Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_E09
(851 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 54 1e-07
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 52 4e-07
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 51 1e-06
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 6e-06
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 44 2e-04
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 44 2e-04
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 41 0.001
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 40 0.002
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 40 0.003
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 39 0.004
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.006
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 39 0.006
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) 38 0.010
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 37 0.018
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 37 0.024
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 37 0.024
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 36 0.042
SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06) 36 0.055
SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022) 36 0.055
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 34 0.13
SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 32 0.51
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 30 2.1
SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15) 29 3.6
SB_4912| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_50413| Best HMM Match : GRP (HMM E-Value=0.15) 29 3.6
SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07) 29 3.6
SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 29 6.3
SB_25129| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-24) 29 6.3
SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 29 6.3
SB_24593| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 54.4 bits (125), Expect = 1e-07
Identities = 34/141 (24%), Positives = 69/141 (48%), Gaps = 12/141 (8%)
Frame = +2
Query: 134 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 298
++ LL Y +D+ P + + + L + LR ++ E + + I ++ W D L
Sbjct: 35 LLKYLLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLK 94
Query: 299 WNAGEWG-CSTWLVSSERLWRPGVVLLNAAATTAGDYALRARVSNN------GSVSWIKR 457
WN ++G + ++ +R+W+P V+L N A+T +L ++ N GS +W+
Sbjct: 95 WNPDDFGGIKSINIAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTNVIVNHDGSTTWLAP 154
Query: 458 LDISTPISMQLDNWPNDMQTC 520
I + + + +P D+Q+C
Sbjct: 155 AIIKSECKIDVRFFPFDVQSC 175
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 52.4 bits (120), Expect = 4e-07
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Frame = +2
Query: 200 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPGVVLL 376
LTL+ H ++E ++ L+ W D RL+WN E+G + S+ +W P + +L
Sbjct: 22 LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80
Query: 377 NAAATTAG--DYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQVRF 538
N+A + +R +++ G V W+ L + T M + ++P D Q C ++RF
Sbjct: 81 NSANKDMDLREKNIRLFINSAGEVLWMNPLILHTSCGMDIAHFPFDNQAC--ELRF 134
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 51.2 bits (117), Expect = 1e-06
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Frame = +2
Query: 233 ESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPGVVLLNAAATTAGD-- 403
E +++ ++ W + LSWNA E+G S + ++LW+P + L N A ++A
Sbjct: 104 EKYELLKLSLYVRQIWKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYNNADSSADGSL 163
Query: 404 YALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQ 529
Y +A+ VS+ G W+ ++T + + +P D Q+CT +
Sbjct: 164 YGFKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLK 207
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Frame = +2
Query: 245 TVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPGVVLLNAAATTAGDYALR- 415
T+R+Q ++ W D +L W+ ++G +V ER +W P VVLLN A ++ +
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNE 91
Query: 416 ---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 520
V +NG V W+ + + + M + ++P D Q C
Sbjct: 92 GNPVLVESNGVVRWLAPVVLKSRCKMDVRSYPFDEQYC 129
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 48.8 bits (111), Expect = 6e-06
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Frame = +2
Query: 218 HANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPGVVLLNAA-AT 391
