Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_F12
(893 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 63 3e-10
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 61 1e-09
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 5e-09
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 58 7e-09
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 56 3e-08
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 7e-08
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 54 2e-07
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 50 3e-06
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 50 3e-06
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 50 3e-06
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 48 1e-05
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 48 1e-05
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10) 46 5e-05
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 45 7e-05
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 43 3e-04
SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06) 42 7e-04
SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22) 42 7e-04
SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022) 42 9e-04
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 40 0.003
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.004
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 39 0.006
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) 38 0.011
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 37 0.025
SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 35 0.10
SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07) 35 0.10
SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 35 0.10
SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 33 0.24
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 0.52
SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 32 0.72
SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11) 32 0.72
SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07) 31 1.7
SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92) 31 1.7
SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8) 30 2.2
SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36) 29 3.8
SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15) 29 3.8
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0) 29 5.1
SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10) 29 5.1
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) 29 5.1
SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2) 29 6.7
SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043) 28 8.9
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 62.9 bits (146), Expect = 3e-10
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Frame = +3
Query: 171 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLL 347
LTL+ H ++E ++ L+ W D RL+WN E+G + S+ +W PD+ +L
Sbjct: 22 LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80
Query: 348 NAAATTAG--DYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
N+A + +R +++ G V W+ L + T M + ++P D Q C +FGS
Sbjct: 81 NSANKDMDLREKNIRLFINSAGEVLWMNPLILHTSCGMDIAHFPFDNQACELRFGS 136
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 61.3 bits (142), Expect = 1e-09
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Frame = +3
Query: 249 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGD--YALRAR--VSNNGSV 413
W + LSWNA E+G S + ++LW+PD+ L N A ++A Y +A+ VS+ G
Sbjct: 119 WKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYNNADSSADGSLYGFKAKIKVSHTGLN 178
Query: 414 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
W+ ++T + + +P D Q+CT KFGS
Sbjct: 179 MWLAPTILTTSCKINVKYFPFDQQSCTLKFGS 210
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 58.8 bits (136), Expect = 5e-09
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Frame = +3
Query: 189 HANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA-AT 362
H + + TV L W D L+WN ++G + V +W PD+VL N +
Sbjct: 199 HQQLMGAPVTVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYNNVDSD 258
Query: 363 TAGD---YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
++G+ + + + ++G+V W+ + + + + + N+P D Q C +FGS
Sbjct: 259 SSGEMYKFTTKVNIHSDGTVQWLSPIQVKSECKIDITNFPLDEQFCKLEFGS 310
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 58.4 bits (135), Expect = 7e-09
Identities = 34/128 (26%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Frame = +3
Query: 159 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 332
+ + L + LR ++ E + + I ++ W D L WN ++G + ++ +R+W+P
Sbjct: 57 VQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLKWNPDDFGGIKSINIAPDRVWKP 116
Query: 333 DVVLLNAAATTAGDYALRARVSNN------GSVSWIKRLDISTPISMQLDNWPNDMQTCT 494
DV+L N A+T +L ++ N GS +W+ I + + + +P D+Q+C
Sbjct: 117 DVLLYNRASTDLRFGSLNNKIDTNVIVNHDGSTTWLAPAIIKSECKIDVRFFPFDVQSCE 176
Query: 495 FKFGSRMH 518
FGS H
