Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_F11
         (887 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    25   4.1  
AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450 CY...    24   7.1  
AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450 CY...    24   7.1  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    24   7.1  
AY748846-1|AAV28192.1|  147|Anopheles gambiae cytochrome P450 pr...    23   9.4  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
 Frame = +3

Query: 63  VVTQISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTH--VIN 236
           +VT+++  +  G+D+LA  +EDV + L        E       T +++RR DGT    + 
Sbjct: 202 IVTEMAEVLITGIDMLA-KKEDVERGL----QRALERTAVAATTSLWERR-DGTQRARVR 255

Query: 237 LRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLK 353
           L R    L+L  R VV       V ++ S P  Q++ ++
Sbjct: 256 LPRRDTDLLLDKRIVVG----HSVCLVRSAPKQQQSAVR 290


>AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450
           CYPm3r9 protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 640 FVVCFPVTSAGMLWLIWFFYRXPEESEKGEQQAKE 744
           F+  F  +S  + W ++     PE  EKG +  +E
Sbjct: 302 FLAGFETSSTLLTWTLYELALNPEVQEKGRECVRE 336


>AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450
           CYP6M1 protein.
          Length = 503

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 640 FVVCFPVTSAGMLWLIWFFYRXPEESEKGEQQAKE 744
           F   F  +S  + W ++     PE  EKG Q  +E
Sbjct: 301 FFAGFETSSTLLTWTLYELALNPEVQEKGRQCVQE 335


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 17/59 (28%), Positives = 25/59 (42%)
 Frame = -2

Query: 784 TGAXTFGLAVPQPVPWLVVHPFHFLQXHGRRTKSTTTSQRWSRGSTPRSLNTSRANNHH 608
           TGA   G      V +  + P  FL    ++ +S  TSQ     S   S  T+  NN++
Sbjct: 86  TGAVGGGHQSTDMVDYTQLQPQKFLLSQQQQPQSALTSQSCKYASEGPSTGTNVINNNN 144


>AY748846-1|AAV28192.1|  147|Anopheles gambiae cytochrome P450
           protein.
          Length = 147

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 661 TSAGMLWLIWFFYRXPEESEKGEQQ 735
           T+AGM W ++     PE  E+  Q+
Sbjct: 55  TTAGMSWALFLLALHPEVQERVHQE 79


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 955,613
Number of Sequences: 2352
Number of extensions: 22607
Number of successful extensions: 43
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)