Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_F12
(893 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 55 7e-10
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 54 2e-09
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 53 3e-09
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 52 6e-09
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 52 6e-09
AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 37 2e-04
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 26 0.35
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 24 1.8
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 22 7.5
AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein pr... 22 7.5
EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive pep... 21 9.9
AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory recept... 21 9.9
AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory recept... 21 9.9
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 55.2 bits (127), Expect = 7e-10
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Frame = +3
Query: 195 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 368
++ E + A L + W D L WN E+G L ++ +LW+PDV++ N+A
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFD 101
Query: 369 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
G + V +NGS ++ + M + +P D Q C KFGS
Sbjct: 102 GTFQTNVVVKHNGSCLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGS 148
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 53.6 bits (123), Expect = 2e-09
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +3
Query: 195 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 368
++ E + A L + W D L WN E+ G ++ +LW+PDV++ N+A
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFD 101
Query: 369 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
G + V +NGS ++ + + + +P D Q C KFGS
Sbjct: 102 GTFQTNVVVKHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 148
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 52.8 bits (121), Expect = 3e-09
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Frame = +3
Query: 195 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 368
++ E + A L + W D L WN E+ G ++ +LW+PDV++ N+A
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFD 101
Query: 369 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
G + V + GS ++ + M + +P D Q C KFGS
Sbjct: 102 GTFQTNVVVKHGGSCLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGS 148
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 52.0 bits (119), Expect = 6e-09
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +3
Query: 237 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 410
L + W D L WN E+G L ++ +LW+PDV++ N+A G + V + GS
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGS 115
Query: 411 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
++ + M + +P D Q C KFGS
Sbjct: 116 CLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGS 148
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 52.0 bits (119), Expect = 6e-09
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +3
Query: 237 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 410
L + W D L WN E+G L ++ +LW+PDV++ N+A G + V + GS
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGS 115
Query: 411 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
++ + M + +P D Q C KFGS
Sbjct: 116 CLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGS 148
>AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor
subunit protein.
Length = 243
Score = 36.7 bits (81), Expect = 2e-04
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Frame = +3
Query: 249 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 401
W D RL++ G T V SE +W PD +N ATT+ ++ RV +
Sbjct: 96 WTDPRLAYGKRP-GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RVHH 151
Query: 402 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
+GS++ RL I+ M L P D Q C + S
Sbjct: 152 SGSITRSIRLTITASCPMNLQYLPMDRQLCHIEIES 187
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 26.2 bits (55), Expect = 0.35
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 378 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPND 479
A+ + N + SW + ++ + + M LDNW ND
Sbjct: 272 AIEGIIFFNLAKSWPQLIEKWSRVEMALDNWKND 305
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 23.8 bits (49), Expect = 1.8
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +1
Query: 433 TLALQFLCS*TIGPTTCRLARSSSVLGCTXSDEMDFVIDKRIYSMFE 573
T+A+ C TI ++ S ++ + + DFV + ++SMFE
Sbjct: 1372 TVAVCDACYSTIEEKNLQVNESGKLIHKIDAQDCDFVDEIEMFSMFE 1418
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 21.8 bits (44), Expect = 7.5
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -1
Query: 425 LYPG-DGAVIRYTGAESVVPGGGC 357
LY G DG+VI E VV G GC
Sbjct: 348 LYLGSDGSVILKNYKEMVVVGCGC 371
>AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein
protein.
Length = 203
Score = 21.8 bits (44), Expect = 7.5
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = -3
Query: 138 SRSYVARSESIMRDSDVAFSHSAALAIAQVRRNGNKNNTSRR 13
++ V+ + +DS AF+ +AQV N N + R
Sbjct: 82 AQGLVSTEMLLKKDSSEAFNEFRTKILAQVHGTNNGTNKNMR 123
>EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive
peptide receptor 1 protein.
Length = 374
Score = 21.4 bits (43), Expect = 9.9
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +3
Query: 126 RTIGSLPPY 152
RT+GSLPP+
Sbjct: 316 RTLGSLPPF 324
>AM292373-1|CAL23185.2| 360|Tribolium castaneum gustatory receptor
candidate 52 protein.
Length = 360
Score = 21.4 bits (43), Expect = 9.9
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +3
Query: 144 PPYSKIVVNLTLHLRHANIRESESTVRILADLQMNW 251
P + K++ NL + H NIRE +A W
Sbjct: 91 PLWFKLLKNLKMVQNHNNIREKSHYCLFVASNCFFW 126
>AM292353-1|CAL23165.2| 651|Tribolium castaneum gustatory receptor
candidate 32 protein.
Length = 651
Score = 21.4 bits (43), Expect = 9.9
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +3
Query: 144 PPYSKIVVNLTLHLRHANIRESESTVRILADLQMNW 251
P + K++ NL + H NIRE +A W
Sbjct: 91 PLWFKLLKNLKMVQNHNNIREKSHYCLFVASNCFFW 126
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,728
Number of Sequences: 336
Number of extensions: 3448
Number of successful extensions: 26
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -