Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_E07
(850 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 259 7e-68
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 250 4e-65
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 203 5e-51
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 197 3e-49
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 187 4e-46
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 185 1e-45
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 182 8e-45
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 180 5e-44
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 173 4e-42
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 173 4e-42
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 170 3e-41
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 169 6e-41
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 167 4e-40
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 162 1e-38
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 159 6e-38
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 154 3e-36
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 131 2e-29
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 118 1e-25
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 112 9e-24
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 110 5e-23
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 93 6e-18
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 93 8e-18
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 89 2e-16
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 89 2e-16
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 87 5e-16
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 86 1e-15
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 82 1e-14
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 78 3e-13
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 77 6e-13
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 75 3e-12
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 65 2e-09
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 65 2e-09
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 64 6e-09
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 47 7e-04
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 44 0.004
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 43 0.008
UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole gen... 42 0.020
UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687; ... 38 0.42
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.7
UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella ve... 36 1.7
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 35 3.0
UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; ... 34 5.2
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 34 5.2
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 33 6.9
UniRef50_A1FG00 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_P45684 Cluster: RNA polymerase sigma factor rpoS; n=39;... 33 6.9
UniRef50_A4RCN1 Cluster: Putative uncharacterized protein; n=2; ... 33 9.1
UniRef50_P04196 Cluster: Histidine-rich glycoprotein precursor; ... 33 9.1
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 259 bits (634), Expect = 7e-68
Identities = 126/203 (62%), Positives = 144/203 (70%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGG
Sbjct: 24 LPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGG 83
Query: 354 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 533
THRSGQGAFGNMCRGGRMFAPTK WRRWH ++GH
Sbjct: 84 THRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHR 143
Query: 534 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRPSYP 713
IE++PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNR
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQ 203
Query: 714 A*GXPHNLQTRIRV*LXPFRNIP 782
G P + + FRNIP
Sbjct: 204 RRG-PCIIYNEDNGIIKAFRNIP 225
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 250 bits (611), Expect = 4e-65
Identities = 123/203 (60%), Positives = 144/203 (70%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
