Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_F22
(849 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 189 5e-48
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 177 1e-44
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 177 1e-44
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 169 3e-42
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 168 1e-41
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 167 2e-41
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 166 4e-41
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 166 4e-41
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 165 5e-41
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 165 5e-41
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 165 5e-41
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 165 5e-41
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 165 5e-41
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 163 4e-40
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 160 2e-39
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 158 1e-38
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 158 1e-38
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 158 1e-38
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 158 1e-38
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 158 1e-38
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 131 1e-30
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 131 1e-30
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 102 7e-22
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 96 6e-20
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 58 2e-08
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 48 1e-05
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 40 0.004
BT022902-1|AAY55318.1| 571|Drosophila melanogaster IP12601p pro... 30 3.5
BT022891-1|AAY55307.1| 579|Drosophila melanogaster IP12501p pro... 30 3.5
AE014134-304|AAF51336.2| 482|Drosophila melanogaster CG31664-PA... 30 3.5
DQ168463-1|AAZ81897.1| 1522|Drosophila melanogaster BBG-LP12 pro... 29 8.1
DQ168462-1|AAZ81896.1| 1842|Drosophila melanogaster PDZ domain-c... 29 8.1
AE014296-2385|AAF49738.1| 1552|Drosophila melanogaster CG9587-PA... 29 8.1
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 189 bits (460), Expect = 5e-48
Identities = 100/237 (42%), Positives = 143/237 (60%), Gaps = 8/237 (3%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK A ++ IHKPGKP SYRP+SLLS++ K++ERL+ RL + +T +IL D QFGF
Sbjct: 493 WKMAAILMIHKPGKPEESPESYRPISLLSSLSKLWERLIANRLNDIMTERRILPDHQFGF 552
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R HS V+QVHRLT+HIL + ++ A+F D+ +AFD+V H+GLI K+ + P
Sbjct: 553 RQGHSTVEQVHRLTKHILQAFDDKEY--CNAVFIDMQQAFDRVWHDGLISKVKKL-FPAP 609
Query: 369 LVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPRSPETH--- 539
+++ +L +R F RV + S PR + AGVPQGS L PLL+S++ D+P H
Sbjct: 610 YYGVLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLGPLLYSVFTADLPCPNAYHMAD 669
Query: 540 -----LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAXVLF 695
LA +ADD A+ YS + R LQ + TL W ++W + +NP K+ F
Sbjct: 670 PRKALLATYADDIALLYSSNCCNEAARGLQEYLTTLAAWCKRWILKVNPQKTINPCF 726
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 177 bits (432), Expect = 1e-44
Identities = 89/235 (37%), Positives = 144/235 (61%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK A ++ I KPGKP + SYRP+SLLS + KI E+L++ RL F+ + L Q+GF
Sbjct: 517 WKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGF 576
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R+ + + +L +I + ++ + G + DI AFD V H+GL++KL +G P
Sbjct: 577 RNGLNTILPTLKLRNYIKESIQSKQSV--GLVTLDIEAAFDTVWHDGLLHKLKMIGTPIY 634
Query: 369 LVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPRSPETHLAL 548
L+ I+++FL++R F + ++S R L AGVPQGS L P LF+++ +DIP++ L+L
Sbjct: 635 LIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSL 694
Query: 549 FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAXVLFKRGRPP 713
FADD A+Y + S +++ +Q + L +++KW+I INP K+ + F + R P
Sbjct: 695 FADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKP 749
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 177 bits (432), Expect = 1e-44
Identities = 89/235 (37%), Positives = 144/235 (61%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK A ++ I KPGKP + SYRP+SLLS + KI E+L++ RL F+ + L Q+GF
Sbjct: 465 WKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGF 524
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R+ + + +L +I + ++ + G + DI AFD V H+GL++KL +G P
Sbjct: 525 RNGLNTILPTLKLRNYIKESIQSKQSV--GLVTLDIEAAFDTVWHDGLLHKLKMIGTPIY 582
Query: 369 LVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPRSPETHLAL 548
L+ I+++FL++R F + ++S R L AGVPQGS L P LF+++ +DIP++ L+L
Sbjct: 583 LIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSL 642
Query: 549 FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAXVLFKRGRPP 713
FADD A+Y + S +++ +Q + L +++KW+I INP K+ + F + R P
Sbjct: 643 FADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKP 697
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 169 bits (412), Expect = 3e-42
Identities = 100/247 (40%), Positives = 142/247 (57%), Gaps = 11/247 (4%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK A V I KPGK +NE SYRP+SLLS + K++ERLL KRL+ K + QFGF
Sbjct: 549 WKHAQVKMILKPGKSSNEPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGF 608
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R +H QQ+ R+T+ IL R++ A+F DI++AFD+V H GL+ KL + +P
Sbjct: 609 RKEHGTEQQIARVTQFILEAFERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYN 665
Query: 369 LVLIIRDFLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYINDIP------RS 527
L +I+ +L+NR+F + + G SR Q+ AGVPQGS L PLL+S++ +D+P S
Sbjct: 666 LYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYIYRPS 725
Query: 528 PETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAXVLF-- 695
P + L +ADDT + S + R + + T W KW I +N K+ V+F
Sbjct: 726 PTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIFTL 785
Query: 696 KRGRPPN 716
K P N
Sbjct: 786 KNDLPTN 792
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 168 bits (408), Expect = 1e-41
Identities = 97/238 (40%), Positives = 138/238 (57%), Gaps = 9/238 (3%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK A V I KPGK NE SYRP+SLLS + KI+ERLL KRL+ K + QFGF
Sbjct: 537 WKHAQVKMILKPGKSANEPRSYRPISLLSGLSKIFERLLLKRLFKVDLFKKAIPLHQFGF 596
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R +H QQ+ R+T+ IL R++ A+F DI++AFD+V H GL+ KL + +P
Sbjct: 597 RKEHGSEQQIARVTQFILEAFERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYN 653
Query: 369 LVLIIRDFLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYINDIP------RS 527
L +I+ +L+NR+F + + G SR Q+ AGVPQGS L PLL+S++ +D+P S
Sbjct: 654 LYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYIYRPS 713
Query: 528 PETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAXVLF 695
P + L +ADDT + S + R + + + W KW I +N K+ V+F
Sbjct: 714 PTERIMLSTYADDTIVLSSDTLATAATRNNENYLKSFSDWADKWGISVNAAKTGHVIF 771
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p protein.
Length = 718
Score = 167 bits (406), Expect = 2e-41
Identities = 94/248 (37%), Positives = 136/248 (54%), Gaps = 10/248 (4%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK A +I IHK GK + SYRP+SLL ++GKI ERL+ RL K + QFGF
Sbjct: 296 WKSASIIMIHKTGKTPTDVDSYRPISLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGF 355
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R +H +Q+HR+ L + K+ GA F DI +AFD+V H GL+YK + P +
Sbjct: 356 RLQHGTPEQLHRVVNFALEAM-ENKEYAVGA-FLDIQQAFDRVWHPGLLYKAKRL-FPPQ 412
Query: 369 LVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIP-RSPETH-- 539
L L+++ FL R+F V+G +S + + AGVPQGS L P L+S++ +D+P +P T
Sbjct: 413 LYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVD 472
Query: 540 -----LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAXVLF--K 698
+A +ADDTA+ + + LQ + QW W + IN K A V F +
Sbjct: 473 EEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANR 532
Query: 699 RGRPPNIT 722
G P ++
Sbjct: 533 TGSCPGVS 540
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 166 bits (403), Expect = 4e-41
Identities = 94/248 (37%), Positives = 135/248 (54%), Gaps = 10/248 (4%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK A +I IHK GK + SYRP SLL ++GKI ERL+ RL K + QFGF
Sbjct: 494 WKSASIIMIHKTGKTPTDVDSYRPTSLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGF 553
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R +H +Q+HR+ L + K+ GA F DI +AFD+V H GL+YK + P +
Sbjct: 554 RLQHGTPEQLHRVVNFALEAM-ENKEYAVGA-FLDIQQAFDRVWHPGLLYKAKRL-FPPQ 610
Query: 369 LVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIP-RSPETH-- 539
L L+++ FL R+F V+G +S + + AGVPQGS L P L+S++ +D+P +P T
Sbjct: 611 LYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVD 670
Query: 540 -----LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAXVLF--K 698
+A +ADDTA+ + + LQ + QW W + IN K A V F +
Sbjct: 671 EEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANR 730
Query: 699 RGRPPNIT 722
G P ++
Sbjct: 731 TGSCPGVS 738
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 166 bits (403), Expect = 4e-41
Identities = 94/244 (38%), Positives = 134/244 (54%), Gaps = 7/244 (2%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK + IHKPGKP E +SYRP+SLL +I K++ERL+ R+ + + A I + QFGF
Sbjct: 492 WKLGIISMIHKPGKPEREPASYRPISLLPSISKVFERLIAVRIVSIMEAQGITPEHQFGF 551
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R+ H V+Q+HR+ E IL + ++ +LF DI +AFD+V H GL K+ +P
Sbjct: 552 RAGHCTVEQLHRVVEQILTAYDSKEY--CNSLFLDIREAFDRVWHIGLQLKI-KQTLPAP 608
Query: 369 LVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPRSP-----E 533
+++ +L R F R S + AGVPQGS L PLL+ LY +D+P+ +
Sbjct: 609 YFGLLKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGPLLYCLYSHDMPQPDVSLYGK 668
Query: 534 THLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAXVLF--KRGR 707
+ LA FADD + Y R +Q +W R+W I IN +KS V F KR
Sbjct: 669 SMLATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRWNIGINSSKSNNVCFTLKRRT 728
Query: 708 PPNI 719
PP +
Sbjct: 729 PPPV 732
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 165 bits (402), Expect = 5e-41
Identities = 97/248 (39%), Positives = 142/248 (57%), Gaps = 11/248 (4%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK A V I KPGK N+ SYRP+SLLS + K++ERLL KRL+ K + QFGF
Sbjct: 421 WKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGF 480
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R +H QQ+ R+T+ IL R++ A+F DI++AFD+V H GL+ KL + +P
Sbjct: 481 RKEHGTEQQIARVTQFILEAFERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYN 537
Query: 369 LVLIIRDFLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYINDIP------RS 527
L +I+ +L+NR+F + + G SR Q+ AGVPQGS L P+L+S++ +D+P S
Sbjct: 538 LYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPS 597
Query: 528 PETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAXVLF-- 695
P + L +ADDT + S + R + + T W KW I +N K+ V++
Sbjct: 598 PTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTL 657
Query: 696 KRGRPPNI 719
K P N+
Sbjct: 658 KNDIPTNL 665
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 165 bits (402), Expect = 5e-41
Identities = 97/248 (39%), Positives = 142/248 (57%), Gaps = 11/248 (4%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK A V I KPGK N+ SYRP+SLLS + K++ERLL KRL+ K + QFGF
Sbjct: 537 WKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGF 596
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R +H QQ+ R+T+ IL R++ A+F DI++AFD+V H GL+ KL + +P
Sbjct: 597 RKEHGTEQQIARVTQFILEAFERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYN 653
Query: 369 LVLIIRDFLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYINDIP------RS 527
L +I+ +L+NR+F + + G SR Q+ AGVPQGS L P+L+S++ +D+P S
Sbjct: 654 LYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPS 713
Query: 528 PETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAXVLF-- 695
P + L +ADDT + S + R + + T W KW I +N K+ V++
Sbjct: 714 PTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTL 773
Query: 696 KRGRPPNI 719
K P N+
Sbjct: 774 KNDIPTNL 781
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 165 bits (402), Expect = 5e-41
Identities = 97/248 (39%), Positives = 142/248 (57%), Gaps = 11/248 (4%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK A V I KPGK N+ SYRP+SLLS + K++ERLL KRL+ K + QFGF
Sbjct: 537 WKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGF 596
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R +H QQ+ R+T+ IL R++ A+F DI++AFD+V H GL+ KL + +P
Sbjct: 597 RKEHGTEQQIARVTQFILEAFERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYN 653
Query: 369 LVLIIRDFLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYINDIP------RS 527
L +I+ +L+NR+F + + G SR Q+ AGVPQGS L P+L+S++ +D+P S
Sbjct: 654 LYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPS 713
Query: 528 PETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAXVLF-- 695
P + L +ADDT + S + R + + T W KW I +N K+ V++
Sbjct: 714 PTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTL 773
Query: 696 KRGRPPNI 719
K P N+
Sbjct: 774 KNDIPTNL 781
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 165 bits (402), Expect = 5e-41
Identities = 97/248 (39%), Positives = 142/248 (57%), Gaps = 11/248 (4%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK A V I KPGK N+ SYRP+SLLS + K++ERLL KRL+ K + QFGF
Sbjct: 499 WKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGF 558
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R +H QQ+ R+T+ IL R++ A+F DI++AFD+V H GL+ KL + +P
Sbjct: 559 RKEHGTEQQIARVTQFILEAFERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYN 615
Query: 369 LVLIIRDFLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYINDIP------RS 527
L +I+ +L+NR+F + + G SR Q+ AGVPQGS L P+L+S++ +D+P S
Sbjct: 616 LYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPS 675
Query: 528 PETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAXVLF-- 695
P + L +ADDT + S + R + + T W KW I +N K+ V++
Sbjct: 676 PTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTL 735
Query: 696 KRGRPPNI 719
K P N+
Sbjct: 736 KNDIPTNL 743
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 165 bits (402), Expect = 5e-41
Identities = 97/248 (39%), Positives = 142/248 (57%), Gaps = 11/248 (4%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK A V I KPGK N+ SYRP+SLLS + K++ERLL KRL+ K + QFGF
Sbjct: 537 WKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGF 596
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R +H QQ+ R+T+ IL R++ A+F DI++AFD+V H GL+ KL + +P
Sbjct: 597 RKEHGTEQQIARVTQFILEAFERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYN 653
Query: 369 LVLIIRDFLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYINDIP------RS 527
L +I+ +L+NR+F + + G SR Q+ AGVPQGS L P+L+S++ +D+P S
Sbjct: 654 LYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHIYHPS 713
Query: 528 PETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAXVLF-- 695
P + L +ADDT + S + R + + T W KW I +N K+ V++
Sbjct: 714 PTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTL 773
Query: 696 KRGRPPNI 719
K P N+
Sbjct: 774 KNDIPTNL 781
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 163 bits (395), Expect = 4e-40
Identities = 88/244 (36%), Positives = 136/244 (55%), Gaps = 3/244 (1%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK++ ++ I KPGK + SSYRP+SLL+ + K++E++L R+ + N L QFGF
Sbjct: 488 WKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGF 547
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R KH ++QV+R+T I R+ A+F D+A+AFD+V +GL++K+ + +P
Sbjct: 548 REKHGTIEQVNRITSEIRTAFEHREYCT--AIFLDVAQAFDRVWLDGLLFKIIKL-LPQN 604
Query: 369 LVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPRSPETHLAL 548
