Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_F23
(936 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 57 2e-10
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 55 7e-10
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 54 1e-09
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 52 5e-09
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 52 5e-09
AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 47 2e-07
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 26 0.37
AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombi... 24 2.0
AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory recept... 23 3.4
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 22 7.9
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 56.8 bits (131), Expect = 2e-10
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 402
++ E + A L + W D L WN E+G L ++ +LW+PDV++ N+A
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFD 101
Query: 403 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHN 555
G + V +NGS ++ + M + +P D Q C KFGS ++
Sbjct: 102 GTFQTNVVVKHNGSCLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGSWTYD 152
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 55.2 bits (127), Expect = 7e-10
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L + W D L WN E+ G ++ +LW+PDV++ N+A
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFD 101
Query: 403 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHN 555
G + V +NGS ++ + + + +P D Q C KFGS ++
Sbjct: 102 GTFQTNVVVKHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYD 152
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 54.4 bits (125), Expect = 1e-09
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L + W D L WN E+ G ++ +LW+PDV++ N+A
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFD 101
Query: 403 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHN 555
G + V + GS ++ + M + +P D Q C KFGS ++
Sbjct: 102 GTFQTNVVVKHGGSCLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGSWTYD 152
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 52.4 bits (120), Expect = 5e-09
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +1
Query: 271 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 444
L + W D L WN E+G L ++ +LW+PDV++ N+A G + V + GS
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGS 115
Query: 445 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHN 555
++ + M + +P D Q C KFGS ++
Sbjct: 116 CLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGSWTYD 152
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 52.4 bits (120), Expect = 5e-09
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +1
Query: 271 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 444
L + W D L WN E+G L ++ +LW+PDV++ N+A G + V + GS
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGS 115
Query: 445 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHN 555
++ + M + +P D Q C KFGS ++
Sbjct: 116 CLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGSWTYD 152
>AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor
subunit protein.
Length = 243
Score = 47.2 bits (107), Expect = 2e-07
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 16/164 (9%)
Frame = +1
Query: 127 SLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNWIDK 294
++S ++DS +YD+ P+ + V +T++ L +++ E + + + W D
Sbjct: 40 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 99
Query: 295 RLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSV 447
RL++ G T V SE +W PD +N ATT+ ++ RV ++GS+
Sbjct: 100 RLAYGKRP-GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RVHHSGSI 155
Query: 448 SWIKRLDISTPISMQLDNWPNDMQTCTFK---FGSXMHNT*PKW 570
+ RL I+ M L P D Q C + FG M + KW
Sbjct: 156 TRSIRLTITASCPMNLQYLPMDRQLCHIEIESFGYTMRDIRYKW 199
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 26.2 bits (55), Expect = 0.37
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 412 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPND 513
A+ + N + SW + ++ + + M LDNW ND
Sbjct: 272 AIEGIIFFNLAKSWPQLIEKWSRVEMALDNWKND 305
>AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine
recombinase protein.
Length = 340
Score = 23.8 bits (49), Expect = 2.0
Identities = 11/49 (22%), Positives = 24/49 (48%)
Frame = -2
Query: 233 MLACLKCRVRLTTILESGGESRSYVARSESIMRDSDVAFSHSAALAIAQ 87
+++ L C + T +L S GE+R ++ + S + S + +A+
Sbjct: 228 VVSTLSCYLERTELLRSSGETRLFLTHRKPFHPASTQSLSRWIKMVLAE 276
>AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory receptor
candidate 27 protein.
Length = 346
Score = 23.0 bits (47), Expect = 3.4
Identities = 12/56 (21%), Positives = 23/56 (41%)
Frame = +1
Query: 34 SCHKMSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVV 201
+C ++ T + F TC I +CE + +D ++ R+ KI +
Sbjct: 174 ACISIAYTNVSTDAFFYTCLIQIETQCEIVSDTLRNLDKIVTNGFRNVAESRKIFI 229
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 21.8 bits (44), Expect = 7.9
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -1
Query: 459 LYPG-DGAVIRYTGAESVVPGGGC 391
LY G DG+VI E VV G GC
Sbjct: 348 LYLGSDGSVILKNYKEMVVVGCGC 371
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,791
Number of Sequences: 336
Number of extensions: 3531
Number of successful extensions: 22
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26271982
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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