Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_F20
(767 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 40 2e-05
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 40 2e-05
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 40 2e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 40 2e-05
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 40 2e-05
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 40 2e-05
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 40 2e-05
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 40 2e-05
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 40 3e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 39 6e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 39 6e-05
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 39 6e-05
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 39 6e-05
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 38 8e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 37 2e-04
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 36 5e-04
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 34 0.001
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 33 0.003
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 33 0.004
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 28 0.083
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 1.0
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.1
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 7.2
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 7.2
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 7.2
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 21 9.5
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 40.3 bits (90), Expect = 2e-05
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 241 ESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 387
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN 77
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 40.3 bits (90), Expect = 2e-05
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 241 ESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 387
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN 77
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 40.3 bits (90), Expect = 2e-05
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 241 ESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 387
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN 77
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 40.3 bits (90), Expect = 2e-05
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 241 ESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 387
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN 77
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 40.3 bits (90), Expect = 2e-05
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 241 ESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 387
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN 77
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 40.3 bits (90), Expect = 2e-05
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 241 ESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 387
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN 77
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 40.3 bits (90), Expect = 2e-05
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 241 ESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 387
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N
Sbjct: 96 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN 145
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 40.3 bits (90), Expect = 2e-05
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 241 ESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 387
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N
Sbjct: 96 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN 145
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 39.5 bits (88), Expect = 3e-05
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 387
++ +W D +L W+ E+G L V S+ +WRPD+VL N
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYN 115
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 38.7 bits (86), Expect = 6e-05
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 387
++ +W D +L W E+G L V S+ +WRPD+VL N
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYN 119
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 38.7 bits (86), Expect = 6e-05
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 387
++ +W D +L W E+G L V S+ +WRPD+VL N
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYN 119
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 38.7 bits (86), Expect = 6e-05
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 387
++ W D +L WN ++G T V SE +W PD+VL N
Sbjct: 73 VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYN 111
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 38.7 bits (86), Expect = 6e-05
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 387
++ W D +L WN E+G L V SE +W PD+VL N
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYN 124
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 38.3 bits (85), Expect = 8e-05
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 387
L+ W D + W+ E+G T L V SE +W PD+VL N
Sbjct: 73 LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYN 111
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 37.1 bits (82), Expect = 2e-04
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 286 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 387
W D L WNA E+ G V R+WRPD +L N
Sbjct: 62 WTDHHLKWNASEFAGIRVIRVPYNRVWRPDTILYN 96
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 35.5 bits (78), Expect = 5e-04
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 274 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 387
L++ W D + WN ++G L + RLW+PDV++ N
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYN 114
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 34.3 bits (75), Expect = 0.001
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 214 AFETC*HFXESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 387
AF + E ++ L+ W D +L W+ ++G + +++W+PD+VL N
Sbjct: 59 AFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFN 117
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 33.1 bits (72), Expect = 0.003
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 235 FXESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 387
F + S + + + + + W D LSW ++ G + V S+ +W PD+ + N
Sbjct: 82 FDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYN 133
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.004
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +1
Query: 241 ESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 387
E + T + + +W+D+RL++ G+ + + R+W+PD N
Sbjct: 46 EVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 28.3 bits (60), Expect = 0.083
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 277 QMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 387
+ +W D RLS+ S + ER+WRPD N
Sbjct: 90 RQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 24.6 bits (51), Expect = 1.0
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 59 YIILLPFLLTCAITS-AAECENATSLSLMIDSLLAT 163
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 339 PSAAAPLPCVPTQS 298
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 416 ALRARVSNNGSVSWNKAL 469
ALR N G ++W K +
Sbjct: 240 ALRCLAHNGGEIAWTKVI 257
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 416 ALRARVSNNGSVSWNKAL 469
ALR N G ++W K +
Sbjct: 240 ALRCLAHNGGEIAWTKVI 257
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +2
Query: 416 ALRARVSNNGSVSWNKAL 469
ALR N G ++W K +
Sbjct: 240 ALRCLAHNGGEIAWTKVI 257
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.4 bits (43), Expect = 9.5
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 116 ENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANISVSP 247
+NA S +S+ A R+S S ++ + H R S+SP
Sbjct: 694 KNADSREYRSNSMGAVMTRNSEMFSSLLSDTEQHFRQHRDSLSP 737
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,056
Number of Sequences: 438
Number of extensions: 3555
Number of successful extensions: 43
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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