 184 KIFIGGLSTNTSEEDMKKYFSQFGKV 209
Score = 39.1 bits (87), Expect = 0.005
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +1
Query: 457 FGRYGKVMEVVIMYDQXKKKSXGFGFLSFEDEIXVERV 570
F ++G++ E V+M D K+S GFGFL+F+D V+ V
Sbjct: 128 FEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVV 165
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 376 RNVAVDTLRCSLGGLPSNVTETDLXVFFGRYGKV 477
+ + T + +GGL +N +E D+ +F ++GKV
Sbjct: 176 KKMVTTTKKIFIGGLSTNTSEEDMKKYFSQFGKV 209
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 64.5 bits (150), Expect = 1e-10
Identities = 30/91 (32%), Positives = 53/91 (58%)
Frame = +3
Query: 114 DDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVN 293
D + KLFVGG+ +E+ + L+++F+++GE+ + VV+K+ + +S+G+GFVT A
Sbjct: 6 DTKFTKLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAE 65
Query: 294 LVLQNGPHQLDGRTIDPKPCNPRTLQKPKRG 386
L +N ++GR + KP RG
Sbjct: 66 LACKNKRPMIEGRQANVNLAYLGAKPKPTRG 96
Score = 42.3 bits (95), Expect = 5e-04
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +1
Query: 376 RNVAVDTLRCSLGGLPSNVTETDLXVFFGRYGKVMEVVIMYDQXKKKSXGFGFLS 540
RN + +GG+P + L FF ++G++ E V++ D+ KKS G+GF++
Sbjct: 3 RNQDTKFTKLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVT 57
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 59.7 bits (138), Expect = 3e-09
Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = +3
Query: 105 DMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF-ADP 281
D+ E+ K ++G L ++ ++ +LQ FSRY +V+D V+ + E+ R RGF FVTF +
Sbjct: 223 DLKMGEECKCYIGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKK 281
Query: 282 SLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGY 395
++ + + + + DGR++ R + RGGGY
Sbjct: 282 NMEDAINELDGQEFDGRSMKVNQARSREQRGGGRGGGY 319
Score = 38.3 bits (85), Expect = 0.009
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 219 VMKNSESGRSRGFGFVTFADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQ-KPKRGGG 392
V+ + E+GR RGFGFVTF ++ + + DG +D +P Q + +RGGG
Sbjct: 40 VITDRETGRPRGFGFVTFGSEDEMDKAID----KFDGEDLDGRPMKVNKAQPRGERGGG 94
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 58.0 bits (134), Expect = 1e-08
Identities = 37/98 (37%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Frame = +3
Query: 126 GKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQ 305
G L V GL + T++ ++ YF+R+GE+ C V + + RSRGFGFV F VL
Sbjct: 115 GDLIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLS 174
Query: 306 NGPHQLDGRTIDPKPCNPRTLQKPKRGGGYP-KVFLGR 416
H++ GR C R L +PK P K+F+GR
Sbjct: 175 TS-HRIQGRL-----CEVR-LPRPKEELNVPKKLFVGR 205
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +3
Query: 129 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFAD-PSLVNLVLQ 305
KLFVG L T+++ L YF+++GEV D + K R FGFVTFA + V++ +
Sbjct: 200 KLFVGRLPESTTEKTLMEYFAQFGEVTDVYIPK-----PFRHFGFVTFASVANCVSIAFE 254
Query: 306 N 308
N
Sbjct: 255 N 255
Score = 38.3 bits (85), Expect = 0.009
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +1
Query: 415 GLPSNVTETDLXVFFGRYGKVMEVVIMYDQXKKKSXGFGFLSFEDEIXVERV 570
GLP TE+++ +F R+G++ + D ++S GFGF+ F+ + + V
Sbjct: 121 GLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNV 172
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 57.2 bits (132), Expect = 2e-08
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = +3
Query: 249 RGFGFVTFADPSLVNLVLQNGPHQLDGRTIDPKPCNPR 362
+GFGFVTF DP+ + VL PH LDG+TIDPKP PR
Sbjct: 142 KGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPR 179
Score = 39.9 bits (89), Expect = 0.003
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 102 PDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEV 206
P GK+F+GGL++ T++E+L+ YFS YG V
Sbjct: 194 PQRGSANDGKVFIGGLAFGTTEEDLKEYFSTYGMV 228
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 55.2 bits (127), Expect = 7e-08
Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Frame = +3
Query: 102 PDMDDDEKGK--LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFA 275
P D EK +FVGGL+ T +E L+ YF ++GEV +M+ + G SR +GFV F
Sbjct: 70 PSPKDIEKNSRSVFVGGLASGTDEEGLKDYFEQFGEVESVRIMR-TFLGYSRNYGFVLFK 128
Query: 276 DPSLVNLVLQNGPHQLDGRTID-PKPCNPRTLQKPKRGGGYPKVFLGRAAIERYR 437
D VL+ H ++G+T+D K N R + GG P F + E ++
Sbjct: 129 DDGPSKEVLKKS-HVINGKTVDVGKSRNFRVIYV----GGLPSHFTEQTVREHFK 178
Score = 49.6 bits (113), Expect = 3e-06
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +3
Query: 132 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG 311
LFV LS +T + ++ RYF YG+V ++ + E+G+S+G G V P VN +L+
Sbjct: 321 LFVDNLSEDTKELDVLRYFRPYGQVAKVHILTDRETGKSKGCGVVKLRHPGTVNKILEEP 380
Query: 312 PH 317
H
Sbjct: 381 VH 382
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 129 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSE 236
KL V L ++T+ + L+ YF + GE+ ++ NSE
Sbjct: 237 KLMVQDLDFDTTVDELREYFEKCGELTGIDLLINSE 272
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 54.4 bits (125), Expect = 1e-07
