Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_E22
         (854 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...   243   1e-64
Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical pr...    29   5.6  
Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical pr...    29   5.6  
Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical pr...    29   5.6  
Z75544-2|CAC42316.1|  480|Caenorhabditis elegans Hypothetical pr...    28   9.7  
Z75544-1|CAA99881.1|  476|Caenorhabditis elegans Hypothetical pr...    28   9.7  

>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score =  243 bits (594), Expect = 1e-64
 Identities = 123/239 (51%), Positives = 152/239 (63%), Gaps = 2/239 (0%)
 Frame = +3

Query: 81  LESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXF--PAKDEQ 254
           +E+ +   L G  L+E  RI +GR       L+ SSI              +   A+ EQ
Sbjct: 11  VETALAEKLDGVSLDEVERILYGRPYRA---LEISSIAEKLAQDGDFQLSGYIVDAQKEQ 67

Query: 255 TRPPRIVKVGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPF 434
           TR PR+V+V  IQ+ I  PT   V EQ+ AI  +V  +I+ A   G N+I  QE W MPF
Sbjct: 68  TRAPRLVRVAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPF 127

Query: 435 AFCTREKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVSSILERDEKHSDILWNTAVVIS 614
           AFCTRE+ PW EFAES   GPTT FL +LA+K+ +VI+S ILERDE+  D++WNTAVVIS
Sbjct: 128 AFCTRERLPWTEFAESVYTGPTTQFLSKLAVKHDIVIISPILERDEEKDDVIWNTAVVIS 187

Query: 615 DTGNVIGKHRKNHIPXVGDFNESNYYMERYTGHPVFATXYGKIAVNIXFGRXXXLNWMM 791
            TG VIG+ RKNHIP VGDFNES YYME   GHPVF T YG+I +NI +GR    NWMM
Sbjct: 188 HTGRVIGRSRKNHIPRVGDFNESTYYMESTLGHPVFETKYGRIGINICYGRHHPQNWMM 246


>Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical
           protein C37A5.1 protein.
          Length = 512

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -2

Query: 643 RCFPITFPVSLMTTAVFQSMSECFSSLSNIEDT-ITIAYLMASSRRKVVV 497
           +C P+TF ++   T +       F+++  IE+T I IA L+  +   V++
Sbjct: 75  KCVPLTFMLAFFVTIIVDRWKNMFANIGFIENTAIAIATLVKGTEGDVLL 124


>Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical
           protein T21C9.3b protein.
          Length = 565

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 339 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 473
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical
           protein T21C9.3a protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 339 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 473
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical
           protein C34E7.3 protein.
          Length = 256

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = -2

Query: 517 SRRKVVVGPSSADSANSHHGCFSLVQNAKGIFHNSWKQMMLTPSWPATS 371
           SR K+    +S+   +  HG + +V+ AK  F + +++  +TPS P T+
Sbjct: 197 SRMKIRKDSNSSKKEDMEHGDWWIVRVAKMGFESCFQRRRITPSPPPTN 245


>Z75544-2|CAC42316.1|  480|Caenorhabditis elegans Hypothetical
           protein K02A11.1b protein.
          Length = 480

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +3

Query: 366 IIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLREL 521
           I+ +  Q G N++      NMP+  C  E+      +E A  G T +++ E+
Sbjct: 138 IVKILIQAGANLLAVNAEGNMPYDICDHEETLDVIESEMAARGITQSYIDEM 189


>Z75544-1|CAA99881.1|  476|Caenorhabditis elegans Hypothetical
           protein K02A11.1a protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +3

Query: 366 IIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLREL 521
           I+ +  Q G N++      NMP+  C  E+      +E A  G T +++ E+
Sbjct: 138 IVKILIQAGANLLAVNAEGNMPYDICDHEETLDVIESEMAARGITQSYIDEM 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,958,369
Number of Sequences: 27780
Number of extensions: 375350
Number of successful extensions: 1070
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)