Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_F07
(896 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4S3I6 Cluster: Chromosome 1 SCAF14749, whole genome sh... 38 0.35
UniRef50_Q4S3I4 Cluster: Chromosome 1 SCAF14749, whole genome sh... 37 0.61
UniRef50_Q2XWK6 Cluster: Nicotinic acetylcholine receptor subuni... 37 0.61
UniRef50_P43681 Cluster: Neuronal acetylcholine receptor subunit... 36 1.9
UniRef50_Q4S864 Cluster: Chromosome 5 SCAF14709, whole genome sh... 35 2.4
UniRef50_Q4S866 Cluster: Chromosome 5 SCAF14709, whole genome sh... 35 3.2
UniRef50_UPI0000E49401 Cluster: PREDICTED: similar to alpha 10 s... 34 5.7
UniRef50_UPI0000E48B7E Cluster: PREDICTED: similar to neuronal n... 34 5.7
UniRef50_Q7T2S3 Cluster: Nicotinic acetylcholine receptor alpha ... 34 5.7
UniRef50_Q4RR58 Cluster: Chromosome 14 SCAF15003, whole genome s... 34 5.7
UniRef50_UPI0000E49402 Cluster: PREDICTED: similar to alpha 10 s... 33 9.9
UniRef50_Q93329 Cluster: Putative uncharacterized protein lev-8;... 33 9.9
UniRef50_Q66T35 Cluster: Nicotinic acetylcholine receptor subuni... 33 9.9
UniRef50_P91766 Cluster: Acetylcholine receptor subunit alpha-li... 33 9.9
>UniRef50_Q4S3I6 Cluster: Chromosome 1 SCAF14749, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 1 SCAF14749, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 340
Score = 37.9 bits (84), Expect = 0.35
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLLN-AXGXTAGDYALRARVSNNGSVSW 456
P + +W PD+VL N A G Y A +SNNG V+W
Sbjct: 89 PTQHIWLPDIVLYNNADGTYEVSYYSNAVISNNGEVNW 126
>UniRef50_Q4S3I4 Cluster: Chromosome 1 SCAF14749, whole genome
shotgun sequence; n=2; Euteleostomi|Rep: Chromosome 1
SCAF14749, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 503
Score = 37.1 bits (82), Expect = 0.61
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLL-NAXGXTAGDYALRARVSNNGSVSW 456
P E LW PD+VL NA G G +A V NG+++W
Sbjct: 89 PSENLWLPDIVLYENADGRFEGSLMTKAIVRYNGAITW 126
>UniRef50_Q2XWK6 Cluster: Nicotinic acetylcholine receptor subunit
type G; n=1; Lymnaea stagnalis|Rep: Nicotinic
acetylcholine receptor subunit type G - Lymnaea
stagnalis (Great pond snail)
Length = 618
Score = 37.1 bits (82), Expect = 0.61
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLLN-AXGXTAGDYALRARVSNNGSVSW 456
P E+LW PD+VL N A T G +A V +NG+V W
Sbjct: 165 PCEKLWLPDIVLYNSADDYTTGYMNSKAMVQHNGTVFW 202
>UniRef50_P43681 Cluster: Neuronal acetylcholine receptor subunit
alpha-4 precursor; n=35; Euteleostomi|Rep: Neuronal
acetylcholine receptor subunit alpha-4 precursor - Homo
sapiens (Human)
Length = 627
Score = 35.5 bits (78), Expect = 1.9
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLL-NAXGXTAGDYALRARVSNNGSVSW 456
P E +WRPD+VL NA G A + +A + ++G V W
Sbjct: 114 PSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQW 151
>UniRef50_Q4S864 Cluster: Chromosome 5 SCAF14709, whole genome
shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 5
SCAF14709, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 733
Score = 35.1 bits (77), Expect = 2.4
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLL-NAXGXTAGDYALRARVSNNGSVSW 456
P R+W+PD+VL NA G D +A + NG V+W
Sbjct: 254 PSSRIWKPDIVLYNNAVGDFQVDDKTKALLRYNGDVTW 291
>UniRef50_Q4S866 Cluster: Chromosome 5 SCAF14709, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 5 SCAF14709, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 34.7 bits (76), Expect = 3.2
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLL-NAXGXTAGDYALRARVSNNGSVSW 456
P +R+WRPDVVL N+ G G +A V ++G+++W
Sbjct: 70 PSDRIWRPDVVLYDNSDGRFEGT-VTKAVVKHDGTITW 106
>UniRef50_UPI0000E49401 Cluster: PREDICTED: similar to alpha 10
subunit of nicotinic acetylcholine receptor; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