Identities = 32/91 (35%), Positives = 44/91 (48%)
Frame = +3
Query: 120 EKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLV 299
E+ +F+G LS++ +E L +F G C V+ ++ GRSRGFG+ F N
Sbjct: 178 EEMSVFLGNLSFDADEETLAAFFEEKGLSATCRVI--TQEGRSRGFGYADFTSKEDYNKA 235
Query: 300 LQNGPHQLDGRTIDPKPCNPRTLQKPKRGGG 392
L+ GR I P N KP RGGG
Sbjct: 236 LELNGEDCCGREIRINPAN----SKPSRGGG 262
Score = 43.2 bits (97), Expect = 3e-04
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +3
Query: 132 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVL-QN 308
L V LS++T+ ++L F + V+ + ESG SRGFGFV + D VL +
Sbjct: 291 LIVRNLSYDTTTDSLGAAFEGCS---NAKVIFDRESGESRGFGFVDYDDVETAKKVLSEM 347
Query: 309 GPHQLDGRTIDPKPCNPRTLQKPKRGGG 392
++DGR + +PRT + RGGG
Sbjct: 348 AGAEVDGRQVRLDFASPRT-EGGGRGGG 374
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 52.8 bits (121), Expect = 4e-07
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Frame = +3
Query: 111 DDDEKGKLFVGGLSWETSQENLQRYFSRYGE----VIDCVVMKNSESGRSRGFGFVTFAD 278
DD + KLFVGGL+ +T++E ++ YF + E + V + + G+SR F FV F++
Sbjct: 3 DDSKLMKLFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKTPEGKSRKFCFVEFSN 62
Query: 279 PS--LVNLVLQNGPHQLDGRTIDPKPCNPR 362
S + N+V H +D + ++ K PR
Sbjct: 63 GSDIIDNIVFNFESHSIDNKQVEVKRAMPR 92
Score = 34.3 bits (75), Expect = 0.14
Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 2/124 (1%)
Frame = +1
Query: 373 NRNVAVDTLRCSLGGLPSNVTETDLXVFFGRYGKV--MEVVIMYDQXKKKSXGFGFLSFE 546
N V T + +GGL +E D+ +E+ ++ D+ K G+ F++F
Sbjct: 96 NELAHVRTKKLFIGGLKDEHSEEDVKTALAPLSPFAPLEIKMVRDRETNKFKGYCFVNFP 155
Query: 547 DEIXVERVTPRTLSXTSKGXXG*DKAAXEPPDGSGXTPGXXGXRPGRXAPXXXAXGXGXA 726
+E V+++ KG K A + G+G G G GR AP G
Sbjct: 156 NEHIVDKLY-LVRHIQVKGKDVEMKKAADL--GAGGRGGRGGRGGGRGAPRGRGGPRGGG 212
Query: 727 GGPG 738
GG G
Sbjct: 213 GGSG 216
Score = 33.5 bits (73), Expect = 0.24
Identities = 18/75 (24%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +3
Query: 129 KLFVGGLSWETSQENLQRYFSRYGEV--IDCVVMKNSESGRSRGFGFVTFADPSLVNLVL 302
KLF+GGL E S+E+++ + ++ ++++ E+ + +G+ FV F + +V+ +
Sbjct: 105 KLFIGGLKDEHSEEDVKTALAPLSPFAPLEIKMVRDRETNKFKGYCFVNFPNEHIVDKLY 164
Query: 303 QNGPHQLDGRTIDPK 347
Q+ G+ ++ K
Sbjct: 165 LVRHIQVKGKDVEMK 179
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 52.0 bits (119), Expect = 7e-07
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +3
Query: 123 KGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFAD-PSLVNLV 299
K ++VG L + + +L + F RYG+V+ ++++ E+ SRG F+ F D S N V
Sbjct: 9 KSTVYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAV 68
Query: 300 LQNGPHQLDGRTI 338
Q+ GRTI
Sbjct: 69 AAVNKKQMFGRTI 81
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 50.4 bits (115), Expect = 2e-06
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Frame = +3
Query: 120 EKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLV 299
E+ + ++G LS+ ++ L+ F +V+D V+ + E+GR RGFGFVTF
Sbjct: 3 EEYRCYIGNLSYSVDEQALEEKFHGC-DVVDVKVITDRETGRPRGFGFVTFGSKE----E 57
Query: 300 LQNGPHQLDGRTIDPKPCNPRTLQ-KPKRGGGYPKVFLGRAAIERYRNRSQXIFRTLWEG 476
++ + DG+ D +P Q + +RG G + R+ Y S+ + G
Sbjct: 58 MEKAIDEFDGQDFDGRPMKVNQAQPRGERGAGGSRAGGYRSGGGGYGGSSRGGY---GGG 114
Query: 477 HGGGHY 494
GGG Y
Sbjct: 115 RGGGGY 120
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 48.8 bits (111), Expect = 6e-06
Identities = 19/57 (33%), Positives = 36/57 (63%)
Frame = +3
Query: 114 DDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPS 284
D ++F G L E + E+L R F++Y + ++++ +S +S+G+GFV+F DP+
Sbjct: 213 DPNDFRIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPN 269
Score = 39.9 bits (89), Expect = 0.003
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +1
Query: 400 RCSLGGLPSNVTETDLXVFFGRYGKVMEVVIMYDQXKKKSXGFGFLSFED 549
R G L S VT+ L F +Y ++ I+ D+ KS G+GF+SF+D
Sbjct: 218 RIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKD 267
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 48.0 bits (109), Expect = 1e-05
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 132 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN- 308
+FVG + +E S+E L+ FS G VI ++ + E+G+ +G+GF + D ++N
Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNL 86
Query: 309 GPHQLDGRTI 338
++L+GR +
Sbjct: 87 NGYELNGRAL 96
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +3
Query: 99 NPDMD--DDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 272
+P MD + + +FVG L T + + YFS GE ++ V + SG+S+GF FV
Sbjct: 31 SPSMDLLEQSRRTIFVGSLHPSTVESTIFEYFSTLGEQVEHVKCIRTLSGKSKGFAFVRL 90
Query: 273 ADPSLVNLVLQNGPHQLDGRTI 338
V VL H +D +
Sbjct: 91 RKKEAVESVLGRDDHVIDNSDV 112
Score = 29.1 bits (62), Expect = 5.3
Identities = 16/74 (21%), Positives = 32/74 (43%)
Frame = +3
Query: 117 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNL 296
D K+ + + + + +FS GE+ + +N ++ +G VTFA +
Sbjct: 118 DTYRKVILKNIPSSIGESQILEHFSSSGEIASVYIPENLKTKERKGHCIVTFASVTEAFE 177
