Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_F22
         (849 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g30310.1 68415.m03689 GDSL-motif lipase/hydrolase family prot...    28   9.0  
At1g80130.1 68414.m09379 expressed protein                             28   9.0  

>At2g30310.1 68415.m03689 GDSL-motif lipase/hydrolase family protein
           similar to family II lipases EXL3 GI:15054386, EXL1
           GI:15054382 from [Arabidopsis thaliana]; contains Pfam
           profile PF00657: GDSL-like Lipase/Acylhydrolase
          Length = 359

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 1/80 (1%)
 Frame = -3

Query: 439 RERVPSTRYRNERFDKKSRMMSTSLSGTPMLYSL*IKPLCQTLSNAFAMSKKRAPVGIC- 263
           +E   S  Y N++  KK   +  SL G+  LY+    PL   + N      K    G C 
Sbjct: 248 QENKDSVLY-NQKLVKKLPEIQASLPGSNFLYANVYDPLMDMIQNPSKYGFKETKKGCCG 306

Query: 262 LRLFSPIRMCSVRRCTCCTH 203
                   MC+    TC  H
Sbjct: 307 TGYLETTFMCNPLTKTCPNH 326


>At1g80130.1 68414.m09379 expressed protein
          Length = 305

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
 Frame = -3

Query: 700 LLKSTXALFVGLMSIRHF-RNHCPRVATAIWSRR*SSDIFLHE**IAVSSAKSARWVSGD 524
           LL+ST A  +     +H  R   P   + +W R  S  +F  +     +  +  + +S +
Sbjct: 2   LLRSTSAPILNSWLPQHCSRESSPEPESQLWRRSTSLSLFSSKSIDGHTGEQLHQALSDN 61

Query: 523 RGISLIYKLNSNGESAEPCGTPAVS*RGRERVPSTRYRNERFDKKS 386
           + I +I K  SN  S +   TP  S + R  +  TRY  +  D+ S
Sbjct: 62  KEI-IILKSKSNEHSYK---TPTSSRQRRSSLDETRYTKKTLDRSS 103


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,699,348
Number of Sequences: 28952
Number of extensions: 383567
Number of successful extensions: 994
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1970388800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)