alpha 10 subunit of nicotinic acetylcholine receptor -
Strongylocentrotus purpuratus
Length = 347
Score = 33.9 bits (74), Expect = 5.7
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLL-NAXGXTAGDYALRARVSNNGSVSW 456
P +W+PD++L NA G A VSN+G V+W
Sbjct: 113 PSSNIWKPDILLYNNADSSFKGAMKTNAAVSNDGIVTW 150
>UniRef50_UPI0000E48B7E Cluster: PREDICTED: similar to neuronal
nicotinic acetylcholine receptor alpha3 subunit; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
neuronal nicotinic acetylcholine receptor alpha3 subunit
- Strongylocentrotus purpuratus
Length = 525
Score = 33.9 bits (74), Expect = 5.7
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLL-NAXGXTAGDYALRARVSNNGSVSW 456
P E +WRPD++L NA G + + A V G+V+W
Sbjct: 110 PAENIWRPDILLYNNANGNFDVQFLVNAIVKYTGTVTW 147
>UniRef50_Q7T2S3 Cluster: Nicotinic acetylcholine receptor alpha 4
subunit; n=2; Tetraodontidae|Rep: Nicotinic
acetylcholine receptor alpha 4 subunit - Fugu rubripes
(Japanese pufferfish) (Takifugu rubripes)
Length = 622
Score = 33.9 bits (74), Expect = 5.7
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLL-NAXGXTAGDYALRARVSNNGSVSW 456
P E +WRPD+VL NA G A + +A++ +G + W
Sbjct: 88 PSEIIWRPDIVLYNNADGDFAVTHLTKAQLFYDGRIKW 125
>UniRef50_Q4RR58 Cluster: Chromosome 14 SCAF15003, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 14 SCAF15003, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 470
Score = 33.9 bits (74), Expect = 5.7
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLL-NAXGXTAGDYALRARVSNNGSVSW 456
P E +W PD+VL NA G A + +A + +NG + W
Sbjct: 81 PSELIWVPDIVLYNNADGEFAVTHMTKAHLFHNGKIRW 118
>UniRef50_UPI0000E49402 Cluster: PREDICTED: similar to alpha 10
subunit of nicotinic acetylcholine receptor; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
alpha 10 subunit of nicotinic acetylcholine receptor -
Strongylocentrotus purpuratus
Length = 473
Score = 33.1 bits (72), Expect = 9.9
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLL-NAXGXTAGDYALRARVSNNGSVSW 456
P E +WRPD+VL NA G A +S++G V W
Sbjct: 101 PIETIWRPDIVLFTNADSSFNGMMMTSASISHDGIVRW 138
>UniRef50_Q93329 Cluster: Putative uncharacterized protein lev-8;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein lev-8 - Caenorhabditis elegans
Length = 531
Score = 33.1 bits (72), Expect = 9.9
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWG 326
L+M W DK+L+WN +WG
Sbjct: 81 LEMQWYDKKLTWNPTDWG 98
>UniRef50_Q66T35 Cluster: Nicotinic acetylcholine receptor subunit
alpha 3; n=7; Coelomata|Rep: Nicotinic acetylcholine
receptor subunit alpha 3 - Anopheles gambiae (African
malaria mosquito)
Length = 710
Score = 33.1 bits (72), Expect = 9.9
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLL-NAXGXTAGDYALRARVSNNGSVSW 456
P + +WRPD+VL NA G A +A ++ G V W
Sbjct: 101 PSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 138
>UniRef50_P91766 Cluster: Acetylcholine receptor subunit alpha-like
precursor; n=31; Coelomata|Rep: Acetylcholine receptor
subunit alpha-like precursor - Manduca sexta (Tobacco
hawkmoth) (Tobacco hornworm)
Length = 516
Score = 33.1 bits (72), Expect = 9.9
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLL-NAXGXTAGDYALRARVSNNGSVSW 456
P + +WRPD+VL NA G A +A ++ G V W
Sbjct: 102 PSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 139
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,062,804
Number of Sequences: 1657284
Number of extensions: 10581479
Number of successful extensions: 31634
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 29466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31434
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81161904978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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