H + + TV L W D L+WN ++G + V +W P +VL N +
Sbjct: 199 HQQLMGAPVTVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYNNVDSD 258
Query: 392 TAGD---YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQ 529
++G+ + + + ++G+V W+ + + + + + N+P D Q C +
Sbjct: 259 SSGEMYKFTTKVNIHSDGTVQWLSPIQVKSECKIDITNFPLDEQFCKLE 307
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 44.0 bits (99), Expect = 2e-04
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPGVVLLNAAATTAGDYALRARV------ 424
+++ W D L+WN ++G + V +W+P ++L N A+T +L ++
Sbjct: 26 IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVIL 85
Query: 425 SNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 520
S++GS +W+ I T + + +P D+Q C
Sbjct: 86 SSDGSAAWLSPAIIKTECKVDVRLFPFDVQYC 117
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/112 (22%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Frame = +2
Query: 209 HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPGVVLL-NA 382
HLR + V + ++ W + L+WN ++ G + ++ ++W P ++L NA
Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYNNA 165
Query: 383 AATTAG---DYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQ 529
T AG Y S++G+ W ++ ++ + +P D Q C+ +
Sbjct: 166 DETYAGGLEKYKTSVIASSDGTQEWNSPASFTSTCNINVRYFPFDSQNCSLK 217
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 42.7 bits (96), Expect = 4e-04
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Frame = +2
Query: 227 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPGVVLLNAAA----T 391
+ E L+M W D L WN ++G T + + + +W P V++ N A +
Sbjct: 534 VEEKNMVFTTNVRLRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYNQAGDLGES 593
Query: 392 TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 520
R V ++G+V W+ I + + + +P D Q C
Sbjct: 594 ITSSNTPRPVVRSDGTVLWMVPTVIKSSCVIDVKYFPFDQQLC 636
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Frame = +2
Query: 146 LLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 310
L TY++D P D + V L L L ++ + T+ + ++ W D RL WN
Sbjct: 20 LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79
Query: 311 EW-GCSTWLVSSERLWRPGVVLLNAA 385
+ G ++ + RLW P + L N A
Sbjct: 80 AYDGVDNIVIKASRLWLPDITLYNNA 105
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Frame = +2
Query: 278 WIDKRLSWNAGEWGCSTWLVSSERLWRPGVVLLNAA---ATTAGDYAL---RARVSNNGS 439
W D L W+ ++ S + +W P V L+N AG L V +G
Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLINNGDKLVHVAGGAELFNADTVVRQSGK 463
Query: 440 VSWIKRLDISTPISMQLDNWPNDMQTCT 523
V WI + ++ ++++ WP D Q CT
Sbjct: 464 VDWIAQASFTSTCNLRVRFWPMDDQFCT 491
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 272 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPGVVLLNAA 385
+ W++ LSWNA E+ G +T V +RLW P +VL N A
Sbjct: 77 VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYNNA 115
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 39.9 bits (89), Expect = 0.003
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 13/101 (12%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPGVVLLNAA--ATTAGD----------Y 406
+ + W + LSWNA E+ G S VS +R W P ++L N+ +A + Y
Sbjct: 21 IAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNSVRFVDSAEEDDRLGGGTEKY 80
Query: 407 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQ 529
+ + +NG SW+ + + +P D Q CT +
Sbjct: 81 KTQIEIRSNGYNSWLSPAMFKSTCDVNTRYFPFDDQHCTLE 121
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPGVVLLN--AAATTAGDYAL--RARVSN 430
+ + W++ L+W+ +G T + V+ +W+P +VL + T Y RA + +
Sbjct: 64 INLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVLYHNIGFGETGAIYKFDTRATIMH 123
Query: 431 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 520
NG W +I + ++ + +P D Q C
Sbjct: 124 NGYTEWFAPTEIHSICAIDITYFPFDEQFC 153
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Frame = +2
Query: 278 WIDKRLSWNAGEWGCSTWL-VSSERLWRPGVVLLNAA-ATTAG---DYALRARVSNNGSV 442
W + L WN +G + VS ++W P +VL N A A+T G ++ R VS++G
Sbjct: 40 WYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKN 99
Query: 443 SWIKRLDISTPISMQLDNWPNDMQTCTFQ 529
W+ + S+ ++++ +P D Q C+ +
Sbjct: 100 MWLAPVIFSSSCTIKIKYFPFDDQYCSLK 128
>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 38.7 bits (86), Expect = 0.006
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Frame = +2
Query: 164 RDSPPDS---KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTW 331
R S PD ++VV+L + + +++ ++ I L+ W D L +N +++
Sbjct: 68 RPSTPDGGPLQVVVDLVI-ISMSSLDDNNMEYTISFYLRQTWHDPLLRYNKSSLVNAASY 126
