Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_E09
(851 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 58 1e-10
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 56 3e-10
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 52 7e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 50 4e-08
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 50 4e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 49 5e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 49 6e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 8e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 8e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 48 1e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 47 2e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 47 3e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 46 4e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 45 8e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 45 8e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 44 2e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 44 2e-06
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 41 1e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 39 5e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 36 6e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 34 0.001
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 34 0.001
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 34 0.001
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 30 0.024
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 29 0.054
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 2.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 3.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 3.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.7
U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein. 22 8.2
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 57.6 bits (133), Expect = 1e-10
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 7/146 (4%)
Frame = +2
Query: 113 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 280
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 281 IDKRLSWNAGEWGCSTWLVSSERLWRPGVVLLNAAAT---TAGDYALRARVSNNGSVSWI 451
+D+RL++ G+ + + R+W+P N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 452 KRLDISTPISMQLDNWPNDMQTCTFQ 529
RL I M L+N+P D Q C Q
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQ 147
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 56.4 bits (130), Expect = 3e-10
Identities = 45/153 (29%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Frame = +2
Query: 89 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 247
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 248 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPGVVLLNAAATTAGDYAL-RAR 421
+ L+ W D + W+ E+G T L V SE +W P +VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 422 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 520
+ G V W + + + +P D QTC
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTC 159
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 52.0 bits (119), Expect = 7e-09
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 9/150 (6%)
Frame = +2
Query: 107 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 265
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 266 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPGVVLLNAA-ATTAGDYALRARVSNNGS 439
++ +W D +L W+ E+G L V S+ +WRP +VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 440 VSWIKRLDISTPISMQLDNWPNDMQTCTFQ 529
V W + + ++ +P D QTC +
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMK 166
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 51.2 bits (117), Expect = 1e-08
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Frame = +2
Query: 107 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 271
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 272 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPGVVL--LNAAATTAGDYALRARVSNNGSV 442
+ W L+W + E+ ++ V S +W P +V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 443 SWIKRLDISTPISMQLDN--WPNDMQTCTFQV 532
+ TP+ + D+ WP D+ CT +
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHI 177
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 50.0 bits (114), Expect = 3e-08
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Frame = +2
Query: 185 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 358
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 359 PGVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 520
P +VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTC 165
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 50.0 bits (114), Expect = 3e-08
Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Frame = +2
Query: 134 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 298
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 299 WNAGEWGCSTWL-VSSERLWRPGVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 463
W E+G L V S+ +WRP +VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 464 ISTPISMQLDNWPNDMQTCTFQV 532
+ S+ ++ +P D+QTC ++
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKL 171
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 49.6 bits (113), Expect = 4e-08
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 7/139 (5%)
Frame = +2
Query: 134 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 298
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 299 WNAGEWGCSTWL-VSSERLWRPGVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 472
W E+G L V S+ +WRP +VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 473 PISMQLDNWPNDMQTCTFQ 529
+ ++ +P D QTC +
Sbjct: 152 SCEIDVEYFPFDEQTCVLK 170
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 49.6 bits (113), Expect = 4e-08
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 12/159 (7%)
Frame = +2
Query: 80 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 238
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 239 ESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPGVVLLNAAATTAGDYAL- 412
T + ++ W D +L WN ++ G T V SE +W P +VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 413 ---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 520
+A + + G V W + + ++ +P D QTC
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTC 159
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 49.2 bits (112), Expect = 5e-08
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Frame = +2