LP VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRGGG
Sbjct: 27 LPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGG 86
Query: 354 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 533
THRSGQGAFGNMCRGGRMFAPTK +RRWH Q++GH+
Sbjct: 87 THRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHV 146
Query: 534 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRPSYP 713
I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+R
Sbjct: 147 IDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIA 206
Query: 714 A*GXPHNLQTRIRV*LXPFRNIP 782
G P + + FRNIP
Sbjct: 207 RRG-PLVVYDKDEGLRKAFRNIP 228
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 203 bits (495), Expect = 5e-51
Identities = 100/180 (55%), Positives = 119/180 (66%), Gaps = 3/180 (1%)
Frame = +3
Query: 171 PLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 350
PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQTSAESWGTGRAVARIPRV GG
Sbjct: 22 PLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQTSAESWGTGRAVARIPRVSGG 81
Query: 351 GTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGH 530
GTHR+GQ AFGNMCR GRMFAPTK WR+WH ARGH
Sbjct: 82 GTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRFATVSALAASGVPALLFARGH 141
Query: 531 IIEKIPELPLVVADKVQE---INKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 701
I ++ E+PLV+ +V E I +T A L+ + A D+ KV S++LRAGKGK+R R
Sbjct: 142 QISEVAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKDVEKVKDSRKLRAGKGKLRGR 201
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 197 bits (481), Expect = 3e-49
Identities = 95/177 (53%), Positives = 116/177 (65%)
Frame = +3
Query: 171 PLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 350
PLP VF APIR D+V VH +M+KNSRQ Y V++ +G SA SWGTGRAVARIPR+ GG
Sbjct: 22 PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNHSAHSWGTGRAVARIPRISGG 81
Query: 351 GTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGH 530
GT SG GAFGNMCRGGRMFAPTK +RRWH +RGH
Sbjct: 82 GTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRFAVVSALAASSVPSLVMSRGH 141
Query: 531 IIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 701
I +PE+PLVV D +Q KTK+A+ FL+ + A D+ +V S+ +RAG+GKMRNR
Sbjct: 142 QIGNVPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMRNR 198
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 187 bits (455), Expect = 4e-46
Identities = 89/177 (50%), Positives = 112/177 (63%)
Frame = +3
Query: 171 PLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 350
PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q SAESWGTGRAVARIPRV G
Sbjct: 24 PLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHSAESWGTGRAVARIPRVSGS 83
Query: 351 GTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGH 530
GTHRSGQ AFGN CR GRM P K WRRWH ARGH
Sbjct: 84 GTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRHAAATAVAATGIVPLVLARGH 143
Query: 531 IIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 701
I ++P++PLVV DK++ KT A+ FL+R A+ D+ KV ++ +RAG K R +
Sbjct: 144 RISQVPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDVQKVVSTKVVRAGISKQRGK 200
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 185 bits (450), Expect = 1e-45
Identities = 95/179 (53%), Positives = 113/179 (63%), Gaps = 2/179 (1%)
Frame = +3
Query: 171 PLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 350
PLP VF +P+R DLV V +MSKN RQ Y VS +AGHQ SAESWGTGRAVARIPRV
Sbjct: 24 PLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAGHQHSAESWGTGRAVARIPRVSAS 83
Query: 351 GTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGH 530
GT RSGQGAFGNMCRGG MF+P K +RR+H ARGH
Sbjct: 84 GTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTEKRHAVAAAIAATGCPSLVMARGH 143
Query: 531 IIEKIPELPLVVADKVQEINKTKQAVIFLRRL-KAWSDILK-VYKSQRLRAGKGKMRNR 701
I +PELPLV+++++Q INKT AV F + K + +K + S +R GKGKMRNR
Sbjct: 144 RINNVPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGKGKMRNR 202
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 182 bits (444), Expect = 8e-45
Identities = 96/203 (47%), Positives = 119/203 (58%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
+P VF+ PIR DL+ + +MSKN R PY V AG++TSAESWGTGRAVARIPRV GGG
Sbjct: 24 IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAGYETSAESWGTGRAVARIPRVPGGG 83
Query: 354 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 533
THR+GQ AFGNMCRGG MF PTK WRRW ARGH
Sbjct: 84 THRAGQAAFGNMCRGGGMFNPTKIWRRWGRKINLKEKRYAVCSSIAASGITSLVLARGHR 143
Query: 534 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRPSYP 713
I + E+PLV ++ ++ + KTK A+ FL L ++ ++ KS +LRA GKMRNR Y
Sbjct: 144 ISNLKEVPLVASNDIESMQKTKDALKFLISLGLRDEVNRLIKSXKLRARXGKMRNR-KYK 202
Query: 714 A*GXPHNLQTRIRV*LXPFRNIP 782
P + + FRNIP
Sbjct: 203 ISNGPLIIYSXDSGIKKAFRNIP 225
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 180 bits (437), Expect = 5e-44
Identities = 88/177 (49%), Positives = 113/177 (63%), Gaps = 1/177 (0%)
Frame = +3
Query: 174 LPFVFK-APIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGG 350
+P V + +PIRPD+V+ VH++++KN RQP+ AGHQ SAESWGTGRAVAR+PR+ G
Sbjct: 23 VPSVIRYSPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAESWGTGRAVARVPRISGS 82
Query: 351 GTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGH 530
GT R+GQ AF N RGG M++P K WRRWH ARGH
Sbjct: 83 GTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMCSAIAASSNPSLVLARGH 142
Query: 531 IIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 701
I+ +PELPLVV+D V++I KTK+AV L LKA D+ +S+R+R G GK RNR
Sbjct: 143 KIDNVPELPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRIRVGSGKARNR 199
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 173 bits (422), Expect = 4e-42
Identities = 90/177 (50%), Positives = 114/177 (64%), Gaps = 1/177 (0%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q SA SWGTGRAVARIPR+ G G
Sbjct: 24 LPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQHSAISWGTGRAVARIPRISGSG 83
Query: 354 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 533
+ R+GQGAFGNM R G MF+P K +R+W ARGH
Sbjct: 84 SGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRFAVASCIAASAVPALVSARGHH 143
Query: 534 IEKIPELPLVVADK-VQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 701
I +P++PLVV K + I KTKQAV L+++ A+SD+LKV S+ +RAG+GKMR R
Sbjct: 144 IAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMRGR 200
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 173 bits (422), Expect = 4e-42
Identities = 83/173 (47%), Positives = 110/173 (63%), Gaps = 1/173 (0%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
+P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTSA SWGTGRA+AR+PRV+GGG
Sbjct: 23 MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTSARSWGTGRAMARVPRVKGGG 82
Query: 354 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 533
THR+GQ A+ N CR G M+APT+ WRRWH +RGH
Sbjct: 83 THRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQALASALAATAVVPVVMSRGHR 142
Query: 534 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYK-SQRLRAGKGK 689
IE + E+P+VV D +++INKTK AV L + +++ ++ K + R R G+ K
Sbjct: 143 IEALREVPMVVDDAIEQINKTKDAVKLLETIGLGAELKRIDKVTGRARDGRKK 195
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 170 bits (414), Expect = 3e-41
Identities = 86/176 (48%), Positives = 104/176 (59%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
LP VF PIR DLV + +RQPY VSK AG Q SAESWGTGRA+AR+PRV+GGG
Sbjct: 21 LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAESWGTGRAIARVPRVKGGG 80
Query: 354 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 533
T R+GQGAF N CR GRM PTK RRW +ARGH
Sbjct: 81 TRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAMAVAASAQASLVEARGHR 140
Query: 534 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 701
I + LP++V+D + + KTK AV LR L ++ +V KS+ +R GKGKMRNR
Sbjct: 141 ISDVKMLPIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKSRGVRCGKGKMRNR 196
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 169 bits (412), Expect = 6e-41
Identities = 79/174 (45%), Positives = 107/174 (61%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
+P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+QTSA SWGTGRA++R PRV+GGG
Sbjct: 23 MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQTSARSWGTGRALSRTPRVKGGG 82
Query: 354 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 533
THRSGQ A+ N CR G MFAPT+ WR WH +RGH
Sbjct: 83 THRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEKRLALAVSVAATASVPLVMSRGHR 142
Query: 534 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 695
+E +PELPLV+ D ++ + KT+ AV L + ++ +V ++R + KGK R
Sbjct: 143 VESVPELPLVLDDTMETLTKTRDAVELLNSMGLADELKRVSVTKRTKR-KGKKR 195
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 167 bits (405), Expect = 4e-40
Identities = 74/89 (83%), Positives = 80/89 (89%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWGTGRAVARIPRVRGGG
Sbjct: 141 LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWGTGRAVARIPRVRGGG 200
Query: 354 THRSGQGAFGNMCRGGRMFAPTKPWRRWH 440
THRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 201 THRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 162 bits (393), Expect = 1e-38
Identities = 80/176 (45%), Positives = 106/176 (60%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
+P VF + IR D+V VH +M KN RQ Y VS AG TSA SWGTGRAV+R+PRV G G
Sbjct: 19 IPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSG 78
Query: 354 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 533
THRSGQGA N CRGGR+F PT WR+WH +RG+
Sbjct: 79 THRSGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSAIASSSIVSIIVSRGYR 138
Query: 534 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 701
++ IPE+P V+ D +++I KT+ + L L + I++ ++L++GKGKMRNR
Sbjct: 139 VKTIPEIPFVIEDSIEKIPKTRDLIKILTTL-GINSIVRNKLKRKLKSGKGKMRNR 193
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 159 bits (387), Expect = 6e-38
Identities = 78/157 (49%), Positives = 96/157 (61%), Gaps = 3/157 (1%)
Frame = +3
Query: 240 KNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 419
++++ V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPT
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPT 81
Query: 420 KPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKV---QEIN 590
K WR+WH ARGH + +PE+PLV++ I
Sbjct: 82 KVWRKWHQKINLNQKRFATASALAASGSPALLMARGHNVSTVPEVPLVISSTAFADAAIR 141
Query: 591 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 701
KT AV L+ + A +D K S++LRAGKGK+R R
Sbjct: 142 KTSAAVALLKAVGAGADCEKAKNSRKLRAGKGKLRGR 178
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 154 bits (373), Expect = 3e-36
Identities = 79/203 (38%), Positives = 114/203 (56%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
LP VF PIR ++V +V+V+++KN++QP+ AG + SA SWGTGRA A +PRV G G
Sbjct: 21 LPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKKVSAISWGTGRAKACVPRVNGSG 80
Query: 354 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 533
++R+GQGA+ N CRGG F P RRW QARGH+
Sbjct: 81 SNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRKFAIASAIAATAVVPLVQARGHV 140
Query: 534 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRPSYP 713
+ ++ E+P+VV D VQEI +T+ AV L+++ + D+ +V R+ KGK R R +Y
Sbjct: 141 LGEVKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQRVLDGSVHRSSKGKFR-RAAYK 199
Query: 714 A*GXPHNLQTRIRV*LXPFRNIP 782
P + + + FRNIP
Sbjct: 200 TKKGPLVIYNEDKGIVKAFRNIP 222
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 131 bits (316), Expect = 2e-29
Identities = 72/180 (40%), Positives = 93/180 (51%)
Frame = +3
Query: 162 AAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRV 341
A P P VF P+RPD++N VH + K R PY VS+ AG Q +A SWG GRAVAR+PR
Sbjct: 16 AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTAHSWGPGRAVARLPRK 75
Query: 342 RGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQA 521
G G GA+ N RGG M PT RRW +A
Sbjct: 76 HG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAVASALAASANAALVEA 129
Query: 522 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 701
RGH I +P +PLVV + KTK A+ ++ + D+ + S+ +RAG+GKMRNR
Sbjct: 130 RGHRIADVPSIPLVV--DTDNVTKTKDALAIIKAVGVLRDVERCKDSRHIRAGRGKMRNR 187
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 118 bits (285), Expect = 1e-25
Identities = 61/177 (34%), Positives = 92/177 (51%), Gaps = 1/177 (0%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
LP F+ P+R DL+ ++ N RQPY AG +TSAESWG G VA +PRV+G
Sbjct: 18 LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSAESWGAGHGVAMVPRVKGRR 77
Query: 354 THRSGQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGH 530