Query: 332 LVSS----ERLWRPGVVLLNAAATTAG--DYAL---RARVSNNGSVSWIKRLDISTPISM 484
+ +++W+P L N AG D +L RV NG+V++ R+ + M
Sbjct: 127 ATLNYALVDKIWKPDTYLENVKKIDAGSDDKSLVHKGFRVYPNGNVTFSTRISATLSCKM 186
Query: 485 QLDNWPNDMQTC 520
+ N+P D Q+C
Sbjct: 187 EFRNFPMDRQSC 198
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPGVVLLNAAATTAGD----YALRARVSN 430
+ + W ++ L+W+ + G T + ++ +W P +VL ++A + Y +S
Sbjct: 45 VNVRWDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKTHVIISK 104
Query: 431 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 520
+GS +W + + + +P D QTC
Sbjct: 105 DGSSAWFSPASFRSTCKIDVTYFPFDEQTC 134
>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
Length = 79
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 245 TVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPGVVLLN 379
T+R+Q ++ W D +L W+ ++G +V ER +W P VVLLN
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 37.1 bits (82), Expect = 0.018
Identities = 19/90 (21%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPGVVLLNAAAT----TAGDYALRARVSN 430
+ + W + ++WN E+G + + LW+P + L N A + + + + +V+
Sbjct: 44 MDVKWENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYNNADSGYDGSLYGFTAKIKVNY 103
Query: 431 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 520
+G+ +W+ +T + + +P D Q C
Sbjct: 104 SGTNTWLAPKIFTTSCKINVKYFPFDQQEC 133
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 36.7 bits (81), Expect = 0.024
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Frame = +2
Query: 269 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPGVVLLNAA--ATTAGDYALRARVS--NN 433
+ W D L W+ + G T + V LW+P +VL N Y +V +
Sbjct: 88 RQTWTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYNNVNDEDRGEQYLFNTKVIIYST 147
Query: 434 GSVSWIKRLDISTPISMQLDNWPNDMQTC 520
G + W + T + + +P D QTC
Sbjct: 148 GDIEWYSPNILKTHCKIDIQYFPFDTQTC 176
>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
Length = 240
Score = 36.7 bits (81), Expect = 0.024
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 7/94 (7%)
Frame = +2
Query: 269 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPGVVLLNAAATT---AGDYAL---RARVS 427
+ W + L W+ ++ + + +W P + LLN T AG ++ V
Sbjct: 123 ERTWRNPYLKWDKAKYQNRDRVHFDPKEIWVPDISLLNNGDNTVKMAGGRSIFLTNVVVE 182
Query: 428 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQ 529
N G W + + SM L WP D QTC +
Sbjct: 183 NTGKCVWSGPVTFTFTCSMALSRWPFDQQTCAMK 216
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 35.9 bits (79), Expect = 0.042
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +2
Query: 266 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPGVVLLNAAATT---AGDYALRARVSNN 433
+ + W D RL WN ++ G +++ S +LW P + L N A + V+++
Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYNNANDNYEKEKEEYYGLTVNSD 335
Query: 434 GSVSWIKRLDISTPISMQLDNWPNDMQ 514
GS+ W + ++ + +P D Q
Sbjct: 336 GSIGWYYPTIFKSSCTIDVTYFPFDDQ 362
>SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06)
Length = 147
Score = 35.5 bits (78), Expect = 0.055
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Frame = +2
Query: 278 WIDKRLSWNA-GEWGCSTWLVSSERLWRPGVVLLNAAATT---AGD---YALRARVSNNG 436
W D L W ++ + S + +W P V L+N A + AG + V G
Sbjct: 2 WNDVFLKWRGEAKYQVTKTRFSPQEIWVPDVALINNADKSVRLAGGPELFKTDLNVWQGG 61
Query: 437 SVSWIKRLDISTPISMQLDNWPNDMQTCT 523
V W+ ++ +++ WP D Q CT
Sbjct: 62 KVEWVAPASFTSDCKLRVRYWPIDDQFCT 90
>SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022)
Length = 91
Score = 35.5 bits (78), Expect = 0.055
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = +2
Query: 344 ERLWRPGVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 523
+++W+P + N ++T + + G V + +R+ + M L N+P D Q+C+
Sbjct: 26 KQIWKPDTYINNEKSSTVPENQFLLTIDPEGRVVYSQRMTVVASCMMYLRNYPMDTQSCS 85
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 34.3 bits (75), Expect = 0.13
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Frame = +2
Query: 110 ENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIR---ESESTVRIQADLQM 274
++ L L+ D Y+++ P D + V + + + + E + + ++M
Sbjct: 27 QDDNELRLIKDLFFRGYNKNVRPVEDKSMPVEVKFGIAYTQVVDLIEKDQVLISNIWVRM 86
Query: 275 NWIDKRLSWNAGEWGCSTWL-VSSERLWRPGVVLLN 379
NW + L WNA E+G L +S +W P +VL N
Sbjct: 87 NWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122
>SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 480
Score = 32.3 bits (70), Expect = 0.51
Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 4/134 (2%)
