Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_F02
         (1059 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030423-1|ABO52843.1|  506|Drosophila melanogaster IP17710p pro...    31   2.0  
BT023765-1|AAZ41773.1|  701|Drosophila melanogaster RE18252p pro...    31   2.0  
AE014134-2732|AAN10947.1|  701|Drosophila melanogaster CG5953-PB...    31   2.0  
AE014134-2731|AAF53541.2|  701|Drosophila melanogaster CG5953-PA...    31   2.0  

>BT030423-1|ABO52843.1|  506|Drosophila melanogaster IP17710p
           protein.
          Length = 506

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -2

Query: 932 FFXXXGGGGKXXGGGGXXXXXPPPPP 855
           +F     GG   GGGG     PPPPP
Sbjct: 308 YFHGQAAGGGGGGGGGVVGPAPPPPP 333


>BT023765-1|AAZ41773.1|  701|Drosophila melanogaster RE18252p
           protein.
          Length = 701

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -2

Query: 932 FFXXXGGGGKXXGGGGXXXXXPPPPP 855
           +F     GG   GGGG     PPPPP
Sbjct: 503 YFHGQAAGGGGGGGGGVVGPAPPPPP 528


>AE014134-2732|AAN10947.1|  701|Drosophila melanogaster CG5953-PB,
           isoform B protein.
          Length = 701

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -2

Query: 932 FFXXXGGGGKXXGGGGXXXXXPPPPP 855
           +F     GG   GGGG     PPPPP
Sbjct: 503 YFHGQAAGGGGGGGGGVVGPAPPPPP 528


>AE014134-2731|AAF53541.2|  701|Drosophila melanogaster CG5953-PA,
           isoform A protein.
          Length = 701

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -2

Query: 932 FFXXXGGGGKXXGGGGXXXXXPPPPP 855
           +F     GG   GGGG     PPPPP
Sbjct: 503 YFHGQAAGGGGGGGGGVVGPAPPPPP 528


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,224,738
Number of Sequences: 53049
Number of extensions: 887586
Number of successful extensions: 10107
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8058
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5433356964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)