Query: 297 VLQNGPHQLDGRTI 338
V++ H + G I
Sbjct: 178 VVKKRKHHIHGYDI 191
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 46.4 bits (105), Expect = 3e-05
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Frame = +3
Query: 111 DDDEKG-KLFVGGLSWETSQENLQRYFSRYG-EVIDCVVMKNSESGRSRGFGFVTFADPS 284
D + +G KL++G L++ + + +++ F +G E +D ++++ ESGRSRGFGFV
Sbjct: 3 DGENRGRKLYIGNLNFNSDEGEIEQAFEEFGVEKVD--ILRDKESGRSRGFGFVLLQSAD 60
Query: 285 LVNLVLQN-GPHQLDGRTIDPKPCNPRTLQKPKRGGG 392
+ ++ + GR I +T RGGG
Sbjct: 61 QIAPAIEKMNQSSVGGRNITVALALDKT---ENRGGG 94
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 46.4 bits (105), Expect = 3e-05
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +3
Query: 120 EKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF-ADPSLVNL 296
+K LFV L ++ + ++ FS++G V+ V + + +G+ +G+G+V + + S
Sbjct: 169 DKHTLFVSNLPFDAKESEIEELFSKHG-VVKQVRLVTNRAGKPKGYGYVEYEQESSASTA 227
Query: 297 VLQNGPHQLDGRTIDPKPCNPRTLQKPKR 383
VL ++ GRTI NP T + P R
Sbjct: 228 VLTLDKTEVKGRTISVALSNPPTRRGPPR 256
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +3
Query: 105 DMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPS 284
D D + +F+G L ++ +E L+ F+ G V ++++ ++G +GFG+V F
Sbjct: 49 DKAHDHQRSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKD 108
Query: 285 LVNLVLQNGPHQLDGRTID--PKPCNPRT 365
V L+ + GR I P P+T
Sbjct: 109 AVVFALKMNNAEFKGRKIRVFPSKDKPQT 137
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +3
Query: 117 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCV-VMKNSESGRSRGFGFVTFA--DPSL 287
D LF+G L E ++ L FS +G ++ +M++S++G S+GF F+ FA D S
Sbjct: 97 DVGANLFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASD 156
Query: 288 VNLVLQNGPH 317
+ NG +
Sbjct: 157 AAIEAMNGQY 166
Score = 32.7 bits (71), Expect = 0.43
Identities = 16/61 (26%), Positives = 32/61 (52%)
Frame = +3
Query: 90 MRMNPDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVT 269
M P + ++ ++VGGL + S+ + F + G V++ + K+ + +G+GFV
Sbjct: 1 MAAGPIAERNQDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVE 60
Query: 270 F 272
F
Sbjct: 61 F 61
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 409 LGGLPSNVTETDLXVFFGRYGKVMEVVIMYDQXKKKSXGFGFLSFEDE 552
+GGL V+E + F + G V+ V + D+ + G+GF+ F E
Sbjct: 17 VGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGE 64
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 42.7 bits (96), Expect = 4e-04
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Frame = +3
Query: 120 EKGKLFVGGLSWETSQENLQRYFSRYG-EVIDCVVMKN-------SESGRSRGFGFVTFA 275
+ K++ G L ++ +Q+ L+ F V D +++K + RSRGFGFVTFA
Sbjct: 48 DPNKVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFA 107
Query: 276 DPSLVNLVLQN-GPHQLDGRTIDPKPCNPRTLQKPKRGGGY 395
+P +++ ++ GRT+ P R + GGGY
Sbjct: 108 NPEDAQTAVKSLNGKEVQGRTLKIAPSISR--GRDGGGGGY 146
Score = 28.3 bits (60), Expect = 9.2
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Frame = +1
Query: 358 LALFKNRNVAVDTLRCSLGGLPSNVTETDLX-VFFGRYGKVMEVVIM-------YDQXKK 513
L + + V D + G LP +T+ +L VF V +V+I+ Y Q +
Sbjct: 37 LKMCDQKMVFADPNKVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEP 96
Query: 514 KSXGFGFLSF 543
+S GFGF++F
Sbjct: 97 RSRGFGFVTF 106
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/66 (28%), Positives = 38/66 (57%)
Frame = +3
Query: 111 DDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLV 290
D D ++FV G + ET++ L+ +F YG V + ++++ + G S+G+ F+TF +
Sbjct: 3 DQDISKRIFVKGFNRETTESELRAFFEEYGVVKESKIVRD-KHGVSKGYAFITFESQEVA 61
Query: 291 NLVLQN 308
+ + N
Sbjct: 62 DGLRDN 67
Score = 33.5 bits (73), Expect = 0.24
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 400 RCSLGGLPSNVTETDLXVFFGRYGKVMEVVIMYDQXKKKSXGFGFLSFEDE 552
R + G TE++L FF YG V E I+ D+ S G+ F++FE +
Sbjct: 9 RIFVKGFNRETTESELRAFFEEYGVVKESKIVRDK-HGVSKGYAFITFESQ 58
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 42.3 bits (95), Expect = 5e-04
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +3
Query: 132 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG 311
L++ L E L+ FS YG + VMK+ + G S+GFGFV F+ P +
Sbjct: 214 LYIKNLDDPIDDERLREEFSPYGTISSAKVMKD-DKGNSKGFGFVCFSSPEEATKAVT-- 270
Query: 312 PHQLDGRTIDPKP 350
+++GR + KP
Sbjct: 271 --EMNGRILISKP 281
Score = 33.5 bits (73), Expect = 0.24
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 132 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 281
++V + E ++ + G+++ VM + E G+S+GFGFV+F P
Sbjct: 111 VYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPE-GKSKGFGFVSFETP 159
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 469 GKVMEVVIMYDQXKKKSXGFGFLSFE 546
GK++ + +M D + KS GFGF+SFE
Sbjct: 133 GKIVSLKVMTDP-EGKSKGFGFVSFE 157
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 41.9 bits (94), Expect = 7e-04
Identities = 19/83 (22%), Positives = 46/83 (55%)
Frame = +3
Query: 111 DDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLV 290
++ ++ +++ + + +L+ F YG + D +++ +++G+S+GFG+VT+ +