Frame = +2
Query: 134 MIDSLLATYDRDSPP---DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSW 301
++ +L YD+ S P + VN+++ ++ + I+ES + L+ W D RL+
Sbjct: 76 VLKRMLRKYDKYSRPYVGRRAVQVNISMAVQSFSQIKESNMEFEVFMYLRQEWNDPRLAH 135
Query: 302 NAGEWGCSTWLVSSERLWRPGVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPIS 481
S +W P NA + + NG + + R +
Sbjct: 136 GYRAL-LSLAKDRVNDIWLPDTYFNNANEYEVYIVNQLSLIKPNGDIYYSGRNKVKGACQ 194
Query: 482 MQLDNWPNDMQTCT 523
M L N+P D+Q C+
Sbjct: 195 MDLFNFPLDVQRCS 208
>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 31.5 bits (68), Expect = 0.90
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Frame = +2
Query: 278 WIDKRLSWNAGEWGCSTWLVSSE--RLWRPGVVLLNA--AATTAGDYALRARVS--NNGS 439
W D+RL A S L E ++WRP NA ++ TA D + + ++ NG
Sbjct: 12 WKDERL---ANRLNKSVVLKGDEITKMWRPDPFCYNARESSLTASDDDINSMMTIHPNGD 68
Query: 440 VSWIKRLDISTPISMQLDNWPNDMQTC 520
V + + I+ M+L ++P D Q C
Sbjct: 69 VVYSRMTIITAECEMKLHDFPMDEQQC 95
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = -1
Query: 461 PSALSRRRSRY*IHGRGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSPTPLRSNSVVCR 282
P + R +SR H R + R+ L+ + PR S+ T K SP+ R S R
Sbjct: 275 PPSEERPKSRLYRHSRSKSKERKTLKSPIRSPRGQSSRERNTKRKSKSPSLERRRSRARR 334
Query: 281 SNSFE 267
S S E
Sbjct: 335 SRSIE 339
>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
Length = 191
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 185 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 361
K +V LH + A + S S VR+ +++ W + L WN ++ G T V+ +W P
Sbjct: 69 KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126
Query: 362 GVVLLN 379
+VL N
Sbjct: 127 DIVLYN 132
>SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)
Length = 296
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Frame = +2
Query: 344 ERLWRPGVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 514
+ +W P NA D + NG V + RL I+ + L +P+D+Q
Sbjct: 32 DEIWIPSTYFFNAKKAYFHDVTTENYLLMIKPNGDVFYSVRLTITMACKLTLQMFPHDVQ 91
Query: 515 TC 520
C
Sbjct: 92 VC 93
>SB_4912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2
Query: 250 HGGLGLTNVSMSQMQGQVDYDFGVGGGV 167
HG LG S+S + G+++ D+GVGGGV
Sbjct: 91 HGHLG----SVSMIMGKMNNDYGVGGGV 114
>SB_50413| Best HMM Match : GRP (HMM E-Value=0.15)
Length = 487
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2
Query: 250 HGGLGLTNVSMSQMQGQVDYDFGVGGGV 167
HG LG S+S + G+++ D+GVGGGV
Sbjct: 358 HGHLG----SVSMIMGKMNNDYGVGGGV 381
>SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07)
Length = 301
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 419 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQV 532
R+ NG++ + RL +++ M L N+P D Q C ++
Sbjct: 64 RIFPNGTLLYSMRLKVTSQCPMDLRNFPMDSQKCRLKM 101
>SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 319
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 422 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 523
V+N G V W + S+++ WP D+Q C+
Sbjct: 21 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCS 54
>SB_25129| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-24)
Length = 540
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +1
Query: 109 RKRNITVPHDRLAPRNVRSGLPPRLQNRSQPDPAFETC*HS*VRVHRANTGRSSNELDRQ 288
R+ N H R A + SG P R SQ T HS VR R N G S+ DR+
Sbjct: 425 RQTNPARNHHRSASVSNMSGPPRRGTGASQVGRP-RTSTHSDVRESRDNPGMKSDSRDRE 483
Query: 289 TTELE 303
+ + E
Sbjct: 484 SRDSE 488
>SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 400
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 422 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 523
V+N G V W + S+++ WP D+Q C+
Sbjct: 102 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCS 135
>SB_24593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1453
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 305 AGEWGCSTWLVSSERLWRPG 364
AGE S WL E LWRPG
Sbjct: 987 AGELQDSRWLTGPEFLWRPG 1006
>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -2
Query: 235 LTNVSMSQMQGQVDYDFGVGGGVPIVRCEERVDHE 131
L+++S +G VD FGV +R +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,570,751
Number of Sequences: 59808
Number of extensions: 505964
Number of successful extensions: 1443
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1435
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2419355818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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