Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_E10
(873 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 36 0.032
11_07_0007 - 27262229-27262638,27263252-27263312 34 0.13
09_02_0274 + 6611555-6611615,6612229-6612638 34 0.13
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 34 0.17
07_03_1747 + 29188568-29188715,29188793-29189541 31 1.6
02_04_0400 - 22608519-22608844,22609044-22609122 31 1.6
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129... 30 2.8
12_01_0524 - 4167867-4168445 29 3.7
03_05_0630 + 26260159-26260272,26260520-26260894 29 4.9
12_02_0299 - 17051570-17052474,17053542-17053755 29 6.4
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 29 6.4
09_04_0430 + 17502387-17503505 29 6.4
08_02_1553 + 27835320-27835364,27836853-27836966,27837062-278374... 29 6.4
07_03_0890 - 22332768-22333382 29 6.4
06_01_0486 - 3455030-3455770 29 6.4
02_04_0264 - 21393029-21393046,21394249-21394814,21395005-21395623 29 6.4
09_04_0190 - 15443764-15443838,15445360-15445458,15446396-154468... 28 8.5
08_01_0955 + 9478018-9478773 28 8.5
04_01_0530 - 6928528-6929500,6929514-6930964 28 8.5
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 28 8.5
03_06_0427 - 33857008-33857137,33857224-33857258,33857966-338580... 28 8.5
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 28 8.5
02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771,198... 28 8.5
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 28 8.5
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 28 8.5
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 36.3 bits (80), Expect = 0.032
Identities = 27/93 (29%), Positives = 32/93 (34%), Gaps = 2/93 (2%)
Frame = +2
Query: 593 PALSXAGAXPRPWPRWNLPVAMFXXVF--PXXPXPGPPPXXAGPXFAVVXXPPXSPPAXX 766
P+ S A P P P P + F P P P PPP +A PP PP
Sbjct: 535 PSPSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPL 594
Query: 767 XXCXLXTXXPXXPXXXXLFLXXXSXPPXXXXGP 865
C + + P P L S PP P
Sbjct: 595 PNCLVPSPPPPPPPPP--ILPNRSVPPPPPPPP 625
>11_07_0007 - 27262229-27262638,27263252-27263312
Length = 156
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = -3
Query: 796 GXXGXQXAGGXXSRGXGXXXXHHGEXGAGXXRGGARXGXSGKDXXEHXHG 647
G G GG RG G HG GAG GG R G H HG
Sbjct: 101 GGAGGSHRGGGGGRGGGLSGRGHGSGGAGGSSGGGRRSLPG-----HGHG 145
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -3
Query: 796 GXXGXQXAGGXXSRGXGXXXXHHGEXGAGXXRGGARXG 683
G G +GG + G G HG AG RGG G
Sbjct: 68 GIPGGGQSGGIGAPGGGCGGAGHGGGSAGGGRGGGAGG 105
>09_02_0274 + 6611555-6611615,6612229-6612638
Length = 156
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = -3
Query: 796 GXXGXQXAGGXXSRGXGXXXXHHGEXGAGXXRGGARXGXSGKDXXEHXHG 647
G G GG RG G HG GAG GG R G H HG
Sbjct: 101 GGAGGSHRGGGGGRGGGLSGRGHGSGGAGGSSGGGRRSLPG-----HGHG 145
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -3
Query: 796 GXXGXQXAGGXXSRGXGXXXXHHGEXGAGXXRGGARXG 683
G G +GG + G G HG AG RGG G
Sbjct: 68 GIPGGGQSGGIGAPGGGCGGAGHGGGSAGGGRGGGAGG 105
>05_03_0366 -
13102147-13102281,13102560-13102739,13102791-13102992,
13104385-13104575
Length = 235
Score = 33.9 bits (74), Expect = 0.17
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -1
Query: 309 HQPSAAAPLPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQM-QGQVDYDFGVGG 145
H P AAA P VP++ P L + S GG GL S S + G + D G+GG
Sbjct: 7 HSPRAAAAAPSVPSR-LPRPFLLSLSSPSRGGSGLVAASASAVAAGGSEGDGGIGG 61
>07_03_1747 + 29188568-29188715,29188793-29189541
Length = 298
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +2
Query: 362 PPPGTTLSAPVYLITAPSPG*SAWTLALQFLCS*TIGPTTCRLARSSSVLG 514
PPP TT++ V L TA + S + QF+C+ TTC + S S+ G
Sbjct: 213 PPPTTTMAQHVVLPTAAA---SCHQMQDQFVCARAAETTTCCWSESESLPG 260
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -3
Query: 796 GXXGXQXAGGXXSRGXGXXXXHHGEXGAGXXRGGARXGXSGKDXXEHXHGEVPPW 632
G G GG G G G G G GG G G G PPW
Sbjct: 43 GGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGYYPPW 97
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 796 GXXGXQXAGGXXSRGXGXXXXHHGEXGAGXXRGGARXGXSGKDXXEHXHGEVPPWP 629
G G GG RG G G G G GG G G G PP P
Sbjct: 51 GGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGYYPPWNGGYYPPGP 106
>10_08_0630 -
19410852-19411235,19411370-19412257,19412440-19412941,
19413662-19414135,19414982-19415040,19415468-19415629
Length = 822
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 683 PXPGPPPXXAGPXFAVVXXPPXSPPA 760
P P PPP P +V PP PPA
Sbjct: 429 PQPPPPPSHPTPITSVAPAPPPPPPA 454
>12_01_0524 - 4167867-4168445
Length = 192
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = -1
Query: 306 QPSAAAPLPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVPIVR 127
QPS+AA P + + + + YSH G + S + G + G GGG P V
Sbjct: 104 QPSSAAVAPLPSSTNLKSAVRSAMGSYSHSGTRRVHFGDSTVLG--EKAAGAGGGEPAV- 160
Query: 126 CEERVDHEGQ*C 91
EE + E + C
Sbjct: 161 VEEVEEEEEKEC 172
>03_05_0630 + 26260159-26260272,26260520-26260894
Length = 162
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -3
Query: 796 GXXGXQXAGGXXSRGXGXXXXHHGEXGAGXXRGGARXGXSG 674
G G + GG G G G G G GG R G G
Sbjct: 102 GYGGGRGGGGYGGGGGGGYGRREGGYGGGGGYGGGRGGGGG 142
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = +2
Query: 626 PWPRWNLPVAMFXXVFPXXPX--PGPPPXXAGPXFAVVXXPPXSPP 757
PWP +P FP P P PPP P + P SPP
Sbjct: 211 PWPWPPIPFCTPRPWFPPIPFLTPPPPPFLPFPLPPIPFLTPPSPP 256
>11_06_0411 -
23230580-23230795,23231407-23231862,23232142-23232195,
23232251-23232367
Length = 280
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 207 VRVHRANTGRSSNELDRQTTELERRGVGLQHLAGVLGTL 323
V+ H R S EL+RQ ELER+G L+ G L +
Sbjct: 89 VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127
>09_04_0430 + 17502387-17503505
Length = 372
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 683 PXPGPPPXXAGPXFAVVXXPPXSPP 757
P P PPP P A + PP +PP
Sbjct: 166 PQPQPPPQPTPPRAAPLPTPPRAPP 190
>08_02_1553 +
27835320-27835364,27836853-27836966,27837062-27837457,
27837751-27837822,27837957-27838082,27838164-27838244,
27838364-27838558,27839018-27840013
Length = 674
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 683 PXPGPPPXXAGPXFAVVXXPPXSPPA 760
P P PPP A P A+ PP PPA
Sbjct: 492 PRP-PPPVNAAPEAAIPRPPPPVPPA 516
>07_03_0890 - 22332768-22333382
Length = 204
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 674 PXXPXPGPPPXXAGPXFAVVXXPPXSPPA 760
P P P PPP A P A PP P A
Sbjct: 84 PPPPPPPPPPERAVPEAADTPPPPPPPTA 112
>06_01_0486 - 3455030-3455770
Length = 246
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/52 (34%), Positives = 20/52 (38%)
Frame = -3
Query: 769 GXXSRGXGXXXXHHGEXGAGXXRGGARXGXSGKDXXEHXHGEVPPWPXSXXC 614
G S G G HHG+ GG G GK H H + PP P C
Sbjct: 31 GSGSSGGG----HHGKPPGSGSGGG---GHHGKPPEHHHHHKPPPSPRCPSC 75
>02_04_0264 - 21393029-21393046,21394249-21394814,21395005-21395623
Length = 400
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = -3
Query: 796 GXXGXQXAGGXXSRGXGXXXXHHGEXGA--GXXRGGARXGXSG 674
G G AG +RG HG GA G RGGA G G
Sbjct: 272 GGHGGAGAGAGGARGGAGAGGGHGGAGAGAGGGRGGAGAGAGG 314
>09_04_0190 -
15443764-15443838,15445360-15445458,15446396-15446891,
15449436-15449479,15449999-15450104,15450243-15450314,
15450474-15450588,15451182-15451407
Length = 410
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 213 VHRANTGRSSNELDRQTTELERRGVG 290
V+ A +SS+ L ++TTE++R G+G
Sbjct: 371 VNEAKETKSSSSLPQKTTEMQRSGIG 396
>08_01_0955 + 9478018-9478773
Length = 251
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -3
Query: 772 GGXXSRGXGXXXXHHGEX-GAGXXRGGARXGXSGKD 668
GG + G G HH E AG RGGA G D
Sbjct: 154 GGGGNNGEGCSKMHHHEIMAAGSCRGGADADGEGAD 189
>04_01_0530 - 6928528-6929500,6929514-6930964
Length = 807
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 42 VSPHLCYS*CGRMRKRNITVPHDRLAPRNVRSGLPPRLQNRSQPDPA 182
+SP+LCY+ C RK+ +L+ + SGLPP++ S+ + A
Sbjct: 475 LSPNLCYAFCITSRKKT------QLSQPSNNSGLPPKIFTYSELEKA 515
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/55 (32%), Positives = 22/55 (40%)
Frame = +2
Query: 593 PALSXAGAXPRPWPRWNLPVAMFXXVFPXXPXPGPPPXXAGPXFAVVXXPPXSPP 757
P+ + AG+ P P P P A P P PGPPP PP + P
Sbjct: 340 PSAAGAGSGPPPPPPPAAPAAPR----PPGPGPGPPPPPGAAGRGGGGPPPPALP 390
>03_06_0427 -
33857008-33857137,33857224-33857258,33857966-33858046,
33858213-33858338,33858410-33858568,33858797-33858934,
33859084-33859155,33859359-33860273
Length = 551
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = -3
Query: 796 GXXGXQXAGGXXSRGXGXXXXHHGEXGAGXXRGGARXGXSGKDXXEHXHGEV 641
G G GG G G G G G GG G G + E EV
Sbjct: 46 GGGGGSGGGGGGGGGGGGGGGSGGGCGGGGGGGGGSSGGGGSEVLERRVTEV 97
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 674 PXXPXPGPPPXXAGPXFAVVXXPPXSPP 757
P P P PPP P PP PP
Sbjct: 351 PPPPPPPPPPPPPPPKLNTAPKPPPPPP 378
>02_01_0296 +
1978565-1981197,1981216-1981639,1982280-1982771,
1982950-1983087
Length = 1228
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 391 GRGERSPRRWLQPRLAVPRQASTSVPRTP 305
GRG RS R L+P LA+ A + +P P
Sbjct: 442 GRGPRSTLRILRPGLAISEMARSMLPAEP 470
>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +2
Query: 683 PXPGPPPXXAGPXFA--VVXXPPXSPP 757
P P PPP A P F + PP SPP
Sbjct: 965 PPPPPPPNVAPPPFTRQDIPPPPPSPP 991
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 388 RGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSPTPLRSNS 266
R RSPRR P R + + R+PA S +P+R++S
Sbjct: 224 RDSRSPRRSASPPNGRNRSPTPNASRSPAPRDSRSPMRADS 264
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,711,291
Number of Sequences: 37544
Number of extensions: 555740
Number of successful extensions: 2603
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2447
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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