Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_F11
         (887 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   0.60 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   9.8  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.8  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.8  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = +2

Query: 464 PCTRPST--HY*SFICQHSCDCFVQHRLPTKICGHCYPM 574
           P T P T  H    I Q SC   +Q  L  KI  H YP+
Sbjct: 128 PPTLPVTSIHLRGAIGQRSCQVVIQCYLEIKIDEHLYPV 166


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 708 RXTVEEPNQPQHPSAGHGEAHHE 640
           R  ++EP   QH    HG   HE
Sbjct: 95  RPKLQEPQPSQHCPRKHGYFAHE 117


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -2

Query: 691 TKSTTTSQRWSRGSTPRSLNTSRANNHHIKPIEW 590
           T STT    W+R  +  S + S+      KP +W
Sbjct: 403 TISTTPRPEWARPPSTPSADGSKPVQTTPKPGQW 436


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 524 SNHRNVDI*SFSNGLMVLCRVQYNQETRFT 435
           S  RN++  SF   L++LC +       FT
Sbjct: 268 SKSRNIEGVSFGTNLVILCALWITTLLLFT 297


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 284 YDSTSSQNKFFPG 246
           +DS S QN  FPG
Sbjct: 740 FDSRSRQNSSFPG 752


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,185
Number of Sequences: 336
Number of extensions: 5318
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)