Query: 122 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 286
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 287 KRLSWNAGEWGCSTWLVSSERLWRPGVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 457
RLS+ S + ER+WRP N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 458 LDISTPISMQLDNWPNDMQTC 520
L I M+L N+P D Q+C
Sbjct: 156 LTIKAKCPMELRNFPMDRQSC 176
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 48.8 bits (111), Expect = 6e-08
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 12/141 (8%)
Frame = +2
Query: 134 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 292
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 293 LSWNAGEWGCSTWL-VSSERLWRPGVVLLNAAATTAGDYAL----RARVSNNGSVSWIKR 457
L WN E+G L V SE +W P +VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPP 151
Query: 458 LDISTPISMQLDNWPNDMQTC 520
+ + ++ +P D Q+C
Sbjct: 152 AIYKSSCEINVEYFPFDEQSC 172
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 8e-08
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +2
Query: 224 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPGVVLLNAA-ATTA 397
++ E + A L++ W+D L WN E+ G ++ +LW+P +++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 398 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 520
G Y V++NGS ++ + + + +P D Q C
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 193
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 8e-08
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +2
Query: 224 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPGVVLLNAA-ATTA 397
++ E + A L++ W+D L WN E+ G ++ +LW+P +++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 398 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 520
G Y V++NGS ++ + + + +P D Q C
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 193
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 48.0 bits (109), Expect = 1e-07
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +2
Query: 224 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPGVVLLNAA-ATTA 397
++ E + A L++ W+D L WN E+ G ++ +LW+P +++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 398 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 520
G Y V++NGS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 125
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 48.0 bits (109), Expect = 1e-07
Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 3/117 (2%)
Frame = +2
Query: 188 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPG 364
+V L+LH ++ E + + W D L WNA E+ G V R+WRP
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 365 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQ 529
+L N A + VS+ G V W+ + + ++ +P D Q C +
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLK 148
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +2
Query: 224 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPGVVLLNAA-ATTA 397
++ E + A L++ W+D L WN E+ G ++ +LW+P +++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 398 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 520
G Y V+++GS ++ + M + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHC 125
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 46.8 bits (106), Expect = 3e-07
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +2
Query: 224 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPGVVLLNAA-ATTA 397
++ E + A L++ W+D L WN E+ G ++ +LW+P +++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 398 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 520
G Y V+++GS ++ + M + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHC 125
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 46.0 bits (104), Expect = 4e-07
Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +2
Query: 224 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPGVVLLNAA-ATTA 397
++ E + A L++ W+D L WN E+ G ++ +LW+P +++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 398 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 520
G Y V+++GS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHC 125
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +2
Query: 224 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPGVVLLNAA-ATTA 397
++ E + A L++ W+D L WN E+ G ++ +LW+P +++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 398 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 520
G Y V+++GS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHC 125
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +2
Query: 224 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPGVVLLNAA-ATTA 397
++ E + A L++ W+D L WN E+ G ++ +LW+P +++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 398 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 520
G Y V+++GS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHC 125
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 45.2 bits (102), Expect = 8e-07
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Frame = +2
Query: 113 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 280
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 281 IDKRLSWNAGEWGCSTWLVSSE---RLWRPGVVLLNAA------ATTAGDYALRARVSNN 433
D RL++ G T V SE +W P +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 434 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFQV 532
GS++ RL I+ M L +P D Q C ++
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 45.2 bits (102), Expect = 8e-07
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 7/152 (4%)
Frame = +2
Query: 86 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 250
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 251 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPGVVLLNAA-ATTAGDYALRARV 424
L++ W D + WN ++G L + RLW+P V++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 425 SNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 520
NNG+ ++ + + + +P D Q C
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRC 162
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.0 bits (99), Expect = 2e-06
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 12/145 (8%)
Frame = +2
Query: 134 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 292
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 293 LSWN--AGEWGCSTWLVSSERLWRPGVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 457
L +N G T L + R+W P + N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 458 LDISTPISMQLDNWPNDMQTCTFQV 532
+ ++ M L +P D Q C+ ++
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRM 178
