Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_F16
(862 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 32 0.51
07_01_0479 + 3606663-3607448 31 0.89
07_03_1747 + 29188568-29188715,29188793-29189541 31 1.6
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 30 2.1
08_02_1291 + 25930056-25930067,25930289-25930334,25930434-259305... 29 3.6
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 3.6
03_05_0630 + 26260159-26260272,26260520-26260894 29 3.6
02_04_0400 - 22608519-22608844,22609044-22609122 29 4.8
01_06_1682 - 39130696-39131705,39132355-39132583 29 4.8
12_02_1174 - 26696869-26698191 29 6.3
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 6.3
07_03_1751 - 29215074-29216270 29 6.3
09_02_0543 + 10427321-10428315,10428440-10429154 28 8.3
08_01_0059 - 394001-394708 28 8.3
07_03_0809 - 21669632-21669637,21669871-21670131,21670573-216707... 28 8.3
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 28 8.3
07_03_0558 + 19461369-19462448 28 8.3
06_01_0178 + 1386981-1387505 28 8.3
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 28 8.3
03_01_0515 - 3864796-3865425 28 8.3
02_05_0686 - 30900748-30902167,30903442-30904742 28 8.3
02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771,198... 28 8.3
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 28 8.3
>05_03_0366 -
13102147-13102281,13102560-13102739,13102791-13102992,
13104385-13104575
Length = 235
Score = 32.3 bits (70), Expect = 0.51
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -1
Query: 343 HQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQM-QGQVDYDFGVGG 179
H P AAA P VP++ P L + GG GL S S + G + D G+GG
Sbjct: 7 HSPRAAAAAPSVPSR-LPRPFLLSLSSPSRGGSGLVAASASAVAAGGSEGDGGIGG 61
>07_01_0479 + 3606663-3607448
Length = 261
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
PP PG P P PPP PP PP P
Sbjct: 217 PPQVRPGMPGGPPPGMRPGMPPPPFRPGMPPPPPGPQQP 255
>07_03_1747 + 29188568-29188715,29188793-29189541
Length = 298
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +3
Query: 396 PPPGTTLSAPVYLITAPSPG*SAWTLALQFLCS*TIGPTTCRLARSSSVLG 548
PPP TT++ V L TA + S + QF+C+ TTC + S S+ G
Sbjct: 213 PPPTTTMAQHVVLPTAAA---SCHQMQDQFVCARAAETTTCCWSESESLPG 260
>11_06_0411 -
23230580-23230795,23231407-23231862,23232142-23232195,
23232251-23232367
Length = 280
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 241 VRVHRADTGRSSNELDRQTTELERRGMGLQHLAGVLGTL 357
V+ H + R S EL+RQ ELER+G L+ G L +
Sbjct: 89 VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127
>08_02_1291 +
25930056-25930067,25930289-25930334,25930434-25930546,
25930645-25930930,25931357-25931421,25931642-25931693,
25931774-25931883,25932611-25932641,25932853-25933004,
25934622-25934840
Length = 361
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 256 HGGLGLTNVSMSQMQGQVDYDFGVGGRLPI 167
+GG L ++Q G Y +G GGRLP+
Sbjct: 100 YGGPALPRYGIAQFPGGSGYPYGYGGRLPM 129
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPP 824
PP H P P PPP PP PP
Sbjct: 63 PPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPP 96
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/53 (26%), Positives = 17/53 (32%)
Frame = +3
Query: 699 PMFFXXNXPPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXPXXXSXL 857
P + PP G P P PP + PP PP P + L
Sbjct: 86 PQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPPREAQL 138
>03_05_0630 + 26260159-26260272,26260520-26260894
Length = 162
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -1
Query: 838 GXXXXGGXGGXXXAXGGGXXXGAXXGETXXRXPGXXAGGXFXXKNXGXXAXXG 680
G GG GG GGG G G R G GG + G G
Sbjct: 93 GGGYGGGGGGYGGGRGGGGYGGGGGGGYGRREGGYGGGGGYGGGRGGGGGGYG 145
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = -1
Query: 838 GXXXXGGXGGXXXAXGGGXXXGAXXGETXXRXPGXXAGGXFXXKNXGXXAXXGXHXXPP 662
G GG GG GGG G G G GG + N G H P
Sbjct: 54 GGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGYYPPWNGGYYPPGPGHHHNP 112
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = -1
Query: 838 GXXXXGGXGGXXXAXGGGXXXGAXXGETXXRXPGXXAGGXFXXKNXGXXAXXGXHXXPP 662