+G+ A GG + APT P + W + RGH
Sbjct: 78 HPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKERRAALRSALAATAKPEFVKERGH 136
Query: 531 IIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 701
+I+ +P LP+VV D+++ +NK ++ F + + W+D+ + ++R+RAGKGK R R
Sbjct: 137 VIDDVPHLPVVVVDELKSLNKAREVREFFKSVGLWADVERAKSNRRIRAGKGKRRGR 193
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 112 bits (270), Expect = 9e-24
Identities = 55/87 (63%), Positives = 68/87 (78%)
Frame = +3
Query: 522 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 701
RG++++ + E+PLVV+DK+QEINKTKQAVIFLRR+KAWSD+LKVYKSQRLRAGKGKMRNR
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR 64
Query: 702 PSYPA*GXPHNLQTRIRV*LXPFRNIP 782
G P + + + FRNIP
Sbjct: 65 RRLHRKG-PLIIYNKDQGLTRSFRNIP 90
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 110 bits (264), Expect = 5e-23
Identities = 62/175 (35%), Positives = 85/175 (48%)
Frame = +3
Query: 177 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 356
P F PIRPDL+ ++S QP V + AG + S ES+G G +ARIPR +G
Sbjct: 45 PLHFLEPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVGLGIARIPRYKGSLW 104
Query: 357 HRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHII 536
R G F RGGR P K ++ H ARGH++
Sbjct: 105 PR---GCFAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAIRSAIAATAYRSWVAARGHVV 161
Query: 537 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 701
EK+P LP+VV ++IN+ K+A L W D+ + + ++RAGKGKMR R
Sbjct: 162 EKVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRGR 216
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 93.5 bits (222), Expect = 6e-18
Identities = 54/176 (30%), Positives = 84/176 (47%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
LP +F P+R DL+ V ++ +S QP AG +TSAES+G +AR+PRV+
Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVKN-- 82
Query: 354 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 533
SG+ A GGR+ P ++ +ARGH+
Sbjct: 83 ---SGEAALAPNTVGGRLAFPPSVNKKLAEEANVKEKRLAVISALSATADIAFVRARGHV 139
Query: 534 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 701
+ P+VV D + + T + FL+++ + D+ +V + R+RAGKGKMR R
Sbjct: 140 FKDSVRFPIVVTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMRGR 195
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 93.1 bits (221), Expect = 8e-18
Identities = 50/176 (28%), Positives = 86/176 (48%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
LP +F+ RPD++ +SM QP+ AG +T+AES+G+GR A +PRV+G
Sbjct: 19 LPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAESFGSGRGAAMVPRVKG-- 76
Query: 354 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 533
S + AF GGR P + +H + RGH
Sbjct: 77 ---SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKERTLAIRSAIAATANKELVEQRGHQ 133
Query: 534 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 701
+ ++ ++P V+ D+++ + TK+ + L DI++ K +++++GKGK+R R
Sbjct: 134 VSELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKGRKIKSGKGKLRGR 189
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 88.6 bits (210), Expect = 2e-16
Identities = 39/60 (65%), Positives = 51/60 (85%)
Frame = +3
Query: 519 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 698
++GH I ++PELPLVV DKV+ KT++AV+ L++LKAW+DI KVY SQR+RAGKGKMRN
Sbjct: 2 SKGHRIGEVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 88.6 bits (210), Expect = 2e-16
Identities = 69/216 (31%), Positives = 93/216 (43%), Gaps = 9/216 (4%)
Frame = +3
Query: 162 AAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRV 341
A+ +P VF +PIR D+VN VH ++KN + + + A PR
Sbjct: 16 ASCAMPEVFLSPIRADIVNAVHTGLAKNDSTTDEIQLCFLLDSQGKRTPCTDVPATKPRP 75
Query: 342 RGGGTHRSGQGAFGNMCRGGRMFAPTK---------PWRRWHXXXXXXXXXXXXXXXXXX 494
G + +CR AP K WRRWH
Sbjct: 76 SPGAP--VARSLVFRVCRAVVPTAPVKGRSVTCAAVTWRRWHRRVNIKEKRYAVCSAIAA 133
Query: 495 XXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLR 674
ARGH +E +PE+PLVV D I KT +AV L++L A++DI KV S+ +R
Sbjct: 134 SAVPSLLLARGHRVEGVPEVPLVVDDSASSIKKTAKAVELLKQLGAYADIEKVKASRNVR 193
Query: 675 AGKGKMRNRPSYPA*GXPHNLQTRIRV*LXPFRNIP 782
+GKGKMRNR Y P + + FRNIP
Sbjct: 194 SGKGKMRNR-RYVQRRGPLVVYSEDNGVTRAFRNIP 228
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 87.0 bits (206), Expect = 5e-16
Identities = 41/133 (30%), Positives = 67/133 (50%)
Frame = +3
Query: 276 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 455
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNR 118
Query: 456 XXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAW 635
+RGH ++ + P+++ ++ I + ++ L+ +
Sbjct: 119 KVKVSAFKTALLSTLFETLVVSRGHSLKDVKNFPMIIDSILKYIWHPSELLMLLKLYGGY 178
Query: 636 SDILKVYKSQRLR 674
SD K S R
Sbjct: 179 SDFKKAMISHAKR 191
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 85.8 bits (203), Expect = 1e-15
Identities = 51/176 (28%), Positives = 81/176 (46%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
LP VF RPD++ +++ + RQPY + +G S E+WG G AR+PR + G
Sbjct: 18 LPEVFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWGPGHGYARVPRWKLG- 76
Query: 354 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 533
+ GGR P KP R+W + R H+
Sbjct: 77 ----RRAVVVPQAVGGRRAHPPKPERKWAEKINKKEMRKALKSAIAATANEELVRQRSHV 132
Query: 534 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 701
E ELP VV+++++ + +TK R + ++D+ + + +R RAG+GKMR R
Sbjct: 133 FE--GELPKVVSNELESVKRTKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGR 186
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 82.2 bits (194), Expect = 1e-14
Identities = 54/179 (30%), Positives = 81/179 (45%), Gaps = 2/179 (1%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG--TGRAVARIPRVRG 347
LP VF P R DL+ + + + QP AG SA+S TG ARI R++G
Sbjct: 18 LPPVFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQARIARMKG 77
Query: 348 GGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARG 527
GG R G+ RGGR P K + H RG
Sbjct: 78 GGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAIAATASKSTVAGRG 137
Query: 528 HIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRP 704
HII+ I ELP+V++D ++ ++K + L L ++D+ ++ + ++ R GK +R RP
Sbjct: 138 HIIDGI-ELPIVISDDIESVSKASEVRKILSALGLFADVNRL-EGRKPRTGKSALRGRP 194
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 77.8 bits (183), Expect = 3e-13
Identities = 55/177 (31%), Positives = 80/177 (45%), Gaps = 1/177 (0%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
LP +F+ P+R DL+ +S QP AG +TSA S G GR VAR+PR++G
Sbjct: 31 LPQIFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG-- 88
Query: 354 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 533
S + A NM RGGR P + + + RGH
Sbjct: 89 ---SLRAALVNMARGGRAAHPPRVEKVLKEYINKKEKRLATISAISATSREDLVRQRGHR 145
Query: 534 IEKIPELPLVVADKV-QEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 701
LP+V+ V +I+ ++A L + + D+L+ + +R AGKGKMR R
Sbjct: 146 F-SAETLPIVLDSSVLAKISTAREARSLLESVGVYEDVLRAKEGKRYNAGKGKMRGR 201
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 77.0 bits (181), Expect = 6e-13
Identities = 50/176 (28%), Positives = 80/176 (45%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
LP VF +R D++ ++S + RQPY S AG + + G ++R+PR+ GG
Sbjct: 20 LPEVFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHTTRPGLGISRMPRIAGGS 79
Query: 354 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 533
A G G+ + + + + RGH
Sbjct: 80 RVVGIASAVG-----GKSAHSPRTTKNLYVKINDRERKMAKYSAIALTASVEAVKKRGHR 134
Query: 534 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 701
++ +LP+VV D V+ INKTK A+ L+ L + DI + + + +RAG+GKMR R
Sbjct: 135 FKEGLKLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREGKHIRAGRGKMRGR 190
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 74.5 bits (175), Expect = 3e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +3
Query: 207 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
Score = 66.1 bits (154), Expect = 1e-09
Identities = 29/43 (67%), Positives = 36/43 (83%)
Frame = +3
Query: 573 KVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 701
KV+ KTK+ V+ L++LKAW+DI KVY SQR+RAGKGKMRNR
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNR 140
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = +3
Query: 519 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 698
ARGH IE +PELPLV+ D + + KT A+ L++ A+ D K S + GKGKMRN
Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRN 61
Query: 699 R 701
R
Sbjct: 62 R 62
