Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_E24
(919 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 45 7e-05
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 44 2e-04
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 43 3e-04
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 41 0.001
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) 41 0.002
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.002
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 39 0.007
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 38 0.009
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 37 0.020
SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10) 36 0.035
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.046
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 36 0.046
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 36 0.061
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 36 0.061
SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 35 0.11
SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07) 35 0.11
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 35 0.11
SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 35 0.11
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.19
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.19
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 33 0.32
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 33 0.43
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 32 0.56
SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11) 32 0.56
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07) 31 0.99
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 31 1.3
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 31 1.3
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06) 31 1.7
SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22) 31 1.7
SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92) 31 1.7
SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2) 30 2.3
SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8) 30 2.3
SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36) 30 3.0
SB_52012| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) 29 4.0
SB_4912| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_50413| Best HMM Match : GRP (HMM E-Value=0.15) 29 4.0
SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022) 29 5.3
SB_12895| Best HMM Match : C1_3 (HMM E-Value=0.03) 29 5.3
SB_25129| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-24) 29 7.0
SB_24760| Best HMM Match : PT (HMM E-Value=0.17) 29 7.0
SB_18327| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2e-05) 29 7.0
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_52728| Best HMM Match : Herpes_UL3 (HMM E-Value=1.7) 28 9.2
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 45.2 bits (102), Expect = 7e-05
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +2
Query: 260 MNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAGC 376
+ W++ LSWNA E+G +T V +RLW PD+VL N C
Sbjct: 77 VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYNNAC 116
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +2
Query: 122 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 286
+++ L Y +D+ P D + + L + LR ++ E E + ++ W D L
Sbjct: 453 LLNYLFQNYSKDARPVLNVDDPVQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHFLQ 512
Query: 287 WNAGEW-GCSTWLVSSERLWRPDVVLLN 367
WN ++ G + +++ +++W+PDV+L N
Sbjct: 513 WNPDDFSGIKSIIIAPDKVWKPDVLLFN 540
Score = 42.7 bits (96), Expect = 4e-04
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +2
Query: 122 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 286
++ LL Y +D+ P + + + L + LR ++ E + + I ++ W D L
Sbjct: 35 LLKYLLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLK 94
Query: 287 WNAGEWG-CSTWLVSSERLWRPDVVLLN 367
WN ++G + ++ +R+W+PDV+L N
Sbjct: 95 WNPDDFGGIKSINIAPDRVWKPDVLLYN 122
Score = 32.3 bits (70), Expect = 0.56
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 411 VSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHN 539
V+++GS +W+ I + + + +P D+Q+C FGS H+
Sbjct: 143 VNHDGSTTWLAPAIIKSECKIDVRFFPFDVQSCELTFGSWTHD 185
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 43.2 bits (97), Expect = 3e-04
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Frame = +2
Query: 134 LLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 298
L TY++D P D + V L L L ++ + T+ + ++ W D RL WN
Sbjct: 20 LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79
Query: 299 EW-GCSTWLVSSERLWRPDVVLLN 367
+ G ++ + RLW PD+ L N
Sbjct: 80 AYDGVDNIVIKASRLWLPDITLYN 103
>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
Length = 240
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +3
Query: 411 VSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHNSD 545
V N G W + + SM L WP D QTC KFGS + S+
Sbjct: 181 VENTGKCVWSGPVTFTFTCSMALSRWPFDQQTCAMKFGSLSYGSN 225
>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
Length = 79
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +2
Query: 233 TVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 367
T+R+Q ++ W D +L W+ ++G +V ER +W PDVVLLN
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +2
Query: 233 TVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 367
T+R+Q ++ W D +L W+ ++G +V ER +W PDVVLLN
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 411 VSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGS 527
V +NG V W+ + + + M + ++P D Q C KF S
Sbjct: 97 VESNGVVRWLAPVVLKSRCKMDVRSYPFDEQYCGLKFAS 135
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 38.7 bits (86), Expect = 0.007
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 370
+ + W + LSWNA E+ G S VS +R W PD++L N+
Sbjct: 21 IAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNS 60
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3
Query: 393 YALRARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHNSDQNGXVID 566
Y + + +NG SW+ + + +P D Q CT +FGS ++ Q ID
Sbjct: 80 YKTQIEIRSNGYNSWLSPAMFKSTCDVNTRYFPFDDQHCTLEFGSWAFDASQLDLQID 137
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 38.3 bits (85), Expect = 0.009
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +2
Query: 188 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL 364
LTL+ H ++E ++ L+ W D RL+WN E+ G + S+ +W PD+ +L
Sbjct: 22 LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80
Query: 365 NA 370
N+
Sbjct: 81 NS 82
Score = 34.3 bits (75), Expect = 0.14
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 399 LRARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGS 527
+R +++ G V W+ L + T M + ++P D Q C +FGS
Sbjct: 94 IRLFINSAGEVLWMNPLILHTSCGMDIAHFPFDNQACELRFGS 136
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 37.1 bits (82), Expect = 0.020
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +2
Query: 98 ENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIR---ESESTVRIQADLQM 262
++ L L+ D Y+++ P D + V + + + + E + + ++M
Sbjct: 27 QDDNELRLIKDLFFRGYNKNVRPVEDKSMPVEVKFGIAYTQVVDLIEKDQVLISNIWVRM 86
Query: 263 NWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 367
NW + L WNA E+G L +S +W PD+VL N
Sbjct: 87 NWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122
>SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10)
Length = 384
Score = 36.3 bits (80), Expect = 0.035
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +3
Query: 402 RARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHNSDQNGXVIDKR 572
R R++++G W + T ++ + ++P D Q C FGS H+ ++ + D++
Sbjct: 52 RVRITSSGMTYWSMPFVVVTLCTINVSDFPFDTQQCKLTFGSWQHDGNEINLINDRK 108
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 35.9 bits (79), Expect = 0.046
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = +3
Query: 393 YALRARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGS 527
+ + + ++G+V W+ + + + + + N+P D Q C +FGS
Sbjct: 266 FTTKVNIHSDGTVQWLSPIQVKSECKIDITNFPLDEQFCKLEFGS 310
Score = 33.1 bits (72), Expect = 0.32
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 206 HANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 367
H + + TV L W D L+WN ++ G + V +W PD+VL N
Sbjct: 199 HQQLMGAPVTVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYN 253
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 35.9 bits (79), Expect = 0.046
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 221 ESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 367
E +++ ++ W + LSWNA E+ G S + ++LW+PD+ L N
Sbjct: 104 EKYELLKLSLYVRQIWKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYN 153
Score = 34.7 bits (76), Expect = 0.11
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 393 YALRARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGS 527
+ + +VS+ G W+ ++T + + +P D Q+CT KFGS
Sbjct: 166 FKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLKFGS 210
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 35.5 bits (78), Expect = 0.061
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 411 VSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHN 539
+S++GS +W+ I T + + +P D+Q C KFGS H+
Sbjct: 85 LSSDGSAAWLSPAIIKTECKVDVRLFPFDVQYCDLKFGSWTHD 127
Score = 31.5 bits (68), Expect = 0.99
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 367
+++ W D L+WN ++G + V +W+PD++L N
Sbjct: 26 IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYN 64
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 35.5 bits (78), Expect = 0.061
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 367
+ + W D RL WN ++G +++ S +LW PD+ L N
Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYN 314
>SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 319
Score = 34.7 bits (76), Expect = 0.11
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 411 VSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGS 527
V+N G V W + S+++ WP D+Q C+ FGS
Sbjct: 21 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGS 59
>SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07)
Length = 134
Score = 34.7 bits (76), Expect = 0.11
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 393 YALRARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGS 527
+ + +VS+ G W+ ++T + + +P D Q+CT KFGS
Sbjct: 13 FKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLKFGS 57
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 34.7 bits (76), Expect = 0.11
Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 197 HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 367
HLR + V + ++ W + L+WN ++ G + ++ ++W PD++L N
Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYN 163
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +3
Query: 393 YALRARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGS 527
Y S++G+ W ++ ++ + +P D Q C+ KFGS
Sbjct: 176 YKTSVIASSDGTQEWNSPASFTSTCNINVRYFPFDSQNCSLKFGS 220
>SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 400
Score = 34.7 bits (76), Expect = 0.11
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 411 VSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGS 527
V+N G V W + S+++ WP D+Q C+ FGS
Sbjct: 102 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGS 140
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 33.9 bits (74), Expect = 0.19
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +3
Query: 411 VSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHNSDQNGXVID 566
V +G V WI + ++ ++++ WP D Q CT F S + + +D
Sbjct: 458 VRQSGKVDWIAQASFTSTCNLRVRFWPMDDQFCTLTFSSWTYTESEIALKMD 509
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 266 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAG 373
W D L W+ ++ S + +W PDV L+N G
Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLINNG 439
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 33.9 bits (74), Expect = 0.19
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 402 RARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHNSDQ 548
RA + +NG W +I + ++ + +P D Q C KFGS ++ Q
Sbjct: 118 RATIMHNGYTEWFAPTEIHSICAIDITYFPFDEQFCKMKFGSWSYSGRQ 166
Score = 30.3 bits (65), Expect = 2.3
Identities = 11/37 (29%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 361
+ + W++ L+W+ +G T + V+ +W+PD+VL
Sbjct: 64 INLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVL 100
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 33.5 bits (73), Expect = 0.24
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 215 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 367
+ E L+M W D L WN ++G T + + + +W P V++ N
Sbjct: 534 VEEKNMVFTTNVRLRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYN 585
>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
Length = 191
Score = 33.1 bits (72), Expect = 0.32
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 173 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 349
K +V LH + A + S S VR+ +++ W + L WN ++ G T V+ +W P
Sbjct: 69 KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126
Query: 350 DVVLLN 367
D+VL N
Sbjct: 127 DIVLYN 132
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 32.7 bits (71), Expect = 0.43
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 393 YALRARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGS 527
Y +S +GS +W + + + +P D QTC KFGS
Sbjct: 96 YKTHVIISKDGSSAWFSPASFRSTCKIDVTYFPFDEQTCYMKFGS 140
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 32.3 bits (70), Expect = 0.56
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +3
Query: 390 DYALRARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGS 527
++ R VS++G W+ + S+ ++++ +P D Q C+ KFGS
Sbjct: 86 NFKTRIIVSSDGKNMWLAPVIFSSSCTIKIKYFPFDDQYCSLKFGS 131
>SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11)
Length = 269
Score = 32.3 bits (70), Expect = 0.56
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 402 RARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHNSDQ 548
+A V +NG W +I + + + +P D Q C KFGS + Q
Sbjct: 21 KATVKHNGYTEWFAPTEIHSICKIDITFFPFDEQFCKLKFGSWTYTGRQ 69
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 31.5 bits (68), Expect = 0.99
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 236 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 367
V + + + W + L+W+ +G T + V R+WRPD++L N
Sbjct: 69 VSLHQIIDLKWNNPLLTWDPTHFGNLTSINVDPLRVWRPDLILYN 113
>SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07)
Length = 301
Score = 31.5 bits (68), Expect = 0.99
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +3
Query: 408 RVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFG--SRMHNSDQNGXVID 566
R+ NG++ + RL +++ M L N+P D Q C K S+ + Q+G V++
Sbjct: 64 RIFPNGTLLYSMRLKVTSQCPMDLRNFPMDSQKCRLKMEAFSKWLYARQSGKVLN 118
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/51 (23%), Positives = 28/51 (54%)
Frame = +3
Query: 393 YALRARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHNSD 545
+ + +V+ +G+ +W+ +T + + +P D Q C KFGS ++++
Sbjct: 95 FTAKIKVNYSGTNTWLAPKIFTTSCKINVKYFPFDQQECRLKFGSWTYDAN 145
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 367
+ + W + ++WN E+G + + LW+PD+ L N
Sbjct: 44 MDVKWENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYN 82
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 257 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAGCNHRRG 391
+ W D L W+ + G T + V LW+PD+VL N + RG
Sbjct: 88 RQTWTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYNNVNDEDRG 133
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +3
Query: 411 VSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHN 539
+ + G + W + T + + +P D QTC FGS +N
Sbjct: 144 IYSTGDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGSWTYN 186
>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 408 RVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHNSDQ 548
RV NG+V++ R+ + M+ N+P D Q+C S D+
Sbjct: 165 RVYPNGNVTFSTRISATLSCKMEFRNFPMDRQSCPVTISSYFFPEDE 211
>SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06)
Length = 147
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +3
Query: 411 VSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHNSDQ 548
V G V W+ ++ +++ WP D Q CT F S ++ +
Sbjct: 57 VWQGGKVEWVAPASFTSDCKLRVRYWPIDDQFCTLTFSSWTYDDQE 102
>SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22)
Length = 636
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 390 DYALRARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGS 527
D R + +G + + + + I M L ++P D Q C KFGS
Sbjct: 317 DVNSRLSIDPDGKIFYSRGVSIVASCEMDLHDFPLDTQNCYLKFGS 362
>SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)
Length = 88
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 266 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVL 361
W + L+WN E+G T VS +W PD+VL
Sbjct: 53 WYNPLLTWNVTEYGGLKTINVSPTIIWLPDIVL 85
>SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2)
Length = 75
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +3
Query: 411 VSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHN 539
+ + G + W + T + + +P D QTC FGS +N
Sbjct: 19 IYSTGDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGSWTYN 61
>SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 375 ATTAGDYALRARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHN 539
A T + + ++ N+G W I + ++ + +P D Q C KFGS +N
Sbjct: 8 AGTLYQFKTKVQLFNDGLCVWYAPTIIQSGCNIDITYFPFDDQLCELKFGSWTYN 62
>SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)
Length = 156
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 266 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 367
W ++ L+W+ E+G ST V+ +++W PD+ L N
Sbjct: 2 WRNEYLTWDPKEFGGISTINVNVDKVWVPDIYLYN 36
>SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36)
Length = 592
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 417 NNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHN 539
+NG+ W + + +++ +P D QTC KFGS H+
Sbjct: 207 SNGTNKWRSPALLKSICKIKVKFFPFDSQTCKLKFGSFSHD 247
>SB_52012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1143
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -3
Query: 419 IRYTGAESVVPGGGCS--PRLAVPRQASTSVPRTPAKCCSPTPLRSNSVVCRSNS 261
+R ++ V P G CS P++ + + PRT A+ P S S VC+S S
Sbjct: 304 LRREKSDLVSPRGACSRLPQIVKRENSDLTRPRTKAQVTQNIPTVSPSRVCKSPS 358
>SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 420 NGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGS 527
+GS+ + + I M L ++P D QTC FGS
Sbjct: 48 DGSIFYSRSAHIVASCEMDLRDFPMDTQTCNLVFGS 83
>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
Length = 428
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 203 RHANIRESEST-VRIQADLQMNWIDKRLSWNAG-EWGCSTWLVSSERLWRPDVVLLN 367
R+++ ++S++ + + W D L WN G V +W PD+ L+N
Sbjct: 10 RYSSCQDSKAQELTTNLRIYQEWKDPNLKWNKSIAQGVEEIFVDPSDIWTPDIALMN 66
>SB_4912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1
Query: 238 HGGLGLTNVSMSQMQGQVDYDFGVGGGV 155
HG LG S+S + G+++ D+GVGGGV
Sbjct: 91 HGHLG----SVSMIMGKMNNDYGVGGGV 114
>SB_50413| Best HMM Match : GRP (HMM E-Value=0.15)
Length = 487
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1
Query: 238 HGGLGLTNVSMSQMQGQVDYDFGVGGGV 155
HG LG S+S + G+++ D+GVGGGV
Sbjct: 358 HGHLG----SVSMIMGKMNNDYGVGGGV 381
>SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 420 NGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGS 527
+GS+ + + I M L ++P D QTC FGS
Sbjct: 175 DGSIFYSRSAHIVASCEMDLRDFPMDTQTCNLVFGS 210
>SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022)
Length = 91
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +3
Query: 357 YC*TRAATTAGDYALRARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGS 527
Y ++T + + G V + +R+ + M L N+P D Q+C+ F S
Sbjct: 34 YINNEKSSTVPENQFLLTIDPEGRVVYSQRMTVVASCMMYLRNYPMDTQSCSISFES 90
>SB_12895| Best HMM Match : C1_3 (HMM E-Value=0.03)
Length = 1832
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 462 PVSMQLDNWPNDMQTCTFKFGSRMHNSDQNGXVIDKRIXSXXRV 593
PVS+ N +CT GS HN +Q+G ++ +R S V
Sbjct: 970 PVSLYSSNTGKTPDSCTELKGSDKHNEEQSGRMLAERDLSPFSV 1013
>SB_25129| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-24)
Length = 540
Score = 28.7 bits (61), Expect = 7.0
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +1
Query: 97 RKRNITVPHDRLAPRNVRSGLPPRLQNRSQPDPAFETC*HS*VRVHRANTGRSSNELDRQ 276
R+ N H R A + SG P R SQ T HS VR R N G S+ DR+
Sbjct: 425 RQTNPARNHHRSASVSNMSGPPRRGTGASQVGRP-RTSTHSDVRESRDNPGMKSDSRDRE 483
Query: 277 TTELE 291
+ + E
Sbjct: 484 SRDSE 488
>SB_24760| Best HMM Match : PT (HMM E-Value=0.17)
Length = 422
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = -3
Query: 656 PPHXPGLXHXTGQNPPTSHGPDXXXTXYSFVNHXSILVTIVHPRTELERASLH 498
P H PG G P SHGP + VN + ++H + +A H
Sbjct: 80 PSHGPGPHPSHGPGPHPSHGPGPHPSSGPGVNWFGRFLRLLHNSVKTVKADEH 132
>SB_18327| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2e-05)
Length = 109
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +3
Query: 417 NNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHNSD 545
N G++ W + + + + +P D Q C+ FGS + S+
Sbjct: 12 NTGAIEWYAPTLVKSICKIDITYFPFDKQNCSLVFGSWTYTSE 54
>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 420 NGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHNS 542
NG V + + I+ M+L ++P D Q C K GS +++
Sbjct: 66 NGDVVYSRMTIITAECEMKLHDFPMDEQQCHLKLGSYSYST 106
>SB_52728| Best HMM Match : Herpes_UL3 (HMM E-Value=1.7)
Length = 398
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 377 CSPRLAVPRQASTSVPRTPAKCCSPTPLRSNSVVCRSN 264
CSPR ++PR +S+PR+P PT R + C S+
Sbjct: 235 CSPRTSIPR---SSIPRSPIHV--PTSERELTSACESD 267
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/44 (25%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 239 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 367
+++ + + W + L+W+ ++G + V+ E +W PD+V+ N
Sbjct: 1463 KLKQIVDLQWENPILTWDPRDYGGVQEINVAPEEVWVPDIVIYN 1506
>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -1
Query: 223 LTNVSMSQMQGQVDYDFGVGGGVPIVRCEERVDHE 119
L+++S +G VD FGV +R +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,707,577
Number of Sequences: 59808
Number of extensions: 510064
Number of successful extensions: 1557
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1539
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2657535823
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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