Sbjct: 177 LTFGSWTH 184
Score = 36.7 bits (81), Expect = 0.025
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 159 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 332
+ + L + LR ++ E E + ++ W D L WN ++ G + +++ +++W+P
Sbjct: 475 VQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHFLQWNPDDFSGIKSIIIAPDKVWKP 534
Query: 333 DVVLLN 350
DV+L N
Sbjct: 535 DVLLFN 540
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 56.4 bits (130), Expect = 3e-08
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Frame = +3
Query: 237 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARV------ 395
+++ W D L+WN ++G + V +W+PD++L N A+T +L ++
Sbjct: 26 IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVIL 85
Query: 396 SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMH 518
S++GS +W+ I T + + +P D+Q C KFGS H
Sbjct: 86 SSDGSAAWLSPAIIKTECKVDVRLFPFDVQYCDLKFGSWTH 126
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 55.2 bits (127), Expect = 7e-08
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Frame = +3
Query: 216 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLNAAATTAGDYALR- 386
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN A ++ +
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNE 91
Query: 387 ---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
V +NG V W+ + + + M + ++P D Q C KF S
Sbjct: 92 GNPVLVESNGVVRWLAPVVLKSRCKMDVRSYPFDEQYCGLKFAS 135
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 53.6 bits (123), Expect = 2e-07
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Frame = +3
Query: 180 HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 356
HLR + V + ++ W + L+WN ++G + ++ ++W PD++L N A
Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYNNA 165
Query: 357 ATT-AGD---YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
T AG Y S++G+ W ++ ++ + +P D Q C+ KFGS
Sbjct: 166 DETYAGGLEKYKTSVIASSDGTQEWNSPASFTSTCNINVRYFPFDSQNCSLKFGS 220
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 50.8 bits (116), Expect = 1e-06
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = +3
Query: 237 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN--AAATTAGDYAL--RARVSN 401
+ + W++ L+W+ +G T + V+ +W+PD+VL + T Y RA + +
Sbjct: 64 INLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVLYHNIGFGETGAIYKFDTRATIMH 123
Query: 402 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
NG W +I + ++ + +P D Q C KFGS
Sbjct: 124 NGYTEWFAPTEIHSICAIDITYFPFDEQFCKMKFGS 159
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 50.0 bits (114), Expect = 3e-06
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Frame = +3
Query: 249 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAG---DYALRARVSNNGSV 413
W + L WN +G + VS ++W PD+VL N A A+T G ++ R VS++G
Sbjct: 40 WYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKN 99
Query: 414 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
W+ + S+ ++++ +P D Q C+ KFGS
Sbjct: 100 MWLAPVIFSSSCTIKIKYFPFDDQYCSLKFGS 131
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 50.0 bits (114), Expect = 3e-06
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Frame = +3
Query: 219 VRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGD----YAL 383
+ I+ + + W ++ L+W+ + G T + ++ +W PD+VL ++A + Y
Sbjct: 39 MEIVQIVNVRWDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKT 98
Query: 384 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
+S +GS +W + + + +P D QTC KFGS
Sbjct: 99 HVIISKDGSSAWFSPASFRSTCKIDVTYFPFDEQTCYMKFGS 140
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 49.6 bits (113), Expect = 3e-06
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Frame = +3
Query: 222 RILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA--ATTAGD------ 374
+++ + + W + LSWNA E+ G S VS +R W PD++L N+ +A +
Sbjct: 16 KLIRIIAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNSVRFVDSAEEDDRLGG 75
Query: 375 ----YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
Y + + +NG SW+ + + +P D Q CT +FGS
Sbjct: 76 GTEKYKTQIEIRSNGYNSWLSPAMFKSTCDVNTRYFPFDDQHCTLEFGS 124
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 48.0 bits (109), Expect = 1e-05
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = +3
Query: 237 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAT----TAGDYALRARVSN 401
+ + W + ++WN E+G + + LW+PD+ L N A + + + + +V+
Sbjct: 44 MDVKWENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYNNADSGYDGSLYGFTAKIKVNY 103
Query: 402 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
+G+ +W+ +T + + +P D Q C KFGS
Sbjct: 104 SGTNTWLAPKIFTTSCKINVKYFPFDQQECRLKFGS 139
>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
Length = 240
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Frame = +3
Query: 240 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT---AGDYAL---RARVS 398
+ W + L W+ ++ + + +W PD+ LLN T AG ++ V
Sbjct: 123 ERTWRNPYLKWDKAKYQNRDRVHFDPKEIWVPDISLLNNGDNTVKMAGGRSIFLTNVVVE 182
Query: 399 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
N G W + + SM L WP D QTC KFGS
Sbjct: 183 NTGKCVWSGPVTFTFTCSMALSRWPFDQQTCAMKFGS 219
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 47.2 bits (107), Expect = 2e-05
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Frame = +3
Query: 249 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAA---ATTAGDYAL---RARVSNNGS 410
W D L W+ ++ S + +W PDV L+N AG L V +G
Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLINNGDKLVHVAGGAELFNADTVVRQSGK 463
Query: 411 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
V WI + ++ ++++ WP D Q CT F S
Sbjct: 464 VDWIAQASFTSTCNLRVRFWPMDDQFCTLTFSS 496
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 47.2 bits (107), Expect = 2e-05
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Frame = +3
Query: 237 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAA----TTAGDYALRARVSN 401
L+M W D L WN ++G T + + + +W P V++ N A + R V +
Sbjct: 547 LRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYNQAGDLGESITSSNTPRPVVRS 606
Query: 402 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
+G+V W+ I + + + +P D Q C FGS
Sbjct: 607 DGTVLWMVPTVIKSSCVIDVKYFPFDQQLCKIIFGS 642
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 46.4 bits (105), Expect = 3e-05
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = +3
Query: 237 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGD---YALRARVSN 401
+ + W + L+W+ +G T + V R+WRPD++L N A T G + + ++
Sbjct: 75 IDLKWNNPLLTWDPTHFGNLTSINVDPLRVWRPDLILYNNADRDTDGALDRFYTKVQLKF 134
Query: 402 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
+GS W+ + + + +P D Q+C KFGS
Sbjct: 135 DGSSLWLAPIIFKSTCKFDVAYFPFDEQSCILKFGS 170
>SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10)
Length = 384
Score = 45.6 bits (103), Expect = 5e-05
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Frame = +3
Query: 249 WIDKRLSWNAGEWGCSTWLVSSER-LWRPDVVLL-NAAATTAG--DYA-LRARVSNNGSV 413
W+++ +W+ E+G +V R +W+PD++L N G D+ R R++++G
Sbjct: 2 WLNQLTTWDPEEYGGVKEVVLQARDVWQPDIILYQNIIQDFDGRLDHTNTRVRITSSGMT 61
Query: 414 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMH 518
W + T ++ + ++P D Q C FGS H
Sbjct: 62 YWSMPFVVVTLCTINVSDFPFDTQQCKLTFGSWQH 96
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 45.2 bits (102), Expect = 7e-05
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Frame = +3
Query: 240 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA--ATTAGDYALRARVS--NN 404
+ W D L W+ + G T + V LW+PD+VL N Y +V +
Sbjct: 88 RQTWTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYNNVNDEDRGEQYLFNTKVIIYST 147
Query: 405 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
G + W + T + + +P D QTC FGS
Sbjct: 148 GDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGS 182
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +3
Query: 243 MNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 356
+ W++ LSWNA E+G +T V +RLW PD+VL N A
Sbjct: 77 VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYNNA 115
>SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06)
Length = 147
Score = 41.9 bits (94), Expect = 7e-04
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Frame = +3
Query: 249 WIDKRLSWNA-GEWGCSTWLVSSERLWRPDVVLLNAAATT---AGD---YALRARVSNNG 407
W D L W ++ + S + +W PDV L+N A + AG + V G
Sbjct: 2 WNDVFLKWRGEAKYQVTKTRFSPQEIWVPDVALINNADKSVRLAGGPELFKTDLNVWQGG 61
Query: 408 SVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
V W+ ++ +++ WP D Q CT F S
Sbjct: 62 KVEWVAPASFTSDCKLRVRYWPIDDQFCTLTFSS 95
>SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22)
Length = 636
Score = 41.9 bits (94), Expect = 7e-04
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
Frame = +3
Query: 249 WIDKRLSWNAGEWGCSTWLVSS--ERLWRPDVVLLNAAATTA----GDYALRARVSNNGS 410
W DKRL AG+ S L S W+PD NA + D R + +G
Sbjct: 273 WTDKRL---AGKLNLSITLTGSAASNAWKPDPYCYNARQSNMMLEDKDVNSRLSIDPDGK 329
Query: 411 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
+ + + + I M L ++P D Q C KFGS
Sbjct: 330 IFYSRGVSIVASCEMDLHDFPLDTQNCYLKFGS 362
>SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022)
Length = 91
Score = 41.5 bits (93), Expect = 9e-04
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +3
Query: 315 ERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 494
+++W+PD + N ++T + + G V + +R+ + M L N+P D Q+C+
Sbjct: 26 KQIWKPDTYINNEKSSTVPENQFLLTIDPEGRVVYSQRMTVVASCMMYLRNYPMDTQSCS 85
Query: 495 FKFGS 509
F S
Sbjct: 86 ISFES 90
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 39.9 bits (89), Expect = 0.003
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 159 IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 332
+ V L L L ++ + T+ ++ ++ W D RL WN + G ++ + RLW P
Sbjct: 38 VPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVSAYDGVDNIVIKASRLWLP 97
Query: 333 DVVLLNAA 356
D+ L N A
Sbjct: 98 DITLYNNA 105
