Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_F17
(940 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 60 3e-09
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 59 6e-09
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 56 3e-08
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 52 7e-07
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 51 1e-06
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 48 8e-06
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 48 1e-05
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 48 1e-05
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 46 4e-05
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 1e-04
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 45 1e-04
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 1e-04
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 44 2e-04
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 44 2e-04
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 43 3e-04
SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06) 40 0.002
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 39 0.005
SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22) 38 0.009
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.012
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) 38 0.012
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 38 0.015
SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022) 37 0.027
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.027
SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 34 0.14
SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 33 0.33
SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07) 33 0.33
SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 33 0.33
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 32 0.77
SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92) 31 1.3
SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11) 31 1.8
SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043) 30 2.4
SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8) 30 2.4
SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15) 29 4.1
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0) 29 5.4
SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) 29 5.4
SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10) 28 9.5
SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06) 28 9.5
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 60.1 bits (139), Expect = 3e-09
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Frame = +2
Query: 206 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLL 382
LTL+ H ++E ++ L+ W D RL+WN E+G + S+ +W PD+ +L
Sbjct: 22 LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80
Query: 383 NAAAXTAG--DYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKFG 541
N+A + +R +++ G V W+ L + T M + +P D Q C +FG
Sbjct: 81 NSANKDMDLREKNIRLFINSAGEVLWMNPLILHTSCGMDIAHFPFDNQACELRFG 135
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 58.8 bits (136), Expect = 6e-09
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Frame = +2
Query: 284 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAAXTAGD--YALRAR--VSNNGSV 448
W + LSWNA E+G S + ++LW+PD+ L N A +A Y +A+ VS+ G
Sbjct: 119 WKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYNNADSSADGSLYGFKAKIKVSHTGLN 178
Query: 449 SWIKRLDISTPISMQLDXWPNDMQTCTXKFG 541
W+ ++T + + +P D Q+CT KFG
Sbjct: 179 MWLAPTILTTSCKINVKYFPFDQQSCTLKFG 209
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 56.4 bits (130), Expect = 3e-08
Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Frame = +2
Query: 140 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 304
++ LL Y +++ P + + + L + LR ++ E + + I ++ W D L
Sbjct: 35 LLKYLLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLK 94
Query: 305 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAAXTAGDYALRARVSNN------GSVSWIKR 463
WN ++G + ++ +R+W+PDV+L N A+ +L ++ N GS +W+
Sbjct: 95 WNPDDFGGIKSINIAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTNVIVNHDGSTTWLAP 154
Query: 464 LDISTPISMQLDXWPNDMQTCTXKFG 541
I + + + +P D+Q+C FG
Sbjct: 155 AIIKSECKIDVRFFPFDVQSCELTFG 180
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +2
Query: 140 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 304
+++ L Y +++ P D + + L + LR ++ E E + ++ W D L
Sbjct: 453 LLNYLFQNYSKDARPVLNVDDPVQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHFLQ 512
Query: 305 WNAGEW-GCSTWLVSSERLWRPDVVLLN 385
WN ++ G + +++ +++W+PDV+L N
Sbjct: 513 WNPDDFSGIKSIIIAPDKVWKPDVLLFN 540
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 54.0 bits (124), Expect = 2e-07
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Frame = +2
Query: 224 HANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA-AX 397
H + + TV L W D L+WN ++G + V +W PD+VL N +
Sbjct: 199 HQQLMGAPVTVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYNNVDSD 258
Query: 398 TAGD---YALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKFG 541
++G+ + + + ++G+V W+ + + + + + +P D Q C +FG
Sbjct: 259 SSGEMYKFTTKVNIHSDGTVQWLSPIQVKSECKIDITNFPLDEQFCKLEFG 309
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 52.4 bits (120), Expect = 5e-07
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Frame = +2
Query: 251 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLNAAAXTAGDYALR- 421
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN A ++ +
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNE 91
Query: 422 ---ARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKF 538
V +NG V W+ + + + M + +P D Q C KF
Sbjct: 92 GNPVLVESNGVVRWLAPVVLKSRCKMDVRSYPFDEQYCGLKF 133
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 52.0 bits (119), Expect = 7e-07
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Frame = +2
Query: 215 HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 391
HLR + V + ++ W + L+WN ++G + ++ ++W PD++L N A
Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYNNA 165
Query: 392 AXT-AGD---YALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKFG 541
T AG Y S++G+ W ++ ++ + +P D Q C+ KFG
Sbjct: 166 DETYAGGLEKYKTSVIASSDGTQEWNSPASFTSTCNINVRYFPFDSQNCSLKFG 219
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 51.2 bits (117), Expect = 1e-06
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAAXTAGDYALRARV------ 430
+++ W D L+WN ++G + V +W+PD++L N A+ +L ++
Sbjct: 26 IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVIL 85
Query: 431 SNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKFG 541
S++GS +W+ I T + + +P D+Q C KFG
Sbjct: 86 SSDGSAAWLSPAIIKTECKVDVRLFPFDVQYCDLKFG 122
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 49.2 bits (112), Expect = 5e-06
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN--AAAXTAGDYAL--RARVSN 436
+ + W++ L+W+ +G T + V+ +W+PD+VL + T Y RA + +
Sbjct: 64 INLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVLYHNIGFGETGAIYKFDTRATIMH 123
Query: 437 NGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKFG 541
NG W +I + ++ + +P D Q C KFG
Sbjct: 124 NGYTEWFAPTEIHSICAIDITYFPFDEQFCKMKFG 158
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 48.4 bits (110), Expect = 8e-06
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Frame = +2
Query: 254 VRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA--AXTAGD--YAL 418
+ I+ + + W ++ L+W+ + G T + ++ +W PD+VL ++A + G Y
Sbjct: 39 MEIVQIVNVRWDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKT 98
Query: 419 RARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKFG 541
+S +GS +W + + + +P D QTC KFG
Sbjct: 99 HVIISKDGSSAWFSPASFRSTCKIDVTYFPFDEQTCYMKFG 139
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 48.0 bits (109), Expect = 1e-05
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 13/108 (12%)
Frame = +2
Query: 257 RILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAAXT----------- 400
+++ + + W + LSWNA E+ G S VS +R W PD++L N+
Sbjct: 16 KLIRIIAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNSVRFVDSAEEDDRLGG 75
Query: 401 -AGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKFG 541
Y + + +NG SW+ + + +P D Q CT +FG
Sbjct: 76 GTEKYKTQIEIRSNGYNSWLSPAMFKSTCDVNTRYFPFDDQHCTLEFG 123
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Frame = +2
Query: 284 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-AXTAG---DYALRARVSNNGSV 448
W + L WN +G + VS ++W PD+VL N A A T G ++ R VS++G
Sbjct: 40 WYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKN 99
Query: 449 SWIKRLDISTPISMQLDXWPNDMQTCTXKFG 541
W+ + S+ ++++ +P D Q C+ KFG
Sbjct: 100 MWLAPVIFSSSCTIKIKYFPFDDQYCSLKFG 130
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 46.4 bits (105), Expect = 3e-05
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Frame = +2
Query: 284 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAA---AXTAGDYAL---RARVSNNGS 445
W D L W+ ++ S + +W PDV L+N AG L V +G
Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLINNGDKLVHVAGGAELFNADTVVRQSGK 463
Query: 446 VSWIKRLDISTPISMQLDXWPNDMQTCTXKF 538
V WI + ++ ++++ WP D Q CT F
Sbjct: 464 VDWIAQASFTSTCNLRVRFWPMDDQFCTLTF 494
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 46.0 bits (104), Expect = 4e-05
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA--AXTAGDYALRARVSNN- 439
+ + W + ++WN E+G + + LW+PD+ L N A Y A++ N
Sbjct: 44 MDVKWENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYNNADSGYDGSLYGFTAKIKVNY 103
Query: 440 -GSVSWIKRLDISTPISMQLDXWPNDMQTCTXKFG 541
G+ +W+ +T + + +P D Q C KFG
Sbjct: 104 SGTNTWLAPKIFTTSCKINVKYFPFDQQECRLKFG 138
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 44.8 bits (101), Expect = 1e-04
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-AXTAGD---YALRARVSN 436
+ + W + L+W+ +G T + V R+WRPD++L N A T G + + ++
Sbjct: 75 IDLKWNNPLLTWDPTHFGNLTSINVDPLRVWRPDLILYNNADRDTDGALDRFYTKVQLKF 134
Query: 437 NGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKFG 541
+GS W+ + + + +P D Q+C KFG
Sbjct: 135 DGSSLWLAPIIFKSTCKFDVAYFPFDEQSCILKFG 169
>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
Length = 240
Score = 44.8 bits (101), Expect = 1e-04
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 7/96 (7%)
Frame = +2
Query: 275 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAXT---AGDYAL---RARVS 433
+ W + L W+ ++ + + +W PD+ LLN T AG ++ V
Sbjct: 123 ERTWRNPYLKWDKAKYQNRDRVHFDPKEIWVPDISLLNNGDNTVKMAGGRSIFLTNVVVE 182
Query: 434 NNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKFG 541
N G W + + SM L WP D QTC KFG
Sbjct: 183 NTGKCVWSGPVTFTFTCSMALSRWPFDQQTCAMKFG 218
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 44.8 bits (101), Expect = 1e-04
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAXTAGDYAL----RARVSN 436
L+M W D L WN ++G T + + + +W P V++ N A R V +
Sbjct: 547 LRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYNQAGDLGESITSSNTPRPVVRS 606
Query: 437 NGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKFG 541
+G+V W+ I + + + +P D Q C FG
Sbjct: 607 DGTVLWMVPTVIKSSCVIDVKYFPFDQQLCKIIFG 641
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +2
Query: 152 LLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 316
L TY+++ P D + V L L L ++ + T+ ++ ++ W D RL WN
Sbjct: 20 LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79
Query: 317 EW-GCSTWLVSSERLWRPDVVLLNAA 391
+ G ++ + RLW PD+ L N A
Sbjct: 80 AYDGVDNIVIKASRLWLPDITLYNNA 105
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
Frame = +2
Query: 275 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA--AXTAGDYALRARVS--NN 439
+ W D L W+ + G T + V LW+PD+VL N Y +V +
Sbjct: 88 RQTWTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYNNVNDEDRGEQYLFNTKVIIYST 147
Query: 440 GSVSWIKRLDISTPISMQLDXWPNDMQTCTXKFG 541
G + W + T + + +P D QTC FG
Sbjct: 148 GDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFG 181
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 278 MNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 391
+ W++ LSWNA E+G +T V +RLW PD+VL N A
Sbjct: 77 VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYNNA 115
>SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06)
Length = 147
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
Frame = +2
Query: 284 WIDKRLSWNA-GEWGCSTWLVSSERLWRPDVVLLNAAAXT---AGD---YALRARVSNNG 442