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 64.9 bits (151), Expect = 2e-09
Identities = 49/176 (27%), Positives = 80/176 (45%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
LP VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ + G
Sbjct: 18 LPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPK-QDGR 76
Query: 354 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 533
R Q GR P K + RGH
Sbjct: 77 ARRVPQAV------KGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHE 130
Query: 534 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 701
++ E+P+VV+D +++ KT++ V L L +DI + ++ +++AG+G R R
Sbjct: 131 FDR-DEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADET-KIKAGQGSARGR 184
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 63.7 bits (148), Expect = 6e-09
Identities = 56/187 (29%), Positives = 84/187 (44%), Gaps = 11/187 (5%)
Frame = +3
Query: 174 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA------ESWGT--GRAVAR 329
LP F IR D++ +++ + RQPY S AG Q SA SW T GR ++R
Sbjct: 18 LPPQFNEKIRFDVIKRAFLAIQSHKRQPYGASPIAGKQHSAWTSKRRRSWRTSYGRGISR 77
Query: 330 IPRV---RGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXX 500
+ R R G +G + P K + W+
Sbjct: 78 VSRAILRRHGALFYWVARNIAQAVKGKKAHPP-KAEKDWYEKINKKERRLAIRSALAATK 136
Query: 501 XXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAG 680
+ARGHII+K +P+VV D ++++ KTK+ L +L ++ +VY+ +R RAG
Sbjct: 137 ELDLVKARGHIIDK--PVPIVV-DGLEQLRKTKEIQQLLLKLGLEKELERVYEIKR-RAG 192
Query: 681 KGKMRNR 701
KGK R R
Sbjct: 193 KGKRRGR 199
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 46.8 bits (106), Expect = 7e-04
Identities = 52/201 (25%), Positives = 74/201 (36%), Gaps = 22/201 (10%)
Frame = +3
Query: 165 AKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK-------EAGHQTSAESWGTGRAV 323
A LP VF IR DL+ ++ N RQ Y + +AG + S E WG GR V
Sbjct: 47 AVTLPDVFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWWGKGRGV 106
Query: 324 ARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXX 503
+RI R G T A RGGR K + W
Sbjct: 107 SRIMRKAGQRT-----AAQNPHTRGGRRAHGPKVDKDWSQKINSKENRIARDSAIAASAS 161
Query: 504 XXXXQARGHIIEKIPELPLVV---------ADKVQEIN------KTKQAVIFLRRLKAWS 638
RGH E P+++ D+ ++ T++ V + L +
Sbjct: 162 SNLVSERGHHFEASLRFPIIIDGYVESREGGDEKYDLESLPLQYSTRKFVAMMEGLGLGA 221
Query: 639 DILKVYKSQRLRAGKGKMRNR 701
D+ + + +RAGKG MR R
Sbjct: 222 DLDRARTGRTIRAGKGTMRGR 242
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 44.4 bits (100), Expect = 0.004
Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
Frame = +2
Query: 350 WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGLGGSRCCYRRPSARSG*RT 529
W VR C+R HV WW +VR E L LAP QP A L C R A +G
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP--APEALRCGVCARRVVCAVAGDVA 191
Query: 530 HY*KDSRA--SLGCSRQSPRDQQDQTGCHLPEAPQGMV*YP*GVQVSASSCW*G*NAQP 700
RA + G P ++D+ G +PE + +++ CW +AQP
Sbjct: 192 RPPDRQRAGGAAGGGGLDPGLREDEGGYGVPEGDRCDRRREPRERLARDPCWPRQDAQP 250
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 43.2 bits (97), Expect = 0.008
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +3
Query: 564 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 701
V DK++ KTK A+ FL+R A+ D+ KV ++ +RAG K R +
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGK 46
>UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_113, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 145
Score = 41.9 bits (94), Expect = 0.020
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +3
Query: 519 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 650
ARGH IE + ELPLV+ D + ++KT + L+++ A D+ K
Sbjct: 24 ARGHRIESVLELPLVIGDSTKSVDKTSTTIDILKQVGACPDVEK 67
>UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687;
n=1; Homo sapiens|Rep: CDNA FLJ46551 fis, clone
THYMU3038687 - Homo sapiens (Human)
Length = 189
Score = 37.5 bits (83), Expect = 0.42
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +2
Query: 311 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 475
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 476 GGSRCCYRRPSARS 517
G+ C P+ RS
Sbjct: 139 HGAPSCLSTPAPRS 152
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.7