>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 39.5 bits (88), Expect = 0.004
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Frame = +3
Query: 249 WIDKRLSWNAGEWGCSTWLVSSE--RLWRPDVVLLNA--AATTAGDYALRARVS--NNGS 410
W D+RL A S L E ++WRPD NA ++ TA D + + ++ NG
Sbjct: 12 WKDERL---ANRLNKSVVLKGDEITKMWRPDPFCYNARESSLTASDDDINSMMTIHPNGD 68
Query: 411 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
V + + I+ M+L ++P D Q C K GS
Sbjct: 69 VVYSRMTIITAECEMKLHDFPMDEQQCHLKLGS 101
>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 39.1 bits (87), Expect = 0.005
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Frame = +3
Query: 156 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS----ER 320
++VV+L + + +++ ++ I L+ W D L +N +++ + ++
Sbjct: 78 QVVVDLVI-ISMSSLDDNNMEYTISFYLRQTWHDPLLRYNKSSLVNAASYATLNYALVDK 136
Query: 321 LWRPDVVLLNAAATTAG--DYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 485
+W+PD L N AG D +L RV NG+V++ R+ + M+ N+P D Q
Sbjct: 137 IWKPDTYLENVKKIDAGSDDKSLVHKGFRVYPNGNVTFSTRISATLSCKMEFRNFPMDRQ 196
Query: 486 TCTFKFGS 509
+C S
Sbjct: 197 SCPVTISS 204
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +3
Query: 237 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNN 404
+ + W D RL WN ++G +++ S +LW PD+ L N A + V+++
Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYNNANDNYEKEKEEYYGLTVNSD 335
Query: 405 GSVSWIKRLDISTPISMQLDNWPNDMQ 485
GS+ W + ++ + +P D Q
Sbjct: 336 GSIGWYYPTIFKSSCTIDVTYFPFDDQ 362
>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
Length = 79
Score = 37.9 bits (84), Expect = 0.011
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 216 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 350
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 36.7 bits (81), Expect = 0.025
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 237 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 350
++MNW + L WNA E+G L +S +W PD+VL N
Sbjct: 84 VRMNWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122
>SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 319
Score = 34.7 bits (76), Expect = 0.10
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 393 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
V+N G V W + S+++ WP D+Q C+ FGS
Sbjct: 21 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGS 59
>SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07)
Length = 134
Score = 34.7 bits (76), Expect = 0.10
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 375 YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
+ + +VS+ G W+ ++T + + +P D Q+CT KFGS
Sbjct: 13 FKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLKFGS 57
>SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 400
Score = 34.7 bits (76), Expect = 0.10
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 393 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
V+N G V W + S+++ WP D+Q C+ FGS
Sbjct: 102 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGS 140
>SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 480
Score = 33.5 bits (73), Expect = 0.24
Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 1/113 (0%)
Frame = +3
Query: 159 IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPD 335
+ VN+++ ++ + I+ES + L+ W D RL+ S +W PD
Sbjct: 97 VQVNISMAVQSFSQIKESNMEFEVFMYLRQEWNDPRLAHGYRAL-LSLAKDRVNDIWLPD 155
Query: 336 VVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 494
NA + + NG + + R + M L N+P D+Q C+
Sbjct: 156 TYFNNANEYEVYIVNQLSLIKPNGDIYYSGRNKVKGACQMDLFNFPLDVQRCS 208
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 28.3 bits (60), Expect(2) = 0.52
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 228 LADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 350
+ DLQ W + L+W+ ++G + V+ E +W PD+V+ N
Sbjct: 1467 IVDLQ--WENPILTWDPRDYGGVQEINVAPEEVWVPDIVIYN 1506
Score = 22.6 bits (46), Expect(2) = 0.52
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 468 WPNDMQTCTFKFGSRMH 518
+P D Q C KFGS H
Sbjct: 1509 FPFDEQKCLLKFGSWTH 1525
>SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 32.3 bits (70), Expect = 0.54
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +3
Query: 321 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQT 488
LW PD NA + + D + + ++ +GS+ + + I M L ++P D QT
Sbjct: 17 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 76
Query: 489 CTFKFGS 509
C FGS
Sbjct: 77 CNLVFGS 83
>SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 32.3 bits (70), Expect = 0.54
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +3
Query: 321 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQT 488
LW PD NA + + D + + ++ +GS+ + + I M L ++P D QT
Sbjct: 144 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 203
Query: 489 CTFKFGS 509
C FGS
Sbjct: 204 CNLVFGS 210
>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
Length = 191
Score = 31.9 bits (69), Expect = 0.72