G GG GG GGG G G G GG G G PP
Sbjct: 38 GGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGYYPP 96
>01_06_1682 - 39130696-39131705,39132355-39132583
Length = 412
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Frame = +3
Query: 699 PMFFXXNXPPA--HXPGXRXXVSPXXAPXXXPPPXAXXXPPXPP 824
P ++ + PP H P VSP A PPP PP PP
Sbjct: 278 PPYYFNSPPPQYQHSPPANSYVSPPLAHQYPPPP--YKSPPIPP 319
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 3/46 (6%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXX---PPPXAXXXPPXPPXXXXPXXXS 851
PP P R V P P PPP PP PP P S
Sbjct: 124 PPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPS 169
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
PP P +SP P PPP PP P P
Sbjct: 1164 PPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLP 1202
>07_03_1751 - 29215074-29216270
Length = 398
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 838 GXXXXGGXGGXXXAXGGGXXXGAXXGETXXRXPGXXAGG 722
G GG GG GGG GA G G AGG
Sbjct: 127 GGLGGGGGGGAGGGLGGGAGGGAGAGVGGGAGAGGGAGG 165
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPP 824
PP P + P PPP A PP PP
Sbjct: 15 PPRPTPAPQATPPPAIPESGPPPPPAPDMPPPPP 48
>08_01_0059 - 394001-394708
Length = 235
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
PPA P P +P PPP P PP P
Sbjct: 13 PPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHP 51
>07_03_0809 -
21669632-21669637,21669871-21670131,21670573-21670752,
21671458-21672819
Length = 602
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 128 SLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMN 283
+L +D L+ YD+ PPDS+ V HA + +R+L + +N
Sbjct: 160 NLWTQVDILILRYDK--PPDSRFVQEALAAHAHATEGSETTAIRLLEVISLN 209
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +3
Query: 723 PPA-HXPGXRXXVSPXXAPXXXPPPXAXXXPPXPP 824
PPA P SP P PPP PP PP
Sbjct: 569 PPAPQAPMPPLKASPVPPPEPSPPPAPKAAPPPPP 603
>07_03_0558 + 19461369-19462448
Length = 359
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = -1
Query: 838 GXXXXGGXGGXXXAXGGGXXXGAXXGETXXRXPGXXAGGXFXXKNXGXXAXXGXH 674
G GG GG G G G G G GG F G G H
Sbjct: 97 GGGGFGGGGGGGLGGGQGGGFGGGAGAGGGAGGGLGGGGGFGGGGGGGLGGGGGH 151
>06_01_0178 + 1386981-1387505
Length = 174
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/55 (29%), Positives = 17/55 (30%)
Frame = -1
Query: 838 GXXXXGGXGGXXXAXGGGXXXGAXXGETXXRXPGXXAGGXFXXKNXGXXAXXGXH 674
G GG GG GGG G G+ G GG G G H
Sbjct: 34 GASGGGGGGGGGGGGGGGGGAGGKGGKGGAGGHGGAGGGGGGGGGKGRKGGAGGH 88
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 756 VSPXXAPXXXPPPXAXXXPPXPP 824
V P AP PPP PP PP
Sbjct: 343 VQPSNAPPPPPPPPPPPPPPPPP 365
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 726 PAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
P P SP P PPP PP PP P
Sbjct: 71 PPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPP 108
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
PP P SP P PPP P PP P
Sbjct: 86 PPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPPPAWSP 124
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPP 824
PP P P P PPP PP PP
Sbjct: 336 PPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPP 369
>02_01_0296 +
1978565-1981197,1981216-1981639,1982280-1982771,
1982950-1983087
Length = 1228
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 425 GRGERSPRRWLQPRLAVPRQASTSVPRTP 339
GRG RS R L+P LA+ A + +P P
Sbjct: 442 GRGPRSTLRILRPGLAISEMARSMLPAEP 470
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -1
Query: 370 VRPPQAFRGHQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQMQGQV 203
++PP H + AP P +P+ S P++ + PH S +QM Q+
Sbjct: 551 LQPPAHMLPHAQGSRAPLPQLPSMSGPPPVNPPLPPMPHPMAMQVQGSSNQMMPQM 606
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,933,429
Number of Sequences: 37544
Number of extensions: 503247
Number of successful extensions: 2563
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2365
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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