Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_F24
         (918 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    26   1.8  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   4.2  
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    24   7.4  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            24   7.4  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 452 YFSDAMGRSWRW 487
           Y  DAMG SW+W
Sbjct: 346 YIEDAMGSSWQW 357


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = -3

Query: 742 PPPAPXXXRPPXPRXXGPPXQXXGXP 665
           PPPAP    PP P    PP    G P
Sbjct: 581 PPPAP----PPPPPMGPPPSPLAGGP 602


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = +2

Query: 131 TICWRTIMGNIPR-ELATL 184
           T+CW T+  ++PR E ATL
Sbjct: 92  TVCWDTVELDVPRAERATL 110


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = +2

Query: 131 TICWRTIMGNIPR-ELATL 184
           T+CW T+  ++PR E ATL
Sbjct: 92  TVCWDTVELDVPRAERATL 110


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,573
Number of Sequences: 2352
Number of extensions: 15687
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99641691
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)