Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_F20
(767 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 38 9e-05
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 38 9e-05
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 38 9e-05
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 37 2e-04
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 37 2e-04
AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombi... 25 0.50
AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory recept... 23 2.7
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 21 8.2
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 8.2
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 37.9 bits (84), Expect = 9e-05
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 241 ESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 387
E + A L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 45 EKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYN 94
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 37.9 bits (84), Expect = 9e-05
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 241 ESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 387
E + A L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 45 EKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYN 94
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 37.9 bits (84), Expect = 9e-05
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 241 ESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 387
E + A L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 45 EKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYN 94
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 36.7 bits (81), Expect = 2e-04
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 387
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYN 94
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 36.7 bits (81), Expect = 2e-04
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 387
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYN 94
>AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine
recombinase protein.
Length = 340
Score = 25.4 bits (53), Expect = 0.50
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = -3
Query: 234 MLACLKCRVRLTTILESGGESRSYVARSESIMRDSDVAFSHSAALVIAQ 88
+++ L C + T +L S GE+R ++ + S + S +V+A+
Sbjct: 228 VVSTLSCYLERTELLRSSGETRLFLTHRKPFHPASTQSLSRWIKMVLAE 276
>AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory receptor
candidate 27 protein.
Length = 346
Score = 23.0 bits (47), Expect = 2.7
Identities = 12/56 (21%), Positives = 23/56 (41%)
Frame = +2
Query: 35 SCHKMSTTYIILLPFLLTCAITSAAECENATSLSLMIDSLLATYDRDSPPDSKIVV 202
+C ++ T + F TC I +CE + +D ++ R+ KI +
Sbjct: 174 ACISIAYTNVSTDAFFYTCLIQIETQCEIVSDTLRNLDKIVTNGFRNVAESRKIFI 229
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 314 QGSGAAALGWCPRN 355
+ S A ALGW P N
Sbjct: 153 KASTAQALGWAPTN 166
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.4 bits (43), Expect = 8.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 115 AFCRTSYSTSEEKR*QNNIS 56
A C YST EEK Q N S
Sbjct: 1374 AVCDACYSTIEEKNLQVNES 1393
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,744
Number of Sequences: 336
Number of extensions: 3045
Number of successful extensions: 24
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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