W D L W ++ + S + +W PDV L+N A + AG + V G
Sbjct: 2 WNDVFLKWRGEAKYQVTKTRFSPQEIWVPDVALINNADKSVRLAGGPELFKTDLNVWQGG 61
Query: 443 SVSWIKRLDISTPISMQLDXWPNDMQTCTXKF 538
V W+ ++ +++ WP D Q CT F
Sbjct: 62 KVEWVAPASFTSDCKLRVRYWPIDDQFCTLTF 93
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 39.1 bits (87), Expect = 0.005
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAAXT---AGDYALRARVSNN 439
+ + W D RL WN ++G +++ S +LW PD+ L N A + V+++
Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYNNANDNYEKEKEEYYGLTVNSD 335
Query: 440 GSVSWIKRLDISTPISMQLDXWPNDMQ 520
GS+ W + ++ + +P D Q
Sbjct: 336 GSIGWYYPTIFKSSCTIDVTYFPFDDQ 362
>SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22)
Length = 636
Score = 38.3 bits (85), Expect = 0.009
Identities = 28/92 (30%), Positives = 37/92 (40%), Gaps = 6/92 (6%)
Frame = +2
Query: 284 WIDKRLSWNAGEWGCSTWLVSS--ERLWRPDVVLLNAAAXTA----GDYALRARVSNNGS 445
W DKRL AG+ S L S W+PD NA D R + +G
Sbjct: 273 WTDKRL---AGKLNLSITLTGSAASNAWKPDPYCYNARQSNMMLEDKDVNSRLSIDPDGK 329
Query: 446 VSWIKRLDISTPISMQLDXWPNDMQTCTXKFG 541
+ + + + I M L +P D Q C KFG
Sbjct: 330 IFYSRGVSIVASCEMDLHDFPLDTQNCYLKFG 361
>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 37.9 bits (84), Expect = 0.012
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Frame = +2
Query: 170 RESPPDS---KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTW 337
R S PD ++VV+L + + +++ ++ I L+ W D L +N +++
Sbjct: 68 RPSTPDGGPLQVVVDLVI-ISMSSLDDNNMEYTISFYLRQTWHDPLLRYNKSSLVNAASY 126
Query: 338 LVSS----ERLWRPDVVLLNAAAXTAG--DYAL---RARVSNNGSVSWIKRLDISTPISM 490
+ +++W+PD L N AG D +L RV NG+V++ R+ + M
Sbjct: 127 ATLNYALVDKIWKPDTYLENVKKIDAGSDDKSLVHKGFRVYPNGNVTFSTRISATLSCKM 186
Query: 491 QLDXWPNDMQTC 526
+ +P D Q+C
Sbjct: 187 EFRNFPMDRQSC 198
>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
Length = 79
Score = 37.9 bits (84), Expect = 0.012
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 251 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 385
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 37.5 bits (83), Expect = 0.015
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +2
Query: 116 ENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQM 280
++ L L+ D Y++ P D + V + + + + + ++L ++M
Sbjct: 27 QDDNELRLIKDLFFRGYNKNVRPVEDKSMPVEVKFGIAYTQVVDLIEKDQVLISNIWVRM 86
Query: 281 NWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 385
NW + L WNA E+G L +S +W PD+VL N
Sbjct: 87 NWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122
>SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022)
Length = 91
Score = 36.7 bits (81), Expect = 0.027
Identities = 15/63 (23%), Positives = 30/63 (47%)
Frame = +2
Query: 350 ERLWRPDVVLLNAAAXTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCT 529
+++W+PD + N + T + + G V + +R+ + M L +P D Q+C+
Sbjct: 26 KQIWKPDTYINNEKSSTVPENQFLLTIDPEGRVVYSQRMTVVASCMMYLRNYPMDTQSCS 85
Query: 530 XKF 538
F
Sbjct: 86 ISF 88
>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 36.7 bits (81), Expect = 0.027
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Frame = +2
Query: 284 WIDKRLSWNAGEWGCSTWLVSSE--RLWRPDVVLLNA--AAXTAGDYALRARVS--NNGS 445
W D+RL A S L E ++WRPD NA ++ TA D + + ++ NG
Sbjct: 12 WKDERL---ANRLNKSVVLKGDEITKMWRPDPFCYNARESSLTASDDDINSMMTIHPNGD 68
Query: 446 VSWIKRLDISTPISMQLDXWPNDMQTCTXKFG 541
V + + I+ M+L +P D Q C K G
Sbjct: 69 VVYSRMTIITAECEMKLHDFPMDEQQCHLKLG 100
>SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 480
Score = 34.3 bits (75), Expect = 0.14
Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 4/134 (2%)
Frame = +2
Query: 140 MIDSLLATYDRESPP---DSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSW 307
++ +L YD+ S P + VN+++ ++ + I+ES + L+ W D RL+
Sbjct: 76 VLKRMLRKYDKYSRPYVGRRAVQVNISMAVQSFSQIKESNMEFEVFMYLRQEWNDPRLAH 135
Query: 308 NAGEWGCSTWLVSSERLWRPDVVLLNAAAXTAGDYALRARVSNNGSVSWIKRLDISTPIS 487
S +W PD NA + + NG + + R +
Sbjct: 136 GYRAL-LSLAKDRVNDIWLPDTYFNNANEYEVYIVNQLSLIKPNGDIYYSGRNKVKGACQ 194
Query: 488 MQLDXWPNDMQTCT 529
M L +P D+Q C+
Sbjct: 195 MDLFNFPLDVQRCS 208
>SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 319