Sbjct: 58 EEHDQRTIYIRDFRPDIRKSSLESVFGPYGAIEDLSIIR-TQTGKSKGFGYVTYENAESA 116
Query: 291 NLVLQNGPHQLDGRTIDPKPCNP 359
L G H +DG+ + +P P
Sbjct: 117 QRALA-GTHIIDGKWVIAEPKMP 138
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 41.9 bits (94), Expect = 7e-04
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = +3
Query: 117 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNL 296
DE+ L + + SQE++++ F G V C ++++ +G+S G+ FV + +P N
Sbjct: 24 DERTNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANK 83
Query: 297 VLQ--NGPHQLDGRTIDPKPCNPRTLQ 371
++ NG +L +T+ P + +
Sbjct: 84 AVREMNGA-RLQNKTLKVSFARPSSTE 109
Score = 28.7 bits (61), Expect = 7.0
Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +1
Query: 409 LGGLPSNVTETDLXVFFGRYGKVMEVVIMYDQXKKKSXGFGFLSF----EDEIXVERVTP 576
+ GLP ++ E ++ F +GK++ ++ D + G GF+ F E + ++ +
Sbjct: 117 ISGLPKDMKEEEVEALFKPFGKIITSKVLKD-VSGEGRGTGFVRFDKRCEAQTAIDDLNN 175
Query: 577 RTLSXTS 597
+TL T+
Sbjct: 176 KTLPGTN 182
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = +3
Query: 117 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNL 296
D K+F+GGL +++ ++ S +GE+ ++K+S +G S+G+ F + D + ++
Sbjct: 670 DSPHKIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEYVDLGITDV 729
Query: 297 VLQ 305
+Q
Sbjct: 730 AIQ 732
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 129 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVL-Q 305
+L+VG L + ++ ++ F +G V ++ +SE+ RS+G+GFV F + + Q
Sbjct: 243 RLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQ 302
Query: 306 NGPHQLDGRTIDPKPCNPR 362
+L GR + P R
Sbjct: 303 MNGFELAGRPLKIGPVTER 321
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/76 (26%), Positives = 39/76 (51%)
Frame = +3
Query: 111 DDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLV 290
++ ++ +F L+ +L+ +FS+ G+V D ++ + S RS+G ++ F D S V
Sbjct: 141 EEKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDKSAV 200
Query: 291 NLVLQNGPHQLDGRTI 338
L + +L G I
Sbjct: 201 PLAIGLSGQKLLGAPI 216
Score = 39.1 bits (87), Expect = 0.005
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 400 RCSLGGLPSNVTETDLXVFFGRYGKVMEVVIMYDQXKKKSXGFGFLSFEDEIXVER 567
R +G L N+TE + F +G V V ++YD +S G+GF+ F + +R
Sbjct: 243 RLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKR 298
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 40.7 bits (91), Expect = 0.002
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 135 FVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN-G 311
+VGGL+ E ++ L F +G++ D + + + + RGFGFV F + N
Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMN 67
Query: 312 PHQLDGRTIDPKPCNPRTLQK 374
+L GRTI P +++
Sbjct: 68 ESELFGRTIRVNLAKPMKIKE 88
Score = 35.5 bits (78), Expect = 0.061
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +1
Query: 409 LGGLPSNVTETDLXVFFGRYGKVMEVVIMYDQXKKKSXGFGFLSFE 546
+GGL V E L F +G + +V I D K GFGF+ FE
Sbjct: 9 VGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFE 54
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 40.7 bits (91), Expect = 0.002
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +3
Query: 102 PDMD-DDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 272
PD D LFV L+ T+ E+L+ FSR+G ++ C V+++ ++G S + F+ F
Sbjct: 111 PDADIKPPDNVLFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEF 168
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/47 (40%), Positives = 33/47 (70%)
Frame = +3
Query: 132 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 272
+++GGLS + ++ L F+++G V D V++++ ESG+SR GFV F
Sbjct: 526 VWIGGLSEDVTENVLLELFNKFGPVKDVVILRD-ESGKSRQSGFVHF 571
Score = 36.3 bits (80), Expect = 0.035
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +1
Query: 409 LGGLPSNVTETDLXVFFGRYGKVMEVVIMYDQXKKKSXGFGFLSF 543
+GGL +VTE L F ++G V +VVI+ D+ KS GF+ F
Sbjct: 528 IGGLSEDVTENVLLELFNKFGPVKDVVILRDE-SGKSRQSGFVHF 571
>SB_37749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +3
Query: 93 RMNPDMDDDEKGK-LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVT 269
+ P D E GK L+V LS T +L+ FS+YG+V+ ++ NS++ ++ FG VT
Sbjct: 337 KATPTKDKKEGGKSLWVANLSSITRAADLKTRFSQYGKVVGAKIVTNSKAPGAQCFGLVT 396
Query: 270 FADPSLVNLVLQN-GPHQLDGRTI 338
+Q+ +L GR I
Sbjct: 397 MTTSEEAAKCIQHLHRTELHGRAI 420
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Frame = +3
Query: 129 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 308
KL+V L+ +++++Q FS YG V + + + SRGF +V + DP L++
Sbjct: 1158 KLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALKH 1217
Query: 309 -GPHQLDGRTIDPK---PCNPRTLQKPKRGGGYPK 401
Q+DG+ I + P PR ++ R P+
Sbjct: 1218 MDGGQIDGQEIAVQSVLPPRPRDVRPAYRRPSPPR 1252
Score = 29.5 bits (63), Expect = 4.0
Identities = 33/144 (22%), Positives = 50/144 (34%), Gaps = 4/144 (2%)
Frame = +1
Query: 337 STLSRAILALFKNRNVAVDTLRCSLGGLPSNVTETDLXVFFGRYGKVMEVVIMYDQXKKK 516
S+ SR+ + R+ + + L NV + + F YG+V V + D+