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 44.0 bits (99), Expect = 2e-06
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Frame = +2
Query: 113 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 280
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 281 IDKRLSWNAGEWGCSTWLVSSE---RLWRPGVVLLNAA------ATTAGDYALRARVSNN 433
D RL++ G T V SE +W P +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 434 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFQV 532
GS++ RL I+ M L +P D Q C ++
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 44.0 bits (99), Expect = 2e-06
Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 8/145 (5%)
Frame = +2
Query: 110 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 277
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 278 WIDKRLSWNAGEW-GCSTWLVSSERLWRPGVVLLNAAATT---AGDYALRARVSNNGSVS 445
W D LSW ++ G + V S+ +W P + + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 446 WIKRLDISTPISMQLDNWPNDMQTC 520
+ + + +WP D C
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRC 183
Score = 26.6 bits (56), Expect = 0.29
Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 501 PTTCRLARFKFGSRMHNSDEMDFVIDKRIYSM---FESGAWDVTALSS 635
P R FGS +H+ +E++ +DK+ + M + WD + +
Sbjct: 177 PYDTHRCRINFGSWVHSGEEVNIFLDKKGFHMDGYTNNSKWDFKVIKA 224
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.1 bits (92), Expect = 1e-05
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Frame = +2
Query: 134 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 292
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 293 LSWN--AGEWGCSTWLVSSERLWRPGVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 457
L +N G T L + R+W P + N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 458 LDISTPISMQLDNWPNDMQTCTFQV 532
+ ++ M L +P D Q C+ ++
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRM 178
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 39.1 bits (87), Expect = 5e-05
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Frame = +2
Query: 227 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPGVVLLNAAATTAGDY 406
I E I L W D+RL+++ E + +E++W P N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 407 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQV 532
R R+S +GSV++ R + M L +P D Q CT ++
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEI 179
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 35.5 bits (78), Expect = 6e-04
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Frame = +2
Query: 278 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPGVVLLNAA------ATTAGDYALRARVSN 430
W D RL++ G T V SE +W P +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 431 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQV 532
+GS++ RL I+ M L +P D Q C ++
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 95
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 34.3 bits (75), Expect = 0.001
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Frame = +2
Query: 110 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 274
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 275 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPGV--VLLNAAATTAGDYALRARVSNNGSVS 445
W D RL + N ++ + + +W P ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 446 WIKRLDISTPISMQLDNWPNDMQTCTFQV 532
++ R + +L+ +P D C+F +
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 34.3 bits (75), Expect = 0.001
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Frame = +2
Query: 110 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 274
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 275 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPGV--VLLNAAATTAGDYALRARVSNNGSVS 445
W D RL + N ++ + + +W P ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 446 WIKRLDISTPISMQLDNWPNDMQTCTFQV 532
++ R + +L+ +P D C+F +
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 34.3 bits (75), Expect = 0.001
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Frame = +2
Query: 110 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 274
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 275 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPGV--VLLNAAATTAGDYALRARVSNNGSVS 445
W D RL + N ++ + + +W P ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 446 WIKRLDISTPISMQLDNWPNDMQTCTFQV 532
++ R + +L+ +P D C+F +
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 30.3 bits (65), Expect = 0.024
Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Frame = +2
Query: 188 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 361
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 362 GV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQV 532
++ R+ NG+V+++ R + +L+ +P D C+F +
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAI 255
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 29.1 bits (62), Expect = 0.054
Identities = 22/108 (20%), Positives = 46/108 (42%), Gaps = 5/108 (4%)
Frame = +2
Query: 224 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPGVVLLNAAATTA 397
+I E T L +W D RL N E + +WRP NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 398 GDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQV 532
+ ++ + ++ ++ ++ +L + +M+ +++P+D Q C+ +
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMI 150
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 628 CPVRCXARTVARWKXXWQ 681
C VRC A + RW W+
Sbjct: 19 CSVRCSAASGLRWFEIWR 36
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 3.6
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 343 GTLVEAWRGTAKRGCN 390
G +V WRG+A CN
Sbjct: 1321 GHVVRPWRGSATLACN 1336
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 3.6
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 343 GTLVEAWRGTAKRGCN 390
G +V WRG+A CN
Sbjct: 1317 GHVVRPWRGSATLACN 1332
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 331 PSAAAPLPCVPTQS 290
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>U66709-1|AAB07515.1| 182|Apis mellifera ankyrin protein.
Length = 182
Score = 21.8 bits (44), Expect = 8.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 593 TVYSFVNHEIHFVTIVHPRTELETCKS 513
T +FVN + F T V R L C++
Sbjct: 99 TPLTFVNDTVSFTTTVSARFWLMDCRN 125
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,400
Number of Sequences: 438
Number of extensions: 4262
Number of successful extensions: 64
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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