Score = 33.1 bits (72), Expect = 0.33
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 428 VSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKFG 541
V+N G V W + S+++ WP D+Q C+ FG
Sbjct: 21 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFG 58
>SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07)
Length = 134
Score = 33.1 bits (72), Expect = 0.33
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 410 YALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKFG 541
+ + +VS+ G W+ ++T + + +P D Q+CT KFG
Sbjct: 13 FKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLKFG 56
>SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 400
Score = 33.1 bits (72), Expect = 0.33
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 428 VSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKFG 541
V+N G V W + S+++ WP D+Q C+ FG
Sbjct: 102 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFG 139
>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
Length = 191
Score = 31.9 bits (69), Expect = 0.77
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 191 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 367
K +V LH + A + S S VR+ +++ W + L WN ++G T V+ +W P
Sbjct: 69 KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126
Query: 368 DVVLLN 385
D+VL N
Sbjct: 127 DIVLYN 132
>SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)
Length = 88
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +2
Query: 140 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 313
+++ LL YDR P + V +TL L T+ + D+ W + L+WN
Sbjct: 15 LLEKLLTGYDRNERPVLNDNESVTVTLGL----------TLNQIVDVI--WYNPLLTWNV 62
Query: 314 GEWG-CSTWLVSSERLWRPDVVL 379
E+G T VS +W PD+VL
Sbjct: 63 TEYGGLKTINVSPTIIWLPDIVL 85
>SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11)
Length = 269
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 419 RARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKFG 541
+A V +NG W +I + + + +P D Q C KFG
Sbjct: 21 KATVKHNGYTEWFAPTEIHSICKIDITFFPFDEQFCKLKFG 61
>SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 30.3 bits (65), Expect = 2.4
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 9/146 (6%)
Frame = +2
Query: 116 ENATSLSLMIDSLLATYDRESPP---DSKIVVNLTLHLRH-ANIRESESTVRILADLQMN 283
E A + + +D L ++ D+ P +VV + +++ + I + +++ +
Sbjct: 42 EYAKNTTKTLDRLKSSMDKRLRPFFGGKPVVVYVDIYIVNIGEISVTNMDYKLMLYYRQT 101
Query: 284 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAXT-----AGDYALRARVSNNGSV 448
W D RL+++ E + +W PD + N + T +Y L + NG+
Sbjct: 102 WHDPRLAFDLPE-AITVQGGMLNDIWIPDTLFTNEKSSTFHKVTQDNYLLS--IWPNGTT 158
Query: 449 SWIKRLDISTPISMQLDXWPNDMQTC 526
R+ ++ M L +P D QTC
Sbjct: 159 YLSMRISLTGICPMDLRKYPMDTQTC 184
>SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 30.3 bits (65), Expect = 2.4
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 8/123 (6%)
Frame = +2
Query: 164 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEWGC 328
YD+ P D+ V L + + N I E V + ++ NW D RL+ N +
Sbjct: 14 YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72
Query: 329 STWLVSSERLWRPDVVLLNAAAXTAGD---YALRARVSNNGSVSWIKRLDISTPISMQLD 499
+ E++WRPD NA A + D + + + + GS + + S L+
Sbjct: 73 TFTRGDIEKVWRPDTYCSNAHAYSDVDVLYHWVSQKEFSVGSRDMAQFYVLGAQPSTNLE 132
Query: 500 XWP 508
WP
Sbjct: 133 FWP 135
>SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043)
Length = 137
Score = 30.3 bits (65), Expect = 2.4
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 8/123 (6%)
Frame = +2
Query: 164 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEWGC 328
YD+ P D+ V L + + N I E V + ++ NW D RL+ N +
Sbjct: 14 YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72
Query: 329 STWLVSSERLWRPDVVLLNAAAXTAGD---YALRARVSNNGSVSWIKRLDISTPISMQLD 499
+ E++WRPD NA A + D + + + + GS + + S L+
Sbjct: 73 TFTRGDIEKVWRPDTYCSNAHAYSDVDVLYHWVSQKEFSVGSRDMAQFYVLGAQPSTNLE 132
Query: 500 XWP 508
WP
Sbjct: 133 FWP 135
>SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)
Length = 156
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 284 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 385