Sbjct: 1137 SSRSRSRSPRRRKRSPTPKPTKLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNL 1196
Query: 517 SXGFGFLSFEDEIXVERVTPRTLSXTSKGXXG*DKAAXE---PPDGSGXTPGXXGXRPGR 687
S GF ++ + D E + L G + A + PP P P R
Sbjct: 1197 SRGFAYVEYVDPEECE----KALKHMDGGQIDGQEIAVQSVLPPRPRDVRPAYRRPSPPR 1252
Query: 688 XAPXXXAXG-XGXAGGPGXAPXRR 756
P GG G P RR
Sbjct: 1253 RRPQQWRRSPPRFRGGGGFRPMRR 1276
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 39.9 bits (89), Expect = 0.003
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 117 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 272
D L V L++ T+ E+L++ F +YG++ D + ++ + SRGF FV F
Sbjct: 13 DGMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRF 64
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 418 LPSNVTETDLXVFFGRYGKVMEVVIMYDQXKKKSXGFGFLSFEDEIXVE 564
L T DL F +YG + ++ I D+ +S GF F+ F ++ E
Sbjct: 23 LTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAE 71
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 39.9 bits (89), Expect = 0.003
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +3
Query: 102 PDMDDDEKGK--LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFA 275
PD +++ K L++ GL T+ ++L R +YG +I + + ++ +G+GFV F
Sbjct: 90 PDTGEEKLSKTNLYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFE 149
Query: 276 DP 281
P
Sbjct: 150 SP 151
Score = 35.9 bits (79), Expect = 0.046
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 415 GLPSNVTETDLXVFFGRYGKVMEVVIMYDQXKKKSXGFGFLSFEDEIXVER 567
GL +N T+ DL +YG ++ + D+ G+GF+ FE I ++
Sbjct: 106 GLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFESPISAQK 156
Score = 32.7 bits (71), Expect = 0.43
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +1
Query: 391 DTLRCSLGGLPSNVTETDLXVFFGRYGKVMEVVIMYDQXKKKSXGFGFLSFEDEIXVERV 570
D + LP N E L F +YGKV+ I+ D+ S G GF E E+V
Sbjct: 177 DPTNLYIQNLPQNCDEAMLENMFSKYGKVISTRILRDK-DTNSKGVGFARMESAEKCEQV 235
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = +3
Query: 114 DDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGF 263
+ + L++ L + L+ FS+YG+VI ++++ ++ S+G GF
Sbjct: 175 EQDPTNLYIQNLPQNCDEAMLENMFSKYGKVISTRILRDKDT-NSKGVGF 223
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 38.7 bits (86), Expect = 0.007
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +3
Query: 129 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVT 269
+ ++G LS+ ++ L+ F V+D V+ + E+GR RGFGFVT
Sbjct: 83 RCYIGNLSYSVDEQALEEKFHDCN-VVDVRVITDRETGRPRGFGFVT 128
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 38.3 bits (85), Expect = 0.009
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 90 MRMNPDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVT 269
M N + + +++VG L + +++L F +YG + D V +KN G F FV
Sbjct: 249 MSSNMNRSNSNDCRVYVGNLPQDVREKDLHDIFYKYGHIAD-VDLKN-RRGAGPPFAFVE 306
Query: 270 FADP-SLVNLVLQNGPHQLDGRTI 338
F DP + V H+ DG I
Sbjct: 307 FEDPRDAEDAVKGRDGHEFDGYRI 330
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 37.9 bits (84), Expect = 0.011
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +3
Query: 105 DMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPS 284
D+D+ ++F+ S + E+++ F +YG + D V+K+ + +RG +V F S
Sbjct: 17 DVDNPPFSRVFIV-CSKRHNAEDIRSAFEQYGTIEDVWVVKDKATKENRGVCYVKFVKAS 75
Query: 285 LVNLVLQNGPHQLDGRTI--DPKP 350
L + ++DGR I DPKP
Sbjct: 76 SAALACE----EMDGRNIGDDPKP 95
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 37.5 bits (83), Expect = 0.015
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +3
Query: 102 PDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFAD 278
P+ D LFVG L S ++L+ F ++G V+D V +K G+ + FV FAD
Sbjct: 229 PEEDPKATRTLFVGNLETGISCQDLRLSFEKFGVVLD-VDIKRPARGQGNTYAFVKFAD 286
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 37.5 bits (83), Expect = 0.015
Identities = 17/70 (24%), Positives = 36/70 (51%)
Frame = +3
Query: 132 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG 311
+F+ LS++++Q+N+ F ++G++ C V+ + + S+G FV + V L
Sbjct: 418 VFIRNLSFDSTQKNITNLFKQFGDIAYCKVVVDHLTQHSKGSAFVKYRSAESVTQCLAAT 477
Query: 312 PHQLDGRTID 341
+G +D
Sbjct: 478 DEDSEGLFLD 487
Score = 34.7 bits (76), Expect = 0.11
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +3
Query: 120 EKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSR--GFGFVTFAD 278
+K +L + L++ ++ L+ FS +GEV + V + R+R GFGFV F +
Sbjct: 245 KKSRLIIRNLAFNCTEAILKETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQFTN 299
Score = 31.5 bits (68), Expect = 0.99
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +3
Query: 123 KGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSES-GRSRGFGFVTFADPSLVNLV 299
K +FV L + + + F G + ++K+ ++ R RGFG+VTFA L
Sbjct: 19 KTTIFVRNLPYNITDAEFKSAFEEIGPLKRGFIVKDKDNQNRCRGFGYVTFALEEDA-LK 77
Query: 300 LQNGPHQLDGRTIDPKPCNPRTLQKPKRGG 389
++ + GR I + KP R G
Sbjct: 78 AKDNIKSIKGRPIHLDFSEKKARTKPGREG 107
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 36.7 bits (81), Expect = 0.026
