Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_F22
(849 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 123 1e-28
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 97 2e-20
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 71 1e-12
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 71 1e-12
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 71 1e-12
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 61 1e-09
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 58 1e-08
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 42 4e-04
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 37 0.016
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 28 7.3
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 123 bits (297), Expect = 1e-28
Identities = 78/232 (33%), Positives = 123/232 (53%), Gaps = 3/232 (1%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK+A+VI I KP K SSYRP+SLLS I K+ E+ + KR+ N + + Q GF
Sbjct: 384 WKKANVIMIPKPKKDPAIASSYRPISLLSPIAKLLEKAILKRIKNSIESPA----HQHGF 439
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALF--FDIAKAFDKV*HNGLIYKLYN-MGV 359
+ +HS V ++T I+ GLN K P A+ D+ AFDKV L L G+
Sbjct: 440 KPEHSTTTAVIQVTNDIIGGLNM-KNPPERAIMACLDLRAAFDKVPTKKLCNDLMEAQGI 498
Query: 360 PDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPRSPETH 539
++ L + ++L R R + S+ L GVPQGS +SP LF+ Y+ D+P +T
Sbjct: 499 EPKIKLWLGNYLHKRLIRTSHDNHWSKWHTLLGGVPQGSVISPNLFTFYLKDMPTQQDTM 558
Query: 540 LALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSAXVLF 695
L +ADD +I +K+ ++Q+ + + ++ ++ + I+ KS +F
Sbjct: 559 LISYADDMSIIARDKKIEKAAEKVQLHIDEIAKYLKERGMSISAEKSTVTVF 610
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 96.7 bits (230), Expect = 2e-20
Identities = 54/144 (37%), Positives = 83/144 (57%), Gaps = 2/144 (1%)
Frame = +3
Query: 282 LFFDIAKAFDKV*HNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAG 461
++ D +KAFD++ H+ L+ KL ++ L++ + +FLSNRSFR R+ T S + T G
Sbjct: 17 IYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATCG 76
Query: 462 VPQGSALSPLLFSLYINDIPRSPETHLAL--FADDTAIYYSCRKMSLLHRRLQIAVATLG 635
VPQG+ LSPLLF +Y+NDI +A FADDT +Y S K LQ A+ +
Sbjct: 77 VPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDTKLYASTPKTE-SENNLQSALDAVV 135
Query: 636 QWFRKWRIDINPTKSAXVLFKRGR 707
W + ++ +N +K+ V + R
Sbjct: 136 DWTKGSKLTLNQSKTVHVTVGKRR 159
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 70.9 bits (166), Expect = 1e-12
Identities = 50/172 (29%), Positives = 78/172 (45%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK + I K G N +YRP+ LL + K++ + L R+ + + + EQ GF
Sbjct: 603 WKTSKTTLIFKKGDREN-LENYRPICLLPVLYKVFTKCLLNRMRRSLDEAQPV--EQAGF 659
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R S + +H L + +G R QIP +F D KAFD V H + L G
Sbjct: 660 RRSFSTIDHIHSLQRLLEVG--REYQIPLTLVFIDFKKAFDSVEHQAIWKSLDEQGADGA 717
Query: 369 LVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPR 524
+ ++++ N + + R +T GV QG +SP LFS + + R
Sbjct: 718 YIDLLKECYKNCTTNF-TPFHRPVAVPVTKGVRQGDPISPNLFSACLEHVFR 768
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 70.9 bits (166), Expect = 1e-12
Identities = 50/172 (29%), Positives = 78/172 (45%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK + I K G N +YRP+ LL + K++ + L R+ + + + EQ GF
Sbjct: 342 WKTSKTTLIFKKGDREN-LENYRPICLLPVLYKVFTKCLLNRMRRSLDEAQPV--EQAGF 398
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R S + +H L + +G R QIP +F D KAFD V H + L G
Sbjct: 399 RRSFSTIDHIHSLQRLLEVG--REYQIPLTLVFIDFKKAFDSVEHQAIWKSLDEQGADGA 456
Query: 369 LVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPR 524
+ ++++ N + + R +T GV QG +SP LFS + + R
Sbjct: 457 YIDLLKECYKNCTTNF-TPFHRPVAVPVTKGVRQGDPISPNLFSACLEHVFR 507
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 70.5 bits (165), Expect = 1e-12
Identities = 50/172 (29%), Positives = 78/172 (45%)
Frame = +3
Query: 9 WKEADVIGIHKPGKPTNETSSYRPVSLLSTIGKIYERLLRKRLWNFVTANKILIDEQFGF 188
WK + I K G N +YRP+ LL + K++ + L R+ + + + EQ GF
Sbjct: 432 WKTSKTTLIFKKGDREN-LENYRPICLLPVLYKVFTKCLLNRMRRSLDEAQPV--EQAGF 488
Query: 189 RSKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFDIAKAFDKV*HNGLIYKLYNMGVPDR 368
R S + +H L + +G R QIP +F D KAFD V H + L G
Sbjct: 489 RRSFSTIDHIHSLQRLLEVG--REYQIPLTLVFIDFKKAFDTVEHQAIWKSLDEQGADGA 546
Query: 369 LVLIIRDFLSNRSFRYRVEGTRSRPRQLTAGVPQGSALSPLLFSLYINDIPR 524
+ ++++ N + + R +T GV QG +SP LFS + + R
Sbjct: 547 YIDLLKECYKNCTTNF-TPFHRPVAVPVTKGVRQGDPISPNLFSACLEHVFR 597
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 60.9 bits (141), Expect = 1e-09
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Frame = +3
Query: 300 KAFDKV*HNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEG-TRSRPRQLTAGVPQGS 476
KAFD+V H+ L+ KL++ G+ DFLS+R+F +V +++GVP+GS
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 477 ALSPLLFSLYINDIPRS--PETHLALFADDTAIY 572
P LF ++IN + S P + FADD +Y
Sbjct: 62 VSGPFLFLIFINSLLLSVPPSISCSAFADDLKVY 95
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 57.6 bits (133), Expect = 1e-08
Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 3/118 (2%)
Frame = +3
Query: 339 KLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQ-LTAGVPQGSALSPLLFSLYIND 515
KL G+ ++FL NR+F ++ S+ +++GVPQGS PLLF L+IN+
Sbjct: 839 KLAKFGLDSLTCSWYKEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGPLLFILFINN 898
Query: 516 --IPRSPETHLALFADDTAIYYSCRKMSLLHRRLQIAVATLGQWFRKWRIDINPTKSA 683
I +P +++ FADD I+++ +++ + I V+ W + + + PTKSA
Sbjct: 899 LLIDLAPTINISCFADDVKIFHT--DPTIIQNSIDIIVS----WSKLNELPLAPTKSA 950
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Frame = +3
Query: 282 LFFDIAKAFDKV*HNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRV-EGTRSRPRQLTA 458
+ F ++ AFDKV H LI KL + V L R +S ++F +V + S
Sbjct: 890 IHFKLSTAFDKVPHEFLISKLNDFNVHPTLRNWFRKLMSPKTFSVQVNDHLESEKHNCQI 949
Query: 459 GVPQGSALSPLLFSLYIN----DIPRSPETHLALFADDTAIY 572
G P+GS +F ++IN +IP + ++D IY
Sbjct: 950 GAPRGSESRQFMFLVFINSLLCEIPINISCSACAISEDLEIY 991
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 37.1 bits (82), Expect = 0.016
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = +3
Query: 282 LFFDIAKAFDKV*HNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRQLTAG 461
+F D KAFD V H + L G + + ++++ N + + R +T G
Sbjct: 40 VFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYKNCTTNF-TPFLRPITVPVTKG 98
Query: 462 VPQGSALSPLLFSLYINDIPR 524
V QG +SP LFS + + R
Sbjct: 99 VRQGDPISPNLFSACLEHVFR 119
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 517 ISLIYKLNSNGESAEPCGTPAVS*RGRER 431
ISL S GE +PCGTP + G E+
Sbjct: 50 ISLTNMPKSTGERTDPCGTPHTAFLGSEK 78
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,742,215
Number of Sequences: 27780
Number of extensions: 413214
Number of successful extensions: 1090
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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