W ++ L+W+ E+G ST V+ +++W PD+ L N
Sbjct: 2 WRNEYLTWDPKEFGGISTINVNVDKVWVPDIYLYN 36
>SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +2
Query: 383 NAAAXTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKFG 541
N A T + + ++ N+G W I + ++ + +P D Q C KFG
Sbjct: 5 NVPAGTLYQFKTKVQLFNDGLCVWYAPTIIQSGCNIDITYFPFDDQLCELKFG 57
>SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)
Length = 296
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Frame = +2
Query: 350 ERLWRPDVVLLNAAAXTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 520
+ +W P NA D + NG V + RL I+ + L +P+D+Q
Sbjct: 32 DEIWIPSTYFFNAKKAYFHDVTTENYLLMIKPNGDVFYSVRLTITMACKLTLQMFPHDVQ 91
Query: 521 TC 526
C
Sbjct: 92 VC 93
>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
Length = 360
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 332 TWLVSSERLWRPDVVLLNAAAXTAGDYAL-RARVSNNG 442
TWL+ +WRPD+VL +A D L R ++++NG
Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNG 306
>SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 29.1 bits (62), Expect = 5.4
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +2
Query: 356 LWRPDVVLLNA--AAXTAGDYALRARVS--NNGSVSWIKRLDISTPISMQLDXWPNDMQT 523
LW PD NA + + D + + ++ +GS+ + + I M L +P D QT
Sbjct: 17 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 76
Query: 524 CTXKFG 541
C FG
Sbjct: 77 CNLVFG 82
>SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1706
Score = 29.1 bits (62), Expect = 5.4
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -1
Query: 469 VQALYPGDGAVIRYTGAESVVPGGXCSRV*QYHVRP-PQAFRGHQPSAAAP-FPCVPTQS 296
VQ + DG + Y S VP G S + V+P QA G +P A P P T +
Sbjct: 1172 VQQVSASDGLCVTYAVGPSAVPAGIPSTLLLTGVKPVQQASSGVRPVAVTPRIPVTLTPN 1231
Query: 295 FVDP 284
+ P
Sbjct: 1232 AIRP 1235
>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
Length = 428
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAG-EWGCSTWLVSSERLWRPDVVLLN 385
+ W D L WN G V +W PD+ L+N
Sbjct: 28 IYQEWKDPNLKWNKSIAQGVEEIFVDPSDIWTPDIALMN 66
>SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 29.1 bits (62), Expect = 5.4
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +2
Query: 356 LWRPDVVLLNA--AAXTAGDYALRARVS--NNGSVSWIKRLDISTPISMQLDXWPNDMQT 523
LW PD NA + + D + + ++ +GS+ + + I M L +P D QT
Sbjct: 144 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 203
Query: 524 CTXKFG 541
C FG
Sbjct: 204 CNLVFG 209
>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 29.1 bits (62), Expect = 5.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 241 LTNVSMSQMQGQVDYDFGVGGRLPIVRCEERVDHE 137
L+++S +G VD FGV + +R +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 28.3 bits (60), Expect = 9.5
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 263 LADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 385
+ DLQ W + L+W+ ++G + V+ E +W PD+V+ N
Sbjct: 1467 IVDLQ--WENPILTWDPRDYGGVQEINVAPEEVWVPDIVIYN 1506
>SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10)
Length = 517
Score = 28.3 bits (60), Expect = 9.5
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +2
Query: 356 LWRPDVVLLNAAAXTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 526
+W PD V ++A+ + + + V+ G V W R + M L +P D QTC
Sbjct: 38 VWVPDTVFVDASHAYMHNVMVANHKLDVTPGGRVFWGTRATLIARCHMNLRRYPMDEQTC 97
>SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06)
Length = 229
Score = 28.3 bits (60), Expect = 9.5
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRESPPD-SKIVVNLTLHLRHANIRE-SESTVRILAD--LQMNW 286
NA +LS+ I+ LA+YDR+ P+ + V + + + + E E+ + D L+ W
Sbjct: 15 NAHNLSVFINDALASYDRKVRPNYGGLPVMVLIEFKVISFGEIQEANMEYSFDIFLRQWW 74
Query: 287 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 385
D R N E + ++ W PD N
Sbjct: 75 YDPRFKSNFTE-PFTMAADPTKMFWTPDTYFWN 106
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,480,523
Number of Sequences: 59808
Number of extensions: 385885
Number of successful extensions: 1085
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2740956230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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