Identities = 13/57 (22%), Positives = 31/57 (54%)
Frame = +3
Query: 102 PDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 272
P D+ + L+V + + + ++ F YG +++C ++++ +G +G GFV +
Sbjct: 125 PGGDNTKGANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLY 181
Score = 29.1 bits (62), Expect = 5.3
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = +3
Query: 132 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG 311
L+V + ++ +QE + F + G V +M + + + +GF FVT A QN
Sbjct: 277 LYVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQE----EAQNA 332
Query: 312 PHQLDGRTIDPKPCNP---RTLQKPKR 383
L+G KP RTL + R
Sbjct: 333 IQTLNGFMYTNKPLQSSRIRTLNRRSR 359
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 36.7 bits (81), Expect = 0.026
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +3
Query: 219 VMKNSESGRSRGFGFVTFADPSLVNLVLQNGPHQ-LDGRTIDPKPCNPR--TLQKPKRGG 389
++ + E+GR RGFGFVTF + + Q LDGR + PR + +GG
Sbjct: 127 IITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKVNEAKPRGDSGGGGSQGG 186
Query: 390 GY 395
GY
Sbjct: 187 GY 188
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 36.3 bits (80), Expect = 0.035
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 132 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFA 275
LFVG L +E ++ S YG + ++++ +G S+G+GFV +A
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYA 162
Score = 31.9 bits (69), Expect = 0.75
Identities = 16/68 (23%), Positives = 28/68 (41%)
Frame = +1
Query: 409 LGGLPSNVTETDLXVFFGRYGKVMEVVIMYDQXKKKSXGFGFLSFEDEIXVERVTPRTLS 588
+G LP TET YG + + ++ + S G+GF+ + + + L+
Sbjct: 117 VGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQLLN 176
Query: 589 XTSKGXXG 612
SK G
Sbjct: 177 TASKYIGG 184
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 174 LQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFA 275
++ FS+ G V V N +G SRGF FV +A
Sbjct: 222 IKELFSQTGNVTFAQVAINPANGGSRGFAFVDYA 255
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 35.9 bits (79), Expect = 0.046
Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 5/106 (4%)
Frame = +1
Query: 481 EVVIMYDQXKKKSXGFGFLSFEDEIXVERVTPRTLSXTSKGXXG*DKAA----XEPPDGS 648
EV+++YD+ ++S FG+++F DE + + KG +A + + S
Sbjct: 4 EVIVVYDRETRRSRNFGYVTFRDEQDAADAMKQMGGESGKGKEIFGRALNIEYAQEKESS 63
Query: 649 GXTPGXXGXRPGRXAP-XXXAXGXGXAGGPGXAPXRRXXXXPXSXG 783
G G P R P G G G G P R P G
Sbjct: 64 APRRGGYGGGPPRGPPRGHPMRGRGAPYGRGGPPSRGPPRGPPLPG 109
Score = 31.5 bits (68), Expect = 0.99
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +3
Query: 195 YGEVIDCVVMKNSESGRSRGFGFVTFAD-PSLVNLVLQNGPH-----QLDGRTIDPKPCN 356
Y EVI V+ + E+ RSR FG+VTF D + + Q G ++ GR ++ +
Sbjct: 2 YAEVI---VVYDRETRRSRNFGYVTFRDEQDAADAMKQMGGESGKGKEIFGRALNIEYAQ 58
Query: 357 PRTLQKPKRGG 389
+ P+RGG
Sbjct: 59 EKESSAPRRGG 69
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 35.5 bits (78), Expect = 0.061
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +1
Query: 391 DTLRCSLGGLPSNVTETDLXVFFGRYGKVMEVVIMYDQXKKKSXGFGFLSFEDEIXVERV 570
+T +G LP N+ E D+ F RYG+V V I+ K+S G SF D + +
Sbjct: 4 ETRHLWVGNLPENIREEDIVKHFTRYGRVESVKIL----PKRSAEGGRASFVDFVDIRSA 59
Query: 571 T 573
T
Sbjct: 60 T 60
Score = 35.5 bits (78), Expect = 0.061
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +3
Query: 132 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPS 284
LFVG + T+ +L+ F RYGEVID + K + G + + FV FA+ S
Sbjct: 251 LFVGNIEKTTTYGDLKEAFERYGEVIDVDIKK--QPG-NNPYAFVQFAELS 298
Score = 31.5 bits (68), Expect = 0.99
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +3
Query: 120 EKGKLFVGGLSWETSQENLQRYFSRYGEV--IDCVVMKNSESGRSRGFGFVTFAD 278
E L+VG L +E++ ++F+RYG V + + +++E GR+ FV F D
Sbjct: 4 ETRHLWVGNLPENIREEDIVKHFTRYGRVESVKILPKRSAEGGRA---SFVDFVD 55
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +3
Query: 132 LFVGGLSWETSQENLQRYFSRYGEVIDCVV 221
++VGG++ S++ ++R+F RYG V V+
Sbjct: 330 IWVGGVTNSLSEQQVERHFGRYGRVTKVVI 359
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +1
Query: 409 LGGLPSNVTETDLXVFFGRYGKVMEVVI 492
+GG+ ++++E + FGRYG+V +VVI
Sbjct: 332 VGGVTNSLSEQQVERHFGRYGRVTKVVI 359
>SB_24012| Best HMM Match : RRM_1 (HMM E-Value=0.69)
Length = 166
Score = 35.5 bits (78), Expect = 0.061
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 222 MKNSESGRSRGFGFVTFADPSLVNLVLQNGPHQLDGRTIDP 344
+K+ +SGRS+ +GFV F D + N PH ++G+ P
Sbjct: 94 VKDLKSGRSKKYGFVFFKDEEACEKAMGNQPHFIEGQKSGP 134
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 35.5 bits (78), Expect = 0.061
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = +3
Query: 216 VVMKNSESGRSRGFGFVTFAD-PSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGG 392
V+M+ + RSRGFGFVT + L ++ + + +GR + + + +RGGG
Sbjct: 72 VIMEREQPERSRGFGFVTLENQEDLEDVTRKFDGFEYEGRRLKVAEASKDSGGGGRRGGG 131
Query: 393 YPKVFLGRAAIERYRNRSQXIFRTLWEGHGGGH 491
Y GR YR+ + G GGG+
Sbjct: 132 YGG---GRGGGGGYRSGGGYRGGGGYRGGGGGY 161
Score = 34.7 bits (76), Expect = 0.11
