Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_F05
(901 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 60 2e-11
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 58 7e-11
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 58 1e-10
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 56 4e-10
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 56 4e-10
AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 44 1e-06
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 27 0.26
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 25 0.61
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 25 0.61
AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein pr... 25 0.81
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 22 7.5
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 22 7.5
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 60.1 bits (139), Expect = 2e-11
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Frame = +1
Query: 154 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSS 330
ES P ++ LTL + ++ E + A L + W D L WN E+G L ++
Sbjct: 25 ESEP-LEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITP 82
Query: 331 ERLWRPDVVLLNAAATTA-GDYALRARVSNNGSISWIKRLDISTPISMQLDNWPNDMQTC 507
+LW+PDV++ N+A G + V +NGS ++ + M + +P D Q C
Sbjct: 83 NKLWKPDVLMYNSADEGFDGTFQTNVVVKHNGSCLYVPPGIFKSTCKMDITWFPFDDQHC 142
Query: 508 TFKFGSRMHNSDEMD 552
KFGS ++ +++D
Sbjct: 143 DMKFGSWTYDGNQLD 157
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 58.4 bits (135), Expect = 7e-11
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Frame = +1
Query: 154 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSS 330
ES P ++ LTL + ++ E + A L + W D L WN E+G L ++
Sbjct: 25 ESEP-LEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITP 82
Query: 331 ERLWRPDVVLLNAAATTA-GDYALRARVSNNGSISWIKRLDISTPISMQLDNWPNDMQTC 507
+LW+PDV++ N+A G + V +NGS ++ + + + +P D Q C
Sbjct: 83 NKLWKPDVLMYNSADEGFDGTFQTNVVVKHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 142
Query: 508 TFKFGSRMHNSDEMD 552
KFGS ++ +++D
Sbjct: 143 DMKFGSWTYDGNQLD 157
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 57.6 bits (133), Expect = 1e-10
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Frame = +1
Query: 154 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSS 330
ES P ++ LTL + ++ E + A L + W D L WN E+G L ++
Sbjct: 25 ESEP-LEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITP 82
Query: 331 ERLWRPDVVLLNAAATTA-GDYALRARVSNNGSISWIKRLDISTPISMQLDNWPNDMQTC 507
+LW+PDV++ N+A G + V + GS ++ + M + +P D Q C
Sbjct: 83 NKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGSCLYVPPGIFKSTCKMDITWFPFDDQHC 142
Query: 508 TFKFGSRMHNSDEMD 552
KFGS ++ +++D
Sbjct: 143 DMKFGSWTYDGNQLD 157
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 56.0 bits (129), Expect = 4e-10
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 426
L + W D L WN E+G L ++ +LW+PDV++ N+A G + V + GS
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGS 115
Query: 427 ISWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 552
++ + M + +P D Q C KFGS ++ +++D
Sbjct: 116 CLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGSWTYDGNQLD 157
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 56.0 bits (129), Expect = 4e-10
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 426
L + W D L WN E+G L ++ +LW+PDV++ N+A G + V + GS
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGS 115
Query: 427 ISWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 552
++ + M + +P D Q C KFGS ++ +++D
Sbjct: 116 CLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGSWTYDGNQLD 157
>AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor
subunit protein.
Length = 243
Score = 44.4 bits (100), Expect = 1e-06
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Frame = +1
Query: 109 SLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNWIDK 276
++S ++DS +YD+ P+ + V +T++ L +++ E + + + W D
Sbjct: 40 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 99
Query: 277 RLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSI 429
RL++ G T V SE +W PD +N ATT+ ++ RV ++GSI
Sbjct: 100 RLAYGKRP-GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RVHHSGSI 155
Query: 430 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 525
+ RL I+ M L P D Q C + S
Sbjct: 156 TRSIRLTITASCPMNLQYLPMDRQLCHIEIES 187
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 26.6 bits (56), Expect = 0.26
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
Frame = +1
Query: 376 TTAGDYALRARVSNNGSI------SWIKRLDISTPISMQLDNWPND 495
TT G + A + G I SW + ++ + + M LDNW ND
Sbjct: 260 TTFGSFIFNANSAIEGIIFFNLAKSWPQLIEKWSRVEMALDNWKND 305
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 25.4 bits (53), Expect = 0.61
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = -3
Query: 587 SNILYILCQSRKSISSLLCILEPNLNVQVCMSLG 486
S+ LYILC+ ++S++ + +VQ+ +S+G
Sbjct: 227 SDNLYILCRLHYKLTSVMQKINSAFSVQLLVSIG 260
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 25.4 bits (53), Expect = 0.61
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = -3
Query: 587 SNILYILCQSRKSISSLLCILEPNLNVQVCMSLG 486
S+ LYILC+ ++S++ + +VQ+ +S+G
Sbjct: 227 SDNLYILCRLHYKLTSVMQKINSAFSVQLLVSIG 260
>AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein
protein.
Length = 203
Score = 25.0 bits (52), Expect = 0.81
Identities = 19/73 (26%), Positives = 29/73 (39%)
Frame = -3
Query: 233 VDSDSRMLACLKCRVRLTTILESGGDSRSYVARSESIMRDSDVAFSHSAALAIAQVRRNG 54
V S+S CR I + ++ V+ + +DS AF+ +AQV
Sbjct: 56 VSSNSYTPKIKSCRPFKAYIKDPLTLAQGLVSTEMLLKKDSSEAFNEFRTKILAQVHGTN 115
Query: 53 NKNNISRRHFMTT 15
N N + R TT
Sbjct: 116 NGTNKNMRRLSTT 128
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 21.8 bits (44), Expect = 7.5
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -2
Query: 441 LYPG-DGAVIRYTGAESVVPGGGC 373
LY G DG+VI E VV G GC
Sbjct: 348 LYLGSDGSVILKNYKEMVVVGCGC 371
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.8 bits (44), Expect = 7.5
Identities = 10/23 (43%), Positives = 11/23 (47%), Gaps = 1/23 (4%)
Frame = -2
Query: 717 PXXC-PGAGLRKNIVEHXQXGXP 652
P C P GLR+ I H G P
Sbjct: 47 PGSCDPSVGLRQGIPPHHYGGPP 69
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,982
Number of Sequences: 336
Number of extensions: 4026
Number of successful extensions: 25
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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