Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_F14
(864 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp... 55 7e-08
At4g34060.1 68417.m04833 expressed protein similar to DEMETER pr... 33 0.32
At2g29640.1 68415.m03601 josephin family protein contains Pfam d... 31 0.99
At4g11280.1 68417.m01824 1-aminocyclopropane-1-carboxylate synth... 30 1.7
At3g16290.1 68416.m02056 FtsH protease, putative contains simila... 30 1.7
At2g39580.1 68415.m04855 expressed protein 30 1.7
At3g04420.1 68416.m00468 no apical meristem (NAM) family protein... 29 3.0
At4g26330.1 68417.m03786 subtilase family protein contains simil... 29 4.0
At4g13250.1 68417.m02060 short-chain dehydrogenase/reductase (SD... 29 4.0
At4g31230.1 68417.m04433 protein kinase family protein contains ... 28 9.2
At2g40060.1 68415.m04922 expressed protein 28 9.2
At2g05080.1 68415.m00530 hypothetical protein low similarity to ... 28 9.2
At1g55050.1 68414.m06288 expressed protein ; expression supporte... 28 9.2
At1g18670.1 68414.m02330 protein kinase family protein contains ... 28 9.2
>At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 930
Score = 54.8 bits (126), Expect = 7e-08
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
Frame = +3
Query: 42 PFASDPKKQSRYEQFLK-----GV-VVEADEGDRLREWERNRELIEFEQAAKLYKPLSGV 203
PF DP KQ R+EQFLK G+ +++ + + E R +E ++FE AA+ +
Sbjct: 532 PFKDDPAKQERFEQFLKEKYKGGLRTTDSNRVNSMSESARAQERLDFEAAAEAIEKGKAY 591
Query: 204 MEDRFTHASEPDDALNPLTAVARSSTGYGLATSEQIEAAKGGLYGAVTRVEIQWRPEALV 383
E R +P D L T + + ++ Y R E QWRP L+
Sbjct: 592 KEVRRA-TEQPLDFLAGGLQFTSGGTEQ-IKDTGVVDMKSSKTYPK--REEFQWRPSPLL 647
Query: 384 CKRFNVPQPGGANTEEKHQERPKISYSVF 470
CKRF++P P + R K+ VF
Sbjct: 648 CKRFDLPDPFMGKLPPAPRARNKMDSLVF 676
>At4g34060.1 68417.m04833 expressed protein similar to DEMETER
protein [Arabidopsis thaliana] GI:21743571; expression
supported by MPSS
Length = 1073
Score = 32.7 bits (71), Expect = 0.32
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +2
Query: 416 REYRRKTSRATEDFLLRLFVHGVFSTRQRQLRERTSLVQWIKIAES 553
R +R T+R DFL L V+ + R+ + R ++V+W +IA S
Sbjct: 191 RGKKRTTTRRRYDFLCFLLPMPVWKKQSRRSKRRKNMVRWARIASS 236
>At2g29640.1 68415.m03601 josephin family protein contains Pfam
domain PF02099: Josephin; similar to Josephin-like
protein (Swiss-Prot:O82391) [Arabidopsis thaliana]
Length = 360
Score = 31.1 bits (67), Expect = 0.99
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 417 ANTEEK-HQERPKISYSVFSYMESSVHDRDSFAKEQVSFSGSKSLNREPVKIDTRPVSVT 593
A++E K + ER ++ + + + + D+D+F KE ++ K +P K P+S
Sbjct: 2 ADSESKIYHERQRLQFCLLHCLNNLFQDKDAFTKESLNSIAEKLETNDPNKETWTPLSFV 61
Query: 594 STSNKTELVG 623
+ + G
Sbjct: 62 LKPHHNTITG 71
>At4g11280.1 68417.m01824 1-aminocyclopropane-1-carboxylate synthase
6 / ACC synthase 6 (ACS6) identical to GI:3746125
Length = 495
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = +3
Query: 306 QIEAAKGGLYGAVTRVEIQWRPEALVCKRFNVPQPGGANTEEKHQERPKISYSVFSYMES 485
Q+ A+ L G + R + PEA +C V Q + + P+ +V +ME
Sbjct: 53 QMGLAENQLCGDLMRKWVLKHPEASICTSEGVNQFSDIAIFQDYHGLPEFRQAVAKFMEK 112
Query: 486 SVHDRDSFAKEQVSFSGSKSLNREPV 563
+ +++ F +++ SG + E V
Sbjct: 113 TRNNKVKFDPDRIVMSGGATGAHETV 138
>At3g16290.1 68416.m02056 FtsH protease, putative contains
similarity to cell division protein FtsH GI:1652085 from
[Synechocystis sp. PCC 6803]
Length = 876
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +3
Query: 60 KKQSRYEQFLKGVVVEADEGDRLREWERNRELIEFE 167
K++ YE LK EADE ++RE ER E IE E
Sbjct: 326 KQKKDYEDRLKIEKAEADERKKMRELEREMEGIEEE 361
>At2g39580.1 68415.m04855 expressed protein
Length = 1567
Score = 30.3 bits (65), Expect = 1.7
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 453 ISYSVFSYMESSVHDRDSFAKEQVSFSGSKSLNREPVKIDTRPVS-VTSTSNKTELVGAP 629
+S S FS+ +S SFAKE S S R K RP V S SNK + +
Sbjct: 161 LSTSTFSHAATSKVSNLSFAKEMKSNKYIHSSERTVSKDAQRPEQIVESNSNKLQDLKQQ 220
Query: 630 KRMTVAELFLKESEQNKN 683
+ +EL LK ++ K+
Sbjct: 221 IALRESELKLKAAQPKKD 238
>At3g04420.1 68416.m00468 no apical meristem (NAM) family protein
similar to NAC1 (GI:7716952) {Medicago truncatula};
contains Pfam PF02365 : No apical meristem (NAM) protein
Length = 342
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 186 KPLSGVMEDRFTHASEPDDALNPLT-AVARSSTGYGLATSEQI 311
KPL+GV+ D + + D L+P T ++ SST +S+QI
Sbjct: 227 KPLTGVLIDDSSDDDDDSDLLSPTTNSIENSSTCDSFGSSDQI 269
>At4g26330.1 68417.m03786 subtilase family protein contains
similarity to SBT1, a subtilase from tomato plants
GI:1771160 from [Lycopersicon esculentum]
Length = 746
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = -3
Query: 664 SFKNNSATVILLGAPTSSVLFDVDVTETGLVSILTGSRFSDFDPLNETCSFAKLSLSCT 488
+ + N+ +I +PT + +VD+ T V IL G+R ++ + T K+ S T
Sbjct: 396 AIRANALALIFAASPTRQLAEEVDMIPTVRVDILHGTRIRNYLARSPTVPMVKIGPSKT 454
>At4g13250.1 68417.m02060 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198
Short-chain dehydrogenase/reductase (SDR) superfamily
Length = 496
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 90 KGVVVEADEGDRLREWERNRELIEFEQAAKLY 185
+G + A E DRLR W NR + A ++Y
Sbjct: 434 QGRALYAAEADRLRNWAENRTRLSLTDAMEMY 465
>At4g31230.1 68417.m04433 protein kinase family protein contains
Pfam profiles PF00069: Protein kinase domain, PF00582:
universal stress protein family
Length = 764
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -3
Query: 637 ILLGAPTSSVLFDVD-VTETGLVSILTGSRFSDFDPLNETCSFAKLSLSCTE 485
++ G P + V+ E G + L SD+ P+ +T FAKL+L C E
Sbjct: 663 LITGKPPMGLTHYVERALEKGNLKDLLDPAVSDW-PVEDTTEFAKLALKCAE 713
>At2g40060.1 68415.m04922 expressed protein
Length = 258
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 102 VEADEGDRLREWERNRELIEFEQAAKLYKPL 194
+E+DEG LREW R + I+ E+ K K L
Sbjct: 83 MESDEGFALREW-RRQNAIQLEEKEKREKEL 112
>At2g05080.1 68415.m00530 hypothetical protein low similarity to
SP|Q9UUA2 DNA repair and recombination protein pif1,
mitochondrial precursor {Schizosaccharomyces pombe}
Length = 1238
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 421 IQKKNIKSDRRFLTPSFRTWSLQY 492
+QKK+ K D R++ P R+ SL+Y
Sbjct: 470 VQKKDFKCDNRYVIPYNRSLSLRY 493
>At1g55050.1 68414.m06288 expressed protein ; expression supported
by MPSS
Length = 914
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/82 (23%), Positives = 40/82 (48%)
Frame = +3
Query: 438 QERPKISYSVFSYMESSVHDRDSFAKEQVSFSGSKSLNREPVKIDTRPVSVTSTSNKTEL 617
QERP+ + F + +VH+ S A++Q +G +S ++E + P+S+ L
Sbjct: 639 QERPETEPNGFCSISETVHEPSSSAQQQEP-NGLRS-SKEQGALHDEPISLAQQQEPNGL 696
Query: 618 VGAPKRMTVAELFLKESEQNKN 683
+ ++ E E +Q+++
Sbjct: 697 YSSKEQGAFHEHSSTEQQQDES 718
>At1g18670.1 68414.m02330 protein kinase family protein contains
Protein kinases ATP-binding region signature,
PROSITE:PS00107 and Serine/Threonine protein kinases
active-site signature, PROSITE:PS00108
Length = 662
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -3
Query: 694 WTPSFLFCSDSFKNNSATVILLGAPTSSVLFDVDVTETGLVSILTGSRFSDFDP 533
W P F SD+F+ +G T S +F TETG + L RF +F+P
Sbjct: 123 WVP---FRSDAFEKLEK----IGQGTYSSVFRARETETGRIVALKKVRFDNFEP 169
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,738,010
Number of Sequences: 28952
Number of extensions: 347672
Number of successful extensions: 999
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2019160800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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