Identities = 30/108 (27%), Positives = 43/108 (39%)
Frame = +1
Query: 415 GLPSNVTETDLXVFFGRYGKVMEVVIMYDQXKKKSXGFGFLSFEDEIXVERVTPRTLSXT 594
G SN DL + ++ VIM + ++S GFGF++ E++ +E VT +
Sbjct: 48 GKVSNTILLDLRLVKEVSLSILARVIMEREQPERSRGFGFVTLENQEDLEDVTRKFDGFE 107
Query: 595 SKGXXG*DKAAXEPPDGSGXTPGXXGXRPGRXAPXXXAXGXGXAGGPG 738
+G K A D G G GR G G GG G
Sbjct: 108 YEGRR--LKVAEASKDSGGGGRRGGGYGGGRGGGGGYRSGGGYRGGGG 153
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 35.1 bits (77), Expect = 0.080
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 195 YGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN-GPHQLDGRTIDPKPCNPRTLQ 371
YGE+++ ++++ ++G+ +GF F+ + D L + N +L GRTI C+ +
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNGIKLGGRTIRVDHCS--NYR 59
Query: 372 KPK 380
+PK
Sbjct: 60 RPK 62
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 466 YGKVMEVVIMYDQXKKKSXGFGFLSFEDE 552
YG+++ V ++ D+ K GF FL +ED+
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQ 30
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 34.3 bits (75), Expect = 0.14
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +3
Query: 216 VVMKNSESGRSRGFGFVTFADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGG 389
++M + + R RGFGFVTF + + H ++ + ++ K P+ + +GG
Sbjct: 1 MLMFDKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPKEVMYSLQGG 58
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 34.3 bits (75), Expect = 0.14
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +3
Query: 129 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 308
++F+G + + ++ L F G + D +M + SG ++GF F TF++ QN
Sbjct: 153 QVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKD----EAQN 208
Query: 309 GPHQLDGRTIDP 344
+LD + I P
Sbjct: 209 AVKKLDNKEIRP 220
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 129 KLFVGGLSWETSQENLQRYFSRYGEVIDCVV--MKNSESGRSRGFGFVTFADPSLVNL 296
+LFVG + S++ + FS+ +D V+ + + G++RGF F+ + +L
Sbjct: 234 RLFVGSIPKTKSKQEILEEFSKVTNGLDDVIVYLSADQKGKNRGFAFLEYESHQAASL 291
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 33.1 bits (72), Expect = 0.32
Identities = 14/62 (22%), Positives = 33/62 (53%)
Frame = +3
Query: 162 SQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNGPHQLDGRTID 341
+ E+L+ F +G++ ++++ ++ ++G+G+V F S + L+N L +
Sbjct: 65 NDEDLRSKFESFGDIEYVQIVRDHKTRENKGYGYVKFHKSSTAAMALENCDKSLKAVWAE 124
Query: 342 PK 347
PK
Sbjct: 125 PK 126
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 129 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 272
+LFV +S +QE + R F + C + +N +G S+GF +VT+
Sbjct: 204 RLFVI-ISTAVTQEQVVRLFDIIPGMQVCDLKRNYNTGESKGFAYVTY 250
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 32.7 bits (71), Expect = 0.43
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 120 EKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 272
E + V LS ET + +LQ F G + + K+ + +S+GF F+ F
Sbjct: 179 ETATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINF 229
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +1
Query: 391 DTLRCSLGGLPSNVTETDLXVFFGRYGKVMEVVIMYDQXKKKSXGFGFLSF 543
+T + L E+DL F G + + + D+ +S GF F++F
Sbjct: 179 ETATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINF 229
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 31.9 bits (69), Expect = 0.75
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 319 NLMAG-PSTLSRAILALFKNRNVAVDTLRCSLGGLPSNVTETDLXVFFGRYGKVMEVVIM 495
N+ G PS + +A + + A R + + ++ E D+ F +GKV+ +
Sbjct: 172 NIKVGRPSNVPQAAPLIEQFEQEAKKYARIYIASVHPDLLEDDIKSVFEAFGKVVHCSLS 231
Query: 496 YDQXKKKSXGFGFLSFEDE 552
+ K G+GF+ +E++
Sbjct: 232 KEPMTGKHKGYGFIEYENQ 250
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 31.5 bits (68), Expect = 0.99
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 385 AVDTLRCSLGGLPSNVTETDLXVFFGRYGKVMEV 486
A D+ + +G LPS V + D+ F +YG ++E+
Sbjct: 353 APDSHQVFIGNLPSGVKDADVNEVFSKYGTILEI 386
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 31.5 bits (68), Expect = 0.99
Identities = 24/89 (26%), Positives = 37/89 (41%)
Frame = +3
Query: 120 EKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLV 299
E K+++G L S+ ++ F YG + D V +N GF F F D
Sbjct: 30 EMTKVYIGSLGDNASKREIENEFGYYGPLKDVWVARNPP-----GFAFCIFDD----RRD 80
Query: 300 LQNGPHQLDGRTIDPKPCNPRTLQKPKRG 386
++ +LDGR I + + P RG
Sbjct: 81 AEDAVRELDGRYICGQRVRVELAKGPSRG 109
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 31.5 bits (68), Expect = 0.99
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 129 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 281
+LFVG LS ET +L+ F YG+++ C + +GF+ + DP
Sbjct: 7 QLFVGRLSKETKLRDLENVFYLYGKLLRCDL--------KTAYGFIEYEDP 49
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +1
Query: 319 NLMAGPSTLSRAILALFKNRNVAVDTLRCSLGGLPSNVTETDLXVFFGRYGKVMEVVIMY 498
N+ A P L + V + + +G + V +L FFG +G V+ I+
Sbjct: 53 NVAALPIDLVGEVSKDISKYKVVSNKCKVFVGNIGFKVRARELKDFFGYFGDVVYAQIIM 112