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +3
Query: 324 ARIPRVRGGGTHRSGQGAFGNMCRGG 401
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 263
Score = 35.5 bits (78), Expect = 1.7
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -2
Query: 408 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQP 274
TY+ H Y +HP T+ YHH H + ++ Q+P + H + P
Sbjct: 114 TYLTHR--YHQHPQVTHRYHHQ-HPQVTHRYHQHPQVTHRYHQHP 155
Score = 33.9 bits (74), Expect = 5.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -2
Query: 384 YRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQP 274
Y +HP T+ YHH R H Q P I H + P
Sbjct: 75 YHQHPQVTHRYHHQHPQVTYRYHHQQPQITHRYHQHP 111
Score = 33.1 bits (72), Expect = 9.1
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -2
Query: 408 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 271
T + +++HP T+ YHH H + ++ Q+P + H + Q P
Sbjct: 3 TPTSYSQLFQQHPQVTHHYHHQ-HPQVTHRYHQHPQVTHRYQYQHP 47
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 34.7 bits (76), Expect = 3.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 396 HDTCYRRHPDRTYEYHHHGHAEFGRQH 316
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01599.1 - Gibberella zeae PH-1
Length = 1347
Score = 33.9 bits (74), Expect = 5.2
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 405 YVHHD-TCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 292
Y H+D Y +H D + HHHG +G H + +H
Sbjct: 478 YDHNDYNYYHKHHDNKHYDHHHGDKHYGHHHEHHKHYEH 516
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 33.9 bits (74), Expect = 5.2
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +3
Query: 294 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 404
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 33.5 bits (73), Expect = 6.9
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 381 RRHPDRTYEYHHHGHAEFGRQHVQ-YPMIQHWF 286
R PD + +HHHGH G HV+ YP F
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYPATDSLF 213
>UniRef50_A1FG00 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas putida W619|Rep: Putative uncharacterized
protein - Pseudomonas putida W619
Length = 852
Score = 33.5 bits (73), Expect = 6.9
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 424 PGGVGTVASTSDSGERPWRQPLLLPASQRSFRLEDTLLKRFPSFP 558
P V +V SD G WRQ L + + FRL LK P+ P
Sbjct: 321 PAFVSSVVKVSDRGPYTWRQALAISDAALKFRLNIGKLKASPALP 365
>UniRef50_P45684 Cluster: RNA polymerase sigma factor rpoS; n=39;
Proteobacteria|Rep: RNA polymerase sigma factor rpoS -
Pseudomonas aeruginosa
Length = 334
Score = 33.5 bits (73), Expect = 6.9
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = -3
Query: 824 RRFSLLTFXEPQXPGNVAERRESDPDPCLKIMRXPLRWIRRTVAHFTLTSTKTLRL-VH- 651
R SLL E G + + DP+ + WIR+T+ + T+T+RL +H
Sbjct: 117 RGLSLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHV 176
Query: 650 LKDIRPCLEAPQE 612
+K++ L A +E
Sbjct: 177 VKELNVYLRAARE 189
>UniRef50_A4RCN1 Cluster: Putative uncharacterized protein; n=2;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 578
Score = 33.1 bits (72), Expect = 9.1
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -2
Query: 414 GRTYVH-HDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQ 277
GR++ H H TC +HP + +HHH H H P H + D+
Sbjct: 455 GRSHNHDHHTC-GQHPSHHHHHHHHHHCSVSHSVHCDDPNHHHEYEDE 501
>UniRef50_P04196 Cluster: Histidine-rich glycoprotein precursor;
n=19; Eutheria|Rep: Histidine-rich glycoprotein
precursor - Homo sapiens (Human)
Length = 525
Score = 33.1 bits (72), Expect = 9.1
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -2
Query: 399 HHDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQPPC 268
HH + H T+ H HGH G H +P H G P C
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC 408
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 829,097,226
Number of Sequences: 1657284
Number of extensions: 16602758
Number of successful extensions: 50808
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 46917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50293
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74603367202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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