+++ +L NR F R + + SR + AGVPQGS L P+L++LY D P +
Sbjct: 605 THKLLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNLTTST 664
Query: 549 FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAXVLF---KRGRPPNI 719
FADDTAI + L + ++ +W WRI IN K V F K+ PP +
Sbjct: 665 FADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTFTLNKQTCPPLV 724
Query: 720 TSXI 731
+ I
Sbjct: 725 LNNI 728
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 160 bits (389), Expect = 2e-39
Identities = 87/244 (35%), Positives = 135/244 (55%), Gaps = 3/244 (1%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK++ ++ I KPGK + SSYRP+SLL+ + K++E++L R+ + N L QFGF
Sbjct: 488 WKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGF 547
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R KH ++QV+R+T I R+ A+F D+A+AFD+V +GL++K+ + +P
Sbjct: 548 REKHGTIEQVNRITSEIRTAFEHREYCT--AIFLDVAQAFDRVWLDGLLFKIIKL-LPQN 604
Query: 369 LVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPRSPETHLAL 548
+++ +L N F R + + SR + AGVPQGS L P+L++LY D P +
Sbjct: 605 THKLLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNLTTST 664
Query: 549 FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAXVLF---KRGRPPNI 719
FADDTAI + L + ++ +W WRI IN K V F K+ PP +
Sbjct: 665 FADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTFTLNKQTCPPLV 724
Query: 720 TSXI 731
+ I
Sbjct: 725 LNNI 728
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 158 bits (383), Expect = 1e-38
Identities = 89/244 (36%), Positives = 131/244 (53%), Gaps = 3/244 (1%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK +I I KPGK SSYRP+SLLS I K++E+ L RL T + I+ QFGF
Sbjct: 490 WKMMKIIMIPKPGKNHTVASSYRPISLLSCISKLFEKCLLIRLNQHQTYHNIIPAHQFGF 549
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R H ++QV+R+T I R+ A+F D+++AFDKV +GL++K+ + +P+
Sbjct: 550 RESHGTIEQVNRITTEIRTAFEYREYCT--AVFLDVSQAFDKVWLDGLMFKI-KISLPES 606
Query: 369 LVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPRSPETHLAL 548
+++ +L +R F R S + AGVPQGS L P L+ +Y DIP + ++
Sbjct: 607 THKLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTLYLIYTADIPTNSRLTVST 666
Query: 549 FADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAXVLFKRGR---PPNI 719
FADDTAI R +L + + + +W WRI +N K V F R PP +
Sbjct: 667 FADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNEQKCKHVTFTLNRQDCPPLL 726
Query: 720 TSXI 731
+ I
Sbjct: 727 LNSI 730
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 158 bits (383), Expect = 1e-38
Identities = 95/246 (38%), Positives = 137/246 (55%), Gaps = 17/246 (6%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK A + I KPGK +SYRP+SLLS + K+ ER+L KRL++ + K + QFGF
Sbjct: 93 WKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGF 152
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R H Q+ R+T+ IL + + A F DI +AFD+V H+GL+YKL + +P
Sbjct: 153 RKDHGAEHQLARVTQFILKAFDEKDVC--SATFLDITEAFDRVWHDGLLYKLSRL-IPRY 209
Query: 369 LVLIIRDFLSNRSFRYRVEG-TRSRPRQLTAGVPQGSALSPLLFSLYINDIPRS------ 527
L ++ ++LSNR+F R++G T SR + AGVPQGS L P+L+S+Y +D+P
Sbjct: 210 LFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIVKDYM 269
Query: 528 -----PETH-----LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTK 677
P+ H LA +ADDT I + L Q + +W +KW I IN K
Sbjct: 270 RNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKK 329
Query: 678 SAXVLF 695
+ +LF
Sbjct: 330 TGHILF 335
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 158 bits (383), Expect = 1e-38
Identities = 95/246 (38%), Positives = 137/246 (55%), Gaps = 17/246 (6%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK A + I KPGK +SYRP+SLLS + K+ ER+L KRL++ + K + QFGF
Sbjct: 540 WKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILPKRLYDIDSFAKAIPSHQFGF 599
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R H Q+ R+T+ IL + + A F DI +AFD+V H+GL+YKL + +P
Sbjct: 600 RKDHGAEHQLARVTQFILKAFDEKDVC--SATFLDITEAFDRVWHDGLLYKLSRL-IPRY 656
Query: 369 LVLIIRDFLSNRSFRYRVEG-TRSRPRQLTAGVPQGSALSPLLFSLYINDIPRS------ 527
L ++ ++LSNR+F R++G T SR + AGVPQGS L P+L+S+Y +D+P
Sbjct: 657 LFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIVKDYM 716
Query: 528 -----PETH-----LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTK 677
P+ H LA +ADDT I + L Q + +W +KW I IN K
Sbjct: 717 RNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKK 776
Query: 678 SAXVLF 695
+ +LF
Sbjct: 777 TGHILF 782
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 158 bits (383), Expect = 1e-38
Identities = 95/246 (38%), Positives = 137/246 (55%), Gaps = 17/246 (6%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK A + I KPGK +SYRP+SLLS + K+ ER+L KRL++ + K + QFGF
Sbjct: 540 WKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGF 599
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R H Q+ R+T+ IL + + A F DI +AFD+V H+GL+YKL + +P
Sbjct: 600 RKDHGAEHQLARVTQFILKAFDEKDVC--SATFLDITEAFDRVWHDGLLYKLSRL-IPRY 656
Query: 369 LVLIIRDFLSNRSFRYRVEG-TRSRPRQLTAGVPQGSALSPLLFSLYINDIPRS------ 527
L ++ ++LSNR+F R++G T SR + AGVPQGS L P+L+S+Y +D+P
Sbjct: 657 LFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIVKDYM 716
Query: 528 -----PETH-----LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTK 677
P+ H LA +ADDT I + L Q + +W +KW I IN K
Sbjct: 717 RNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKK 776
Query: 678 SAXVLF 695
+ +LF
Sbjct: 777 TGHILF 782
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 158 bits (383), Expect = 1e-38
Identities = 95/246 (38%), Positives = 137/246 (55%), Gaps = 17/246 (6%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK A + I KPGK +SYRP+SLLS + K+ ER+L KRL++ + K + QFGF
Sbjct: 540 WKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGF 599
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R H Q+ R+T+ IL + + A F DI +AFD+V H+GL+YKL + +P
Sbjct: 600 RKDHGAEHQLARVTQFILKAFDEKDVC--SATFLDITEAFDRVWHDGLLYKLSRL-IPRY 656
Query: 369 LVLIIRDFLSNRSFRYRVEG-TRSRPRQLTAGVPQGSALSPLLFSLYINDIPRS------ 527
L ++ ++LSNR+F R++G T SR + AGVPQGS L P+L+S+Y +D+P
Sbjct: 657 LFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIVKDYM 716
Query: 528 -----PETH-----LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTK 677
P+ H LA +ADDT I + L Q + +W +KW I IN K
Sbjct: 717 RNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKK 776
Query: 678 SAXVLF 695
+ +LF
Sbjct: 777 TGHILF 782
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 131 bits (317), Expect = 1e-30
Identities = 70/187 (37%), Positives = 111/187 (59%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK++ +I I KP K + S YRP+SLL+ + K++E+ L R+ + + L QF F
Sbjct: 30 WKKSIIIMIPKPEKDKTQPS-YRPISLLTCLSKLFEKGLLLRISPHLKTHNTLPSYQFDF 88
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
+KH ++QV+R+T I R+ ALF D+A+AFD+V +GL++K+ + +P
Sbjct: 89 PAKHGAIEQVNRITTEIRTAFEHREYCT--ALFLDVAQAFDRVWLDGLMFKIIQL-LPQN 145
Query: 369 LVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPRSPETHLAL 548
+ +++ +L R F R + S + AGVPQGS L P+L++LY DIP + + +
Sbjct: 146 IHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGPILYTLYTADIPTNYQLTIFT 205
Query: 549 FADDTAI 569
FADDTAI
Sbjct: 206 FADDTAI 212
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 131 bits (316), Expect = 1e-30
Identities = 68/215 (31%), Positives = 118/215 (54%), Gaps = 4/215 (1%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
W+ A +I I KP KP ++ +SYRP+SLLS +GK E+++ +RL F+ + ++ Q F
Sbjct: 492 WRSAIIIPISKPNKPPSDINSYRPISLLSCLGKTLEKIIAQRLTWFIKRHNLISHNQVAF 551
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
+S HS + + R+ L+ + + L D +AFD+V + ++ +L G+ R
Sbjct: 552 KSNHSTMDALLRIQHFASNALSTKNHV--SILATDFERAFDRVGIHAVLCRLERWGIGPR 609
Query: 369 LVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDI----PRSPET 536
L +I+ F++NRSFR R+ S L G+PQGS LS +LF + I DI R +
Sbjct: 610 LYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQGSPLSVVLFMIAIEDINDIVTRHKDI 669
