Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_F18
         (909 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    29   0.26 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   4.2  

>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 28.7 bits (61), Expect = 0.26
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = +2

Query: 8   FTRDSFK*ISXRKMSDDLYXXSXQFSPHXLL*LVRQNAKTQHHCPS*STRSSQGTIGTPP 187
           FTR SF  ++   + DD         P  L  +V ++A   H  P  S  + QG+  + P
Sbjct: 793 FTRQSFAILNEMAVDDDGATVDEHHDPQKLRIVVSKSANAMHP-PRGSRHTRQGSEASSP 851

Query: 188 P 190
           P
Sbjct: 852 P 852


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 263 ANTXRSSNEXDRQXXXXXXXGVGLRHLAGVLGNAC 367
           +N  R++ + DR+       GVG    AGV G  C
Sbjct: 588 SNHHRTTEQADREASVCAAGGVGAAAAAGVGGLGC 622


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,390
Number of Sequences: 2352
Number of extensions: 7079
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98401338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)