Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_F02
(1059 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 34 0.20
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 32 0.60
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 32 0.79
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.8
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 30 2.4
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 29 4.2
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.6
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 29 5.6
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 7.4
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 33.9 bits (74), Expect = 0.20
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = -2
Query: 917 GGGGKXXGGGGXXXXXPPPPP 855
GGGG GGGG PPPPP
Sbjct: 25 GGGGYSGGGGGGGDAAPPPPP 45
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 917 GGGGKXXGGGGXXXXXPPPPP 855
GGG GGGG PPPPP
Sbjct: 26 GGGYSGGGGGGGDAAPPPPPP 46
Score = 30.7 bits (66), Expect = 1.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 917 GGGGKXXGGGGXXXXXPPPPP 855
GGGG GGGG PPPP
Sbjct: 24 GGGGGYSGGGGGGGDAAPPPP 44
Score = 28.7 bits (61), Expect = 7.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 856 GGGGGXXXXXPPPPXXFPPPP 918
GGGGG PPPP P P
Sbjct: 33 GGGGGDAAPPPPPPADAAPAP 53
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 32.3 bits (70), Expect = 0.60
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 917 GGGGKXXGGGGXXXXXPPPPP 855
GGGG GGG PPPPP
Sbjct: 197 GGGGSGGSGGGSGRFPPPPPP 217
Score = 31.5 bits (68), Expect = 1.0
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 917 GGGGKXXGGGGXXXXXPPPPP 855
GGGG G GG PPPPP
Sbjct: 196 GGGGGSGGSGGGSGRFPPPPP 216
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 31.9 bits (69), Expect = 0.79
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 856 GGGGGXXXXXPPPPXXFPPPP 918
GGGGG PPPP PPP
Sbjct: 24 GGGGGCGCGAPPPPPACAPPP 44
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 917 GGGGKXXGGGGXXXXXPPPPP 855
GGGG GGGG PPPP
Sbjct: 37 GGGGGCGGGGGCGGGCAPPPP 57
Score = 30.7 bits (66), Expect = 1.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 917 GGGGKXXGGGGXXXXXPPPPP 855
GGGG GGGG PPPP
Sbjct: 94 GGGGGCGGGGGCGGGCAPPPP 114
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 917 GGGGKXXGGGGXXXXXPPPPP 855
GGGG GGG PPPPP
Sbjct: 38 GGGGCGGGGGCGGGCAPPPPP 58
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 917 GGGGKXXGGGGXXXXXPPPPP 855
GGGG GGG PPPPP
Sbjct: 95 GGGGCGGGGGCGGGCAPPPPP 115
Score = 28.7 bits (61), Expect = 7.4
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 857 GGGGGXXXXXPPPPXFFPPXXXXKKKKXXXXXXGGGGGG 973
GGGGG PPP PP GGGGGG
Sbjct: 43 GGGGGCGGGCAPPP---PPPACGGGCGGGGGGCGGGGGG 78
Score = 28.3 bits (60), Expect = 9.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 971 PPPPPXXXXXXXFFFXXXGGGGKXXGGGG 885
PPPPP GGGG GGGG
Sbjct: 55 PPPPPACGGGCGGGGGGCGGGGGGCGGGG 83
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 917 GGGGKXXGGGGXXXXXPPPPP 855
GGGG GGG PPPPP
Sbjct: 50 GGGGGCGYGGGYGCGIPPPPP 70
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 917 GGGGKXXGGGGXXXXXPPPPP 855
GGGG GGG PPPPP
Sbjct: 51 GGGGCGYGGGYGCGIPPPPPP 71
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 4.2
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -3
Query: 973 PPPPPPXXXXXXFFFFXXXXGGEKXXGGGXXXXXPPPPP 857
PPPPPP G K GG PPPPP
Sbjct: 551 PPPPPPLPLD----LLKGAVAGLKSVPGGPPPPPPPPPP 585
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 913 GGEKXXGGGXXXXXPPPPPP 854
GGE GG PPPPPP
Sbjct: 24 GGEAGYSGGAGVEAPPPPPP 43
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -2
Query: 917 GGGGKXXGGGGXXXXXPPPPP 855
GGGG+ GG PPPPP
Sbjct: 22 GGGGEAGYSGGAGVEAPPPPP 42
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 29.1 bits (62), Expect = 5.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 886 PPPPXXFPPPPXXXKKK 936
PPPP PPPP +KK
Sbjct: 817 PPPPPPLPPPPPSVEKK 833
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 886 PPPPXXFPPPPXXXKKK 936
PPPP PPPP KKK
Sbjct: 818 PPPPPLPPPPPSVEKKK 834
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 5.6
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Frame = +1
Query: 856 GGGGGXXXXXPPPPXXFPPPPXXXKKK---XXXXXXXGGGGG 972
GGG PPPP PPPP GGGGG
Sbjct: 292 GGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGG 333
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 5.6
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Frame = +1
Query: 856 GGGGGXXXXXPPPPXXFPPPPXXXKKK---XXXXXXXGGGGG 972
GGG PPPP PPPP GGGGG
Sbjct: 292 GGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGGG 333
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 29.1 bits (62), Expect = 5.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 886 PPPPXXFPPPPXXXKKK 936
PPPP PPPP +KK
Sbjct: 817 PPPPPPLPPPPPSVEKK 833
Score = 29.1 bits (62), Expect = 5.6
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 886 PPPPXXFPPPPXXXKKK 936
PPPP PPPP KKK
Sbjct: 818 PPPPPLPPPPPSVEKKK 834
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.7 bits (61), Expect = 7.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 856 GGGGGXXXXXPPPPXXFPPPP 918
GGGGG P P PPPP
Sbjct: 24 GGGGGGGGCAPAAPACAPPPP 44
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,336,095
Number of Sequences: 27780
Number of extensions: 284237
Number of successful extensions: 3807
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2914
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2824804260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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