Query: 537 HLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQW 641
+++L+ADD I+ + ++ + + + + W
Sbjct: 670 YISLYADDAIIFTKIKNINTVREKFLEILQEINSW 704
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 102 bits (244), Expect = 7e-22
Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
+K + +I I KP +TSSYRP+SL I KI ++++ KRLW VT N ++ D+QFGF
Sbjct: 487 YKTSLIIPILKPNTDKTKTSSYRPISLNCCIAKILDKIIAKRLWWLVTYNNLINDKQFGF 546
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
+ K ++++ + ++ T + D ++AFD+V + +I +L +
Sbjct: 547 K-KGKSTSDCLLYVDYLI----TKSKMHTSLVTLDFSRAFDRVGVHSIIQQLQEWKTGPK 601
Query: 369 LVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPRSPETHLAL 548
++ I++F+SNR RV S P L G+PQGS +S +LF + N + H +
Sbjct: 602 IIKYIKNFMSNRKITVRVGPHTSSPLPLFNGIPQGSPISVILFLIAFNKLSNIISLHKEI 661
Query: 549 ----FADD 560
+ADD
Sbjct: 662 KFNAYADD 669
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 95.9 bits (228), Expect = 6e-20
Identities = 70/239 (29%), Positives = 116/239 (48%), Gaps = 11/239 (4%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK+ ++ + K P N SYRP+ LL +GK++ER+L R+ + L +Q+GF
Sbjct: 458 WKKMKLVLLLKGKGPANVPRSYRPLCLLDIVGKLFERILYARIELITESPTGLQGQQYGF 517
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIP-----TGALFFDIAKAFDKV*HNGLIYKLYNM 353
R S + + +T+ L+ + + + D+ AF+ ++ + N+
Sbjct: 518 RKGKSTLDALKSVTDAARKALDGNRWLGGSKKYCAIITLDVKNAFNTARWPIILGAMRNL 577
Query: 354 GVPDRLVLIIRDFLSNRSFRYRVE-GTRSRPRQLTAGVPQGSALSPLLFSLYINDI---- 518
GVPD + +I ++ +R Y E G RS Q++AGVPQGS L P+L+++ + I
Sbjct: 578 GVPDYIRGVIGNYFRDRVLWYVTEDGPRS--HQVSAGVPQGSVLGPILWNIMYDGILSIS 635
Query: 519 -PRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAXVL 692
PR E H FADD AI + + L +A+ +W K + I K+ VL
Sbjct: 636 KPRGVELH--CFADDVAITAVAKTIPELQDISNVAITAAIEWLEKVGLKIAAHKTEVVL 692
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 58.0 bits (134), Expect = 2e-08
Identities = 59/234 (25%), Positives = 102/234 (43%), Gaps = 4/234 (1%)
Frame = +3
Query: 9 WKEADVIGIHK-PGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFG 185
WK V+ + K P K E SSYR + LL GK+ E ++ R+ + QFG
Sbjct: 490 WKCPRVVSLLKGPDKDKCEPSSYRGICLLPVFGKVLEAIMVNRVREVLPEG---CRWQFG 546
Query: 186 FRSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPD 365
FR + CV+ R H+ + F D AFD V + + +L ++G
Sbjct: 547 FR-QGRCVEDAWR---HVKSSVGASAAQYVLGTFVDFKGAFDNVEWSAALSRLADLGC-- 600
Query: 366 RLVLIIRDFLSNRSFRYR-VEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPR--SPET 536
R + + + F S R R GT P +T G PQGS P ++ + ++ + + P
Sbjct: 601 REMGLWQSFFSGRRAVIRSSSGTVEVP--VTRGCPQGSISGPFIWDILMDVLLQRLQPYC 658
Query: 537 HLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAXVLFK 698
L+ +ADD + ++L + ++ + W + ++ +K+ +L K
Sbjct: 659 QLSAYADDLLLLVEGNSRAVLEEKGAQLMSIVETWGAEVGDCLSTSKTVIMLLK 712
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 48.4 bits (110), Expect = 1e-05
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 3/118 (2%)
Frame = +3
Query: 348 NMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPRS 527
N P LV IR + SNR R Q+T GVPQGS L PLL++ + I R
Sbjct: 14 NFSDPAYLVRFIRSYSSNRVLPCESSEGVFR-HQVTGGVPQGSVLGPLLWNTMYDGILRL 72
Query: 528 P---ETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAXVL 692
P + + FADD A+ + + + W +++ P K+ VL
Sbjct: 73 PLVGRSEIVGFADDVALLVVDKYPGKAEEMCNRNIRAIEHWLSSMGLELAPEKTKAVL 130
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 39.9 bits (89), Expect = 0.004
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 11/109 (10%)
Frame = +3
Query: 291 DIAKAFDKV*HNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQ 470
D++KAFD + H + L G P V +++ +G S GV Q
Sbjct: 482 DVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGVKQ 541
Query: 471 GSALSPLLFSLYINDIPRS-PE----------THLALFADDTAIYYSCR 584
G LSP+LF+L ++ + R+ P T+ A FADD ++ R
Sbjct: 542 GDPLSPILFNLVMDRLLRTLPSEIGAKVGNAITNAAAFADDLVLFAETR 590
>BT022902-1|AAY55318.1| 571|Drosophila melanogaster IP12601p
protein.