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 156 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 332
K +V LH + A + S S VR+ +++ W + L WN ++G T V+ +W P
Sbjct: 69 KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126
Query: 333 DVVLLN 350
D+VL N
Sbjct: 127 DIVLYN 132
>SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11)
Length = 269
Score = 31.9 bits (69), Expect = 0.72
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 384 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
+A V +NG W +I + + + +P D Q C KFGS
Sbjct: 21 KATVKHNGYTEWFAPTEIHSICKIDITFFPFDEQFCKLKFGS 62
>SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 348 NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
N A T + + ++ N+G W I + ++ + +P D Q C KFGS
Sbjct: 5 NVPAGTLYQFKTKVQLFNDGLCVWYAPTIIQSGCNIDITYFPFDDQLCELKFGS 58
>SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07)
Length = 301
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 390 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFK 500
R+ NG++ + RL +++ M L N+P D Q C K
Sbjct: 64 RIFPNGTLLYSMRLKVTSQCPMDLRNFPMDSQKCRLK 100
>SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)
Length = 88
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 249 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVL 344
W + L+WN E+G T VS +W PD+VL
Sbjct: 53 WYNPLLTWNVTEYGGLKTINVSPTIIWLPDIVL 85
>SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)
Length = 156
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 249 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 350
W ++ L+W+ E+G ST V+ +++W PD+ L N
Sbjct: 2 WRNEYLTWDPKEFGGISTINVNVDKVWVPDIYLYN 36
>SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36)
Length = 592
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 399 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMH 518
+NG+ W + + +++ +P D QTC KFGS H
Sbjct: 207 SNGTNKWRSPALLKSICKIKVKFFPFDSQTCKLKFGSFSH 246
>SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)
Length = 296
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Frame = +3
Query: 315 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 485
+ +W P NA D + NG V + RL I+ + L +P+D+Q
Sbjct: 32 DEIWIPSTYFFNAKKAYFHDVTTENYLLMIKPNGDVFYSVRLTITMACKLTLQMFPHDVQ 91
Query: 486 TC 491
C
Sbjct: 92 VC 93
>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
Length = 360
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 297 TWLVSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNG 407
TWL+ +WRPD+VL +A D L R ++++NG
Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNG 306
>SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10)
Length = 517
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +3
Query: 321 LWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 491
+W PD V ++A+ + + + V+ G V W R + M L +P D QTC
Sbjct: 38 VWVPDTVFVDASHAYMHNVMVANHKLDVTPGGRVFWGTRATLIARCHMNLRRYPMDEQTC 97
>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
Length = 428
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +3
Query: 237 LQMNWIDKRLSWNAG-EWGCSTWLVSSERLWRPDVVLLN 350
+ W D L WN G V +W PD+ L+N
Sbjct: 28 IYQEWKDPNLKWNKSIAQGVEEIFVDPSDIWTPDIALMN 66
>SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2)
Length = 75
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +3
Query: 393 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 509
+ + G + W + T + + +P D QTC FGS
Sbjct: 19 IYSTGDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGS 57
>SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 28.3 bits (60), Expect = 8.9
Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
Frame = +3
Query: 159 IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPD 335
+VV + +++ + I + +++ + W D RL+++ E + +W PD
Sbjct: 71 VVVYVDIYIVNIGEISVTNMDYKLMLYYRQTWHDPRLAFDLPE-AITVQGGMLNDIWIPD 129
Query: 336 VVLLNAAATT-----AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 491
+ N ++T +Y L + NG+ R+ ++ M L +P D QTC
Sbjct: 130 TLFTNEKSSTFHKVTQDNYLLS--IWPNGTTYLSMRISLTGICPMDLRKYPMDTQTC 184
>SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 198 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAA 359
I E V + ++ NW D RL+ N + + E++WRPD NA A
Sbjct: 42 IEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTITFTRGDIEKVWRPDTYCSNAHA 94
>SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043)
Length = 137
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 198 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAA 359
I E V + ++ NW D RL+ N + + E++WRPD NA A
Sbjct: 42 IEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTITFTRGDIEKVWRPDTYCSNAHA 94
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,667,316
Number of Sequences: 59808
Number of extensions: 471926
Number of successful extensions: 1296
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2562198215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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