Query: 499 DQXKKKSXG 525
D+ KK+S G
Sbjct: 113 DRVKKRSKG 121
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 123 KGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRG 254
K K+FVG + ++ L+ +F +G+V+ ++ + RS+G
Sbjct: 78 KCKVFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKG 121
>SB_3721| Best HMM Match : RRM_1 (HMM E-Value=3.1)
Length = 51
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 237 SGRSRGFGFVTFADPSLVNLVLQNGPHQLDGRTIDPKPC 353
+GRS+G+ +V F + S V L +++GR + PC
Sbjct: 2 AGRSKGYAYVEFNNESTVQAALAMDREKMEGRPMFISPC 40
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +3
Query: 114 DDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSR 251
D KLFVG + +++L+ F YG++ + ++K+ +G+ +
Sbjct: 166 DSNSVKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHK 211
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +3
Query: 102 PDMDDDEK--GKLFVGGLSWETSQENLQRYFSRYGEV 206
P +D E+ +FVG L ++ L++YFS+YGEV
Sbjct: 11 PTPEDPERLDRTVFVGNLPLTLKKKALKKYFSKYGEV 47
>SB_41149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 30.7 bits (66), Expect = 1.7
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = +3
Query: 129 KLFVGGLSWETSQENLQRYF----SRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNL 296
+ +VG LS + ++E+L +F + Y V + +SG+S GFGFV +L
Sbjct: 6 RFYVGNLSVKATREDLSHHFGLDATPYLRSSCWVELAVEKSGKSLGFGFVNVPKHLADHL 65
Query: 297 VLQNGPHQLDGR-TIDP 344
+ N D R TI+P
Sbjct: 66 MHLNQTKLFDKRITIEP 82
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 742 PPPAPXXXRPPXPRXXGPPXQXXGXP 665
PPP P PP P PP Q G P
Sbjct: 697 PPPPPQPSTPPPPPPSTPPVQQSGAP 722
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/50 (30%), Positives = 32/50 (64%)
Frame = +3
Query: 129 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFAD 278
++++G L + T++++++R+F YG + D + +KN+ +GFV F D
Sbjct: 4 RVYLGRLPYGTTEDDVRRFFRSYGRLRD-INLKNN-------YGFVEFED 45
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 30.3 bits (65), Expect = 2.3
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = +3
Query: 195 YGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 308
YGE+++ ++++ ++G+ +GF F+ + D L + N
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDN 39
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 466 YGKVMEVVIMYDQXKKKSXGFGFLSFEDE 552
YG+++ V ++ D+ K GF FL +ED+
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQ 30
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 415 GLPSNVTETDLXVFFGRYGKVMEVVIMYD-QXKKKSXG 525
GL TE DL F +YG V + I+YD Q K+++ G
Sbjct: 187 GLSLYTTERDLRPVFEKYGPVEAIQIVYDHQAKERTTG 224
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 87 GMRMNPDMDDDEKG-KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGF 263
G R P +E G ++F+G + + ++ L + GE+ + + + +G ++GF F
Sbjct: 139 GERGFPTTWTEESGTEVFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAF 198
Query: 264 VTFAD 278
TF +
Sbjct: 199 CTFTE 203
>SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 29.9 bits (64), Expect = 3.0
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 16/110 (14%)
Frame = +3
Query: 93 RMNPDMDDDEKGK------------LFVGGLSWETSQEN-LQRYFSRYGEVIDCVVMKNS 233
R++PD DD E + + + GL E S+++ LQ ++ D +++N
Sbjct: 308 RLSPDRDDREHRRQGPRDPGPPTSVIMLHGLRDEISEDDVLQELYAAEVAFRDVRIVRN- 366
Query: 234 ESGRSRGFGFVTFADPSLVNL---VLQNGPHQLDGRTIDPKPCNPRTLQK 374
+ G +RGFGFV F P L+ GP ++ G I + P+ Q+
Sbjct: 367 KIGYTRGFGFVEFDTPEAAKEWMDYLKGGPLKVLGYNIGVEYSRPKEGQE 416
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +3
Query: 132 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 272
LFV + E ++++ FS YGE+ + V + +G +G+ V +
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEY 341
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +1
Query: 418 LPSNVTETDLXVFFGRYGKVMEVVIMYDQXKKKSXGFGFLSFEDEIXVE 564
LP +V E+D+ F YGK+ ++ + G+GF+ F+D E
Sbjct: 696 LPRDVRESDVEKFLRGYGKIRDISL--------KRGYGFVEFDDHRDAE 736
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 742 PPPAPXXXRPPXPRXXGPP 686
PPP+P RPP P PP
Sbjct: 220 PPPSPSPPRPPPPPPPSPP 238
>SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 28.3 bits (60), Expect = 9.2
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +1
Query: 409 LGGLPSNVTETDLXVFFGRYGKVMEVVIMYDQXKKKS----XGFGFLSFEDEIXVERV 570
+GGLP ++ E ++ F R+G + V + + KS G+ FL + +EI V+++
Sbjct: 348 VGGLPPDIDEDEIHASFCRFGSL--TVDWPHKAESKSYFPPKGYAFLLYLEEISVQKL 403
>SB_14471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 119 IIVHVWIHTHTLLLIKNKGWHXVKTPKP 36
I+ VW+ + T+ I GW V+ P+P
Sbjct: 143 IVAFVWVFSTTVGFIPYMGWRKVRRPEP 170
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,264,493
Number of Sequences: 59808
Number of extensions: 499125
Number of successful extensions: 1614
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1521
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2657535823
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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