Length = 571
Score = 30.3 bits (65), Expect = 3.5
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = -2
Query: 620 CDLESPMKQRHLPTRVVDSRVIGEER*MGLR--RPGYIIDIQTK**RGERGALRDSGGQL 447
CD +SP R+ R V + V +GLR + I +Q + GE L D G
Sbjct: 327 CDDQSPQSDRYFNLRPVIADVKNNRVVVGLRFVKRNRIFHLQVQ--EGELLPLGDINGTT 384
Query: 446 TGTRTSSLYSISKRTVRQEVSY 381
+ YSIS + V + V Y
Sbjct: 385 LRWKPVDSYSISDKDVSENVDY 406
>BT022891-1|AAY55307.1| 579|Drosophila melanogaster IP12501p
protein.
Length = 579
Score = 30.3 bits (65), Expect = 3.5
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = -2
Query: 620 CDLESPMKQRHLPTRVVDSRVIGEER*MGLR--RPGYIIDIQTK**RGERGALRDSGGQL 447
CD +SP R+ R V + V +GLR + I +Q + GE L D G
Sbjct: 335 CDDQSPQSDRYFNLRPVIADVKNNRVVVGLRFVKRNRIFHLQVQ--EGELLPLGDINGTT 392
Query: 446 TGTRTSSLYSISKRTVRQEVSY 381
+ YSIS + V + V Y
Sbjct: 393 LRWKPVDSYSISDKDVSENVDY 414
>AE014134-304|AAF51336.2| 482|Drosophila melanogaster CG31664-PA
protein.
Length = 482
Score = 30.3 bits (65), Expect = 3.5
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = -2
Query: 620 CDLESPMKQRHLPTRVVDSRVIGEER*MGLR--RPGYIIDIQTK**RGERGALRDSGGQL 447
CD +SP R+ R V + V +GLR + I +Q + GE L D G
Sbjct: 238 CDDQSPQSDRYFNLRPVIADVKNNRVVVGLRFVKRNRIFHLQVQ--EGELLPLGDINGTT 295
Query: 446 TGTRTSSLYSISKRTVRQEVSY 381
+ YSIS + V + V Y
Sbjct: 296 LRWKPVDSYSISDKDVSENVDY 317
>DQ168463-1|AAZ81897.1| 1522|Drosophila melanogaster BBG-LP12
protein.
Length = 1522
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +2
Query: 596 ASSATPDRSSHPGTVVPEVANRHQPHEKRXGALQKGSPSEH 718
+SS++P SS TV+P+VA + QP+E+R L + + H
Sbjct: 846 SSSSSP--SSCSSTVIPDVAFKLQPYEERDDILSEPITTIH 884
>DQ168462-1|AAZ81896.1| 1842|Drosophila melanogaster PDZ
domain-containing proteinBBG-LP10 protein.
Length = 1842
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 599 SSATPDRSSHPGTVVPEVANRHQPHEKRXGALQKGSPSEH 718
+S++ SS TV+P+VA + QP+E+R L + + H
Sbjct: 64 TSSSSSSSSCSSTVIPDVAFKLQPYEERDDILSEPITTIH 103
>AE014296-2385|AAF49738.1| 1552|Drosophila melanogaster CG9587-PA
protein.
Length = 1552
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 599 SSATPDRSSHPGTVVPEVANRHQPHEKRXGALQKGSPSEH 718
+S++ SS TV+P+VA + QP+E+R L + + H
Sbjct: 859 TSSSSSSSSCSSTVIPDVAFKLQPYEERDDILSEPITTIH 898
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,300,450
Number of Sequences: 53049
Number of extensions: 831628
Number of successful extensions: 2328
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2265
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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