Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_E06
(1140 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 34 0.22
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 33 0.38
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 33 0.38
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.5
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 31 2.0
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 31 2.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 2.0
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 30 3.5
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 30 3.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.6
Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical p... 29 6.1
Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical pr... 29 6.1
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 8.1
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.9 bits (74), Expect = 0.22
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +2
Query: 488 PGGXXPXPXXXKXXPPPXLLXGGGGXXXPXXXXGSSPPPP 607
P G P P PPP + GG P G PPPP
Sbjct: 70 PNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPP 109
Score = 28.7 bits (61), Expect = 8.1
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +1
Query: 487 PGGXXPXPXXXKXXXPPP-PFXGGGGXXXAXXGGRVFSPPPS 609
PGG P P PPP P GG G PPPS
Sbjct: 80 PGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPS 121
Score = 28.7 bits (61), Expect = 8.1
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +2
Query: 491 GGXXPXPXXXKXXPPPXLLXGGGGXXXPXXXXGSSPPPP 607
GG P P PPP + G P G +P PP
Sbjct: 92 GGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPP 130
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 33.1 bits (72), Expect = 0.38
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +3
Query: 492 GAPPPPXXXKKXXPPPXFXGGGGXXXXPPXXXGLLPPP 605
G PPPP PP GG PP G++PPP
Sbjct: 768 GVPPPPPPPSAIPLPPRLQGG----IPPPPPLGIIPPP 801
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 33.1 bits (72), Expect = 0.38
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +3
Query: 492 GAPPPPXXXKKXