Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_E24
(919 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 44 6e-06
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 44 6e-06
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 43 1e-05
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 43 1e-05
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 42 2e-05
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 42 3e-05
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 42 3e-05
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 40 1e-04
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 40 1e-04
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 38 4e-04
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 38 6e-04
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 38 6e-04
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 27 1.1
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 25 4.2
AY578795-1|AAT07300.1| 441|Anopheles gambiae Gbb-60A2 protein. 24 7.4
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 24 7.4
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 44.0 bits (99), Expect = 6e-06
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +2
Query: 134 LLATYD---RDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW 304
LL YD R S + V + + H I E +ST+ + ++ +W D +L+WN +
Sbjct: 46 LLKGYDPSIRPSQHYNVTTVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASY 105
Query: 305 G-CSTWLVSSERLWRPDVVLLN 367
G + +WRPDVVL N
Sbjct: 106 GNLNVVRWDPTIVWRPDVVLYN 127
Score = 28.7 bits (61), Expect = 0.26
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +3
Query: 411 VSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGS 527
V + G V W+ + + + WP D Q C K GS
Sbjct: 144 VYSEGKVLWVPPTEYHAFCELNMRLWPFDYQKCIVKIGS 182
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 44.0 bits (99), Expect = 6e-06
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Frame = +2
Query: 122 MIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKR 280
+ D LL+ Y+R P S ++V L L L N+++ T I L+ W D +
Sbjct: 39 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNIW--LEHEWQDHK 96
Query: 281 LSWNAGEWGCSTWL-VSSERLWRPDVVLLN 367
W+ E+G T L V SE +W PD+VL N
Sbjct: 97 FKWDPAEYGGVTELYVPSEHIWLPDIVLYN 126
Score = 29.5 bits (63), Expect = 0.15
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +3
Query: 402 RARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHNSDQ 548
+A + G V W + + + +P D QTC KFGS ++ +Q
Sbjct: 139 KAILHYTGKVIWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGNQ 187
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 42.7 bits (96), Expect = 1e-05
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Frame = +2
Query: 59 FLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESES 232
+LL+ + A N + L D LL+ Y++ P ++ V+ + + L+ + + +
Sbjct: 11 WLLSALVVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNL 69
Query: 233 TVRIQAD---LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAGCNH 382
+I ++ +W D +L W E+G L V S+ +WRPD+VL N H
Sbjct: 70 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWRPDIVLYNNADGH 123
Score = 35.5 bits (78), Expect = 0.002
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 402 RARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGS 527
+A V NNG V W + S+ ++ +P D+QTC K GS
Sbjct: 131 KATVYNNGMVIWQPPAVYKSSCSIDVEYFPYDVQTCVLKLGS 172
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 42.7 bits (96), Expect = 1e-05
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Frame = +2
Query: 122 MIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRESESTVRIQADLQMNWIDKR 280
+ D LL+ Y+R P ++ V + L L N++ T + ++ W D +
Sbjct: 27 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 84
Query: 281 LSWNAGEWG-CSTWLVSSERLWRPDVVLLN 367
L WN ++G T V SE +W PD+VL N
Sbjct: 85 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYN 114
Score = 27.1 bits (57), Expect = 0.80
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 402 RARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGS 527
+A + + G V W + + ++ +P D QTC KFGS
Sbjct: 127 KAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 168
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 42.3 bits (95), Expect = 2e-05
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Frame = +2
Query: 122 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 286
++++LLATY+ P + V L L+ ++ E + A L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 86
Query: 287 WNAGEWGCSTWL-VSSERLWRPDVVLLNA 370
WN E+G L ++ +LW+PDV++ N+
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLMYNS 115
Score = 30.7 bits (66), Expect = 0.065
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +3
Query: 387 GDYALRARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHNSDQNGXVID 566
G Y V NNGS ++ + + + +P D Q C KFGS ++ +Q +++
Sbjct: 122 GTYHTNIVVKNNGSCLYVPPGIFKSTCKIDITWFPFDDQHCEMKFGSWTYDGNQLDLILN 181
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 41.5 bits (93), Expect = 3e-05
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Frame = +2
Query: 59 FLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESES 232
+LL+ + A N + L D LL+ Y++ P ++ V+ + + L+ + + +
Sbjct: 11 WLLSALVVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNL 69
Query: 233 TVRIQAD---LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 367
+I ++ +W D +L W E+G L V S+ +WRPD+VL N
Sbjct: 70 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWRPDIVLYN 118
Score = 31.5 bits (68), Expect = 0.037
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 396 ALRARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGS 527
A +A + + G V W + + ++ +P D QTC KFGS
Sbjct: 129 ATKATIYSEGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGS 172
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 41.5 bits (93), Expect = 3e-05
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Frame = +2
Query: 80 ASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTV 238
A + C + D LL+ Y++ P + LT+ ++ N++ T
Sbjct: 13 AVVSVCGGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTT 72
Query: 239 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 367
+ ++ W D +L W E+G L V S+ +WRPD+VL N
Sbjct: 73 NLW--VEQTWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYN 114
Score = 31.5 bits (68), Expect = 0.037
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 396 ALRARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHNSDQ 548
A +A ++ G V W + + ++ +P D QTC KFGS ++ Q
Sbjct: 125 ATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQ 175
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 39.5 bits (88), Expect = 1e-04
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Frame = +2
Query: 122 MIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQAD-----LQMNWIDKRLS 286
+ D LL+ Y+R P LT+ L + E ++R Q ++ W D +L
Sbjct: 33 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVSLRNQVMTTNLWVKQKWFDYKLR 92
Query: 287 WNAGEWGCSTWL-VSSERLWRPDVVLLN 367
W+ E+G L V SE++W PD+VL N
Sbjct: 93 WDPEEYGGVEMLYVPSEQIWLPDIVLYN 120
Score = 33.5 bits (73), Expect = 0.009
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 402 RARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHNSDQ 548
+A + G V W + M ++ +P D QTC KFGS +N Q
Sbjct: 133 KATLKYTGEVFWEPPAIYKSSCEMNVEYFPYDEQTCLMKFGSWTYNGAQ 181
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 39.5 bits (88), Expect = 1e-04
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Frame = +2
Query: 122 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 286
++++LLATY+ P + V L L+ ++ E + L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLR 86
Query: 287 WNAGEWGCSTWL-VSSERLWRPDVVLLNA 370
WN E+G L ++ +LW+PDV++ N+
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLMYNS 115
Score = 30.7 bits (66), Expect = 0.065
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +3
Query: 387 GDYALRARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHNSDQNGXVID 566
G Y V NNGS ++ + + + +P D Q C KFGS ++ +Q +++
Sbjct: 122 GTYHTNIVVKNNGSCLYVPPGIFKSTCKIDITWFPFDDQHCEMKFGSWTYDGNQLDLILN 181
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 37.9 bits (84), Expect = 4e-04
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 212 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 367
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL N
Sbjct: 65 NVNEKNQIMKSNVWLRLVWSDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFN 117
Score = 37.1 bits (82), Expect = 7e-04
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +3
Query: 393 YALRARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHNSDQ 548
Y + NG V W+ + ++ + +P D QTC KFGS N DQ
Sbjct: 127 YKSNVLIYPNGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQ 178
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 37.5 bits (83), Expect = 6e-04
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNA 370
L++ W D + WN+ E+G L + RLW+PDV++ N+
Sbjct: 59 LKLEWNDMNVRWNSSEYGGVRDLRIPPHRLWKPDVLMYNS 98
Score = 29.5 bits (63), Expect = 0.15
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +3
Query: 387 GDYALRARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHNSDQ 548
G Y V NNGS ++ + + + +P D Q C KFGS ++ Q
Sbjct: 105 GTYPTNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQ 158
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 37.5 bits (83), Expect = 6e-04
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNA 370
L++ W D L WN E+G L + R+W+PDV++ N+
Sbjct: 91 LKLEWNDMNLRWNTSEYGGVRDLRIPPHRIWKPDVLMYNS 130
Score = 29.5 bits (63), Expect = 0.15
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +3
Query: 387 GDYALRARVSNNGSVSWIKRLDISTPVSMQLDNWPNDMQTCTFKFGSRMHNSDQ 548
G Y V NNGS ++ + + + +P D Q C KFGS ++ Q
Sbjct: 137 GTYPTNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQ 190
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 26.6 bits (56), Expect = 1.1
Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -3
Query: 728 PQPXXPGRVLRXPXXGXFAXRXSXPP-HXPGLXHXTGQNPPTSHG 597
PQP PG + P R PP PG+ PP++ G
Sbjct: 209 PQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQG 253
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 24.6 bits (51), Expect = 4.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 232 HRANTGRSSNELDRQTTELERRGVGLQHLAGVLG 333
+R+N R++ + DR+ + GVG AGV G
Sbjct: 586 NRSNHHRTTEQADREASVCAAGGVGAAAAAGVGG 619
>AY578795-1|AAT07300.1| 441|Anopheles gambiae Gbb-60A2 protein.
Length = 441
Score = 23.8 bits (49), Expect = 7.4
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 329 RTPAKCCSPTPLRSNSVV 276
R P CC+PT L SV+
Sbjct: 400 RVPKPCCAPTKLNPISVL 417
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 23.8 bits (49), Expect = 7.4
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +2
Query: 683 PXXVPGGXXPXXXAGGAGAGXXRGXVXXPGSP 778
P PG P G G G V PG+P
Sbjct: 46 PPGAPGPVGPRGLTGHRGEKGNSGPVGPPGAP 77
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 815,697
Number of Sequences: 2352
Number of extensions: 16793
Number of successful extensions: 80
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99641691
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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