Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_F16
(862 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 36 0.046
At5g05130.1 68418.m00544 SNF2 domain-containing protein / helica... 32 0.56
At4g15200.1 68417.m02329 formin homology 2 domain-containing pro... 32 0.56
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 31 0.75
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 31 0.75
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 31 1.3
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 30 1.7
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 30 2.3
At5g46730.1 68418.m05757 glycine-rich protein 29 4.0
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 29 4.0
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 29 4.0
At3g55220.1 68416.m06133 splicing factor, putative contains CPSF... 28 7.0
At3g55200.1 68416.m06131 splicing factor, putative contains CPSF... 28 7.0
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 28 7.0
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 28 7.0
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 28 7.0
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 28 9.2
At2g43150.1 68415.m05358 proline-rich extensin-like family prote... 28 9.2
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 35.5 bits (78), Expect = 0.046
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
PP H P P AP PPP PP PP P
Sbjct: 584 PPVHSPPPPVHSPPPPAPVHSPPPPVHSPPPPPPVYSPP 622
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 759 SPXXAPXXXPPPXAXXXPPXPPXXXXP 839
SP AP PPP PP PP P
Sbjct: 517 SPPPAPVNSPPPPVYSPPPPPPPVHSP 543
>At5g05130.1 68418.m00544 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 862
Score = 31.9 bits (69), Expect = 0.56
Identities = 15/69 (21%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = -2
Query: 222 LKCRVRLTTILESGGDSRSYVARSESIM-RDSDVAFSHSAALAIAQVRRNGNKNNISRRH 46
+ C++ + LE+ +S ++R ++ +SD +F S A+ + + NG+K ++ +
Sbjct: 126 IPCQIHVFAKLEASSTVKSTISRGGLVLISESDTSFGLSEAVVVKEQMGNGDKRSVDKIF 185
Query: 45 FMTTDLLKL 19
+ + +KL
Sbjct: 186 KLVDENVKL 194
>At4g15200.1 68417.m02329 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 600
Score = 31.9 bits (69), Expect = 0.56
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
PPA P + P P PPP PP PP P
Sbjct: 268 PPAAAPPPQPPPPPPPKPQPPPPPKIARPPPAPPKGAAP 306
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 31.5 bits (68), Expect = 0.75
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
PP P V P P PPP PP PP P
Sbjct: 84 PPTVKPPPPPYVKPPPPPTVKPPPPPYVKPPPPPTVKPP 122
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
PP P V P P PPP PP PP P
Sbjct: 92 PPYVKPPPPPTVKPPPPPYVKPPPPPTVKPPPPPTPYTP 130
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
PP + P V P P PPP PP PP P
Sbjct: 77 PPPYTPKP-PTVKPPPPPYVKPPPPPTVKPPPPPYVKPP 114
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +3
Query: 699 PMFFXXNXPPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
P + PP P V P P PPP P PP P
Sbjct: 92 PPYVKPPPPPTVKPPPPPYVKPPPPPTVKPPPPPTPYTPPPPTPYTP 138
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 31.5 bits (68), Expect = 0.75
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
PP P SP P PPP PP PP P
Sbjct: 438 PPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPP 476
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/47 (29%), Positives = 17/47 (36%)
Frame = +3
Query: 699 PMFFXXNXPPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
P++ PP P P +P PPP PP PP P
Sbjct: 462 PVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPP 508
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/47 (29%), Positives = 16/47 (34%)
Frame = +3
Query: 699 PMFFXXNXPPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
P++ PP P P P PPP PP PP P
Sbjct: 447 PVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPP 493
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +3
Query: 699 PMFFXXNXPPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXPXXXS 851
P + PP P SP PPP PP PP P S
Sbjct: 461 PPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYS 511
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXPXXXS 851
PP+ P SP P PPP PP P P S
Sbjct: 484 PPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPS 526
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXPXXXS 851
PP P P P PPP PP PP P S
Sbjct: 439 PPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYS 481
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
PP H P P +P PPP PP P P
Sbjct: 790 PPVHSPPPPVHSPPPPSPIYSPPPPVFSPPPKPVTPLPP 828
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
PP H P P PPP PP PP P
Sbjct: 722 PPVHSPPPPVQSPPPPPVFSPPPPAPIYSPPPPPVHSPP 760
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +3
Query: 681 PXXAXFPMFFXXNXPPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
P + P + PP H P P P PPP PP PP P
Sbjct: 576 PVHSPPPPVYSPPPPPVHSPPPPVHSPPP--PVHSPPPPVYSPPPPPPVHSPP 626
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
PP H P P +P PPP PP PP P
Sbjct: 496 PPVHSP-------PPPSPIHSPPPPPVYSPPPPPPVYSP 527
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
PP H P P P PPP PP PP P
Sbjct: 634 PPVHSPPPPVYSPPP--PVYSPPPPPVKSPPPPPVYSPP 670
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +3
Query: 705 FFXXNXPPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
F N PPA PG SP P PP A PP PP P
Sbjct: 366 FTTANAPPA-PPGPANQTSPPPPP----PPSAAAPPPPPPPKKGP 405
>At5g46730.1 68418.m05757 glycine-rich protein
Length = 290
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 838 GXXXXGGXGGXXXAXGGGXXXGAXXGETXXRXPGXXAGG 722
G GG GG GGG GA G G AGG
Sbjct: 161 GGGAYGGGGGHGGGGGGGSAGGAHGGSGYGGGEGGGAGG 199
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
PP P P P PPP PP PP P
Sbjct: 384 PPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPP 422
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXPXXXS 851
PP H P SP PPP PP P P S
Sbjct: 589 PPVHSPPPPPVFSPPPPVFSPPPPSPVYSPPPPSHSPPPPVYS 631
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPX-AXXXPPXPP 824
PP H P SP PPP A PP PP
Sbjct: 554 PPVHSPPPPVYSSPPPPHVYSPPPPVASPPPPSPP 588
>At3g55220.1 68416.m06133 splicing factor, putative contains CPSF A
subunit region (PF03178); contains weak WD-40 repeat
(PF00400); similar to Splicing factor 3B subunit 3
(SF3b130)/spliceosomal protein/Splicing factor 3B
subunit 3 (SAP 130)(KIAA0017)(SP:Q15393) Homo sapiens,
EMBL:HSAJ1443_1
Length = 1214
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 425 GRGERSPRRWLQPRLAVPRQASTSVPRTPA 336
GRG RS R L+P LA+ A + +P P+
Sbjct: 426 GRGPRSSLRILRPGLAITEMAVSQLPGQPS 455
>At3g55200.1 68416.m06131 splicing factor, putative contains CPSF A
subunit region (PF03178); contains weak WD-40 repeat
(PF00400); similar to Splicing factor 3B subunit 3
(SF3b130)/spliceosomal protein/Splicing factor 3B
subunit 3 (SAP 130)(KIAA0017)(SP:Q15393) Homo sapiens,
EMBL:HSAJ1443_1
Length = 1214
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 425 GRGERSPRRWLQPRLAVPRQASTSVPRTPA 336
GRG RS R L+P LA+ A + +P P+
Sbjct: 426 GRGPRSSLRILRPGLAITEMAVSQLPGQPS 455
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPP--XPPXXXXP 839
PPA+ P P P PPP A PP PP P
Sbjct: 66 PPANPPPPVSSPPPASPPPATPPPVASPPPPVASPPPATPP 106
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPP--XPPXXXXP 839
PPA+ P P P PPP A PP PP P
Sbjct: 66 PPANPPPPVSSPPPASPPPATPPPVASPPPPVASPPPATPP 106
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
PPA P P P PPP PP P P
Sbjct: 43 PPAPSPSPCPSPPPKPQPKPVPPPACPPTPPKPQPKPAP 81
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +3
Query: 723 PPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
PPA P + P P PPP PP PP P
Sbjct: 85 PPALPP--KPLPPPLSPPQTTPPPPPAITPPPPPAITPP 121
>At2g43150.1 68415.m05358 proline-rich extensin-like family protein
similar to CRANTZ hydroxyproline-rich glycoprotein
[Manihot esculenta] gi|7211797|gb|AAF40442; similar to
extensin gi|1165322|gb|AAB53156; contains proline-rich
extensin domains, INTERPRO:IPR002965
Length = 212
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/47 (27%), Positives = 15/47 (31%)
Frame = +3
Query: 699 PMFFXXNXPPAHXPGXRXXVSPXXAPXXXPPPXAXXXPPXPPXXXXP 839
P ++ PP P S P PPP P PP P
Sbjct: 71 PYYYHSPPPPVKSPPPPYVYSSPPPPVKSPPPPYYYHSPPPPVKSPP 117
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,109,444
Number of Sequences: 28952
Number of extensions: 341013
Number of successful extensions: 1827
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1629
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2009406400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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