Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_F07
(896 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic ac... 34 0.30
AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic ac... 34 0.30
AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic ac... 34 0.30
AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-P... 34 0.30
AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-P... 34 0.30
AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-P... 34 0.30
AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic ac... 33 0.40
Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic acet... 33 0.53
Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic acet... 33 0.53
AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA... 33 0.53
AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic ac... 31 2.1
AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic ac... 31 2.1
AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-P... 31 2.1
AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-P... 31 2.1
AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-P... 31 2.1
X07194-1|CAA30172.1| 567|Drosophila melanogaster mature acetylc... 29 6.5
X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D. m... 29 8.6
X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR... 29 8.6
M20316-1|AAA28311.1| 521|Drosophila melanogaster protein ( D.me... 29 8.6
AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1 pr... 29 8.6
AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA... 29 8.6
AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA... 29 8.6
AE013599-450|AAF59230.1| 1379|Drosophila melanogaster CG2105-PA,... 29 8.6
AE013599-449|AAS64900.1| 1397|Drosophila melanogaster CG2105-PB,... 29 8.6
>EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 protein.
Length = 560
Score = 33.9 bits (74), Expect = 0.30
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLLN-AXGXTAGDYALRARVSNNGS 447
P RLW+PDV++ N A G YA V NNGS
Sbjct: 138 PPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172
>AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 subunit protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.30
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLLN-AXGXTAGDYALRARVSNNGS 447
P RLW+PDV++ N A G YA V NNGS
Sbjct: 138 PPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172
>AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha7 protein.
Length = 542
Score = 33.9 bits (74), Expect = 0.30
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLLN-AXGXTAGDYALRARVSNNGS 447
P RLW+PDV++ N A G YA V NNGS
Sbjct: 116 PPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 150
>AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-PC,
isoform C protein.
Length = 219
Score = 33.9 bits (74), Expect = 0.30
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLLN-AXGXTAGDYALRARVSNNGS 447
P RLW+PDV++ N A G YA V NNGS
Sbjct: 138 PPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172
>AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-PA,
isoform A protein.
Length = 560
Score = 33.9 bits (74), Expect = 0.30
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLLN-AXGXTAGDYALRARVSNNGS 447
P RLW+PDV++ N A G YA V NNGS
Sbjct: 138 PPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 172
>AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-PB,
isoform B protein.
Length = 541
Score = 33.9 bits (74), Expect = 0.30
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLLN-AXGXTAGDYALRARVSNNGS 447
P RLW+PDV++ N A G YA V NNGS
Sbjct: 119 PPHRLWKPDVLMYNSADEGFDGTYATNVVVRNNGS 153
>AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha 4 subunit protein.
Length = 568
Score = 33.5 bits (73), Expect = 0.40
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLL-NAXGXTAGDYALRARVSNNGSVSW 456
P + +WRPD+VL NA G A +A + + G V W
Sbjct: 118 PSDHIWRPDIVLYNNADGNFEVTLATKATIYSEGLVEW 155
>Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 776
Score = 33.1 bits (72), Expect = 0.53
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLL-NAXGXTAGDYALRARVSNNGSVSW 456
P + +WRPD+VL NA G A +A ++ G V W
Sbjct: 84 PSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 121
>Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 795
Score = 33.1 bits (72), Expect = 0.53
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLL-NAXGXTAGDYALRARVSNNGSVSW 456
P + +WRPD+VL NA G A +A ++ G V W
Sbjct: 103 PSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 140
>AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA
protein.
Length = 783
Score = 33.1 bits (72), Expect = 0.53
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLL-NAXGXTAGDYALRARVSNNGSVSW 456
P + +WRPD+VL NA G A +A ++ G V W
Sbjct: 103 PSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 140
>AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 482
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLLN-AXGXTAGDYALRARVSNNGS 447
P R+W+PDV++ N A G Y V NNGS
Sbjct: 390 PPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 424
>AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 807
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLLN-AXGXTAGDYALRARVSNNGS 447
P R+W+PDV++ N A G Y V NNGS
Sbjct: 389 PPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 423
>AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-PA,
isoform A protein.
Length = 570
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLLN-AXGXTAGDYALRARVSNNGS 447
P R+W+PDV++ N A G Y V NNGS
Sbjct: 341 PPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 375
>AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-PB,
isoform B protein.
Length = 808
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLLN-AXGXTAGDYALRARVSNNGS 447
P R+W+PDV++ N A G Y V NNGS
Sbjct: 390 PPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 424
>AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-PC,
isoform C protein.
Length = 786
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLLN-AXGXTAGDYALRARVSNNGS 447
P R+W+PDV++ N A G Y V NNGS
Sbjct: 390 PPHRIWKPDVLMYNSADEGFDGTYQTNVVVRNNGS 424
>X07194-1|CAA30172.1| 567|Drosophila melanogaster mature
acetylcholine receptoralpha-like subunit protein.
Length = 567
Score = 29.5 bits (63), Expect = 6.5
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLL-NAXGXTAGDYALRARVSNNGSVSW 456
P E +W PD+VL NA G +A + + G V W
Sbjct: 102 PSEHIWHPDIVLYNNADGNYEVTIMTKAILHHTGKVVW 139
>X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D.
melanogaster ardgene exons 1-2 (fragment Xba-IN2 of
gARD5) for nicotinicacetylcholine receptor. ).
Length = 521
Score = 29.1 bits (62), Expect = 8.6
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLL-NAXGXTAGDYALRARVSNNGSVSW 456
P +++W+PD+VL NA G Y + G V W
Sbjct: 105 PPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPTGEVLW 142
>X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR
protein.
Length = 521
Score = 29.1 bits (62), Expect = 8.6
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLL-NAXGXTAGDYALRARVSNNGSVSW 456
P +++W+PD+VL NA G Y + G V W
Sbjct: 105 PPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPTGEVLW 142
>M20316-1|AAA28311.1| 521|Drosophila melanogaster protein (
D.melanogaster acetylcholinereceptor-related protein
mRNA, complete cds. ).
Length = 521
Score = 29.1 bits (62), Expect = 8.6
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLL-NAXGXTAGDYALRARVSNNGSVSW 456
P +++W+PD+VL NA G Y + G V W
Sbjct: 105 PPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPTGEVLW 142
>AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1
protein.
Length = 1795
Score = 29.1 bits (62), Expect = 8.6
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 122 ATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTGADTGRSSNELDR 292
A SL L I L +T R PP + + N T + +SE++ T + LD+
Sbjct: 1237 AHSLRLSIQQLASTQKRSIPPKTLVTHNTTKEPEDSEYYDSETSEQYTDEDNEVLDK 1293
>AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA
protein.
Length = 1795
Score = 29.1 bits (62), Expect = 8.6
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 122 ATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTGADTGRSSNELDR 292
A SL L I L +T R PP + + N T + +SE++ T + LD+
Sbjct: 1237 AHSLRLSIQQLASTQKRSIPPKTLVTHNTTKEPEDSEYYDSETSEQYTDEDNEVLDK 1293
>AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA,
isoform A protein.
Length = 521
Score = 29.1 bits (62), Expect = 8.6
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 PRERLWRPDVVLL-NAXGXTAGDYALRARVSNNGSVSW 456
P +++W+PD+VL NA G Y + G V W
Sbjct: 105 PPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPTGEVLW 142
>AE013599-450|AAF59230.1| 1379|Drosophila melanogaster CG2105-PA,
isoform A protein.
Length = 1379
Score = 29.1 bits (62), Expect = 8.6
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 101 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESES 250
S + E A+SL+L ++SLL YD++ K V L L +I ES S
Sbjct: 28 SRSRSERASSLALPLNSLLDFYDKQQ-EQCKSVTLLPLPSNSGSISESSS 76
>AE013599-449|AAS64900.1| 1397|Drosophila melanogaster CG2105-PB,
isoform B protein.
Length = 1397
Score = 29.1 bits (62), Expect = 8.6
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 101 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESES 250
S + E A+SL+L ++SLL YD++ K V L L +I ES S
Sbjct: 28 SRSRSERASSLALPLNSLLDFYDKQQ-EQCKSVTLLPLPSNSGSISESSS 76
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,263,279
Number of Sequences: 53049
Number of extensions: 512539
Number of successful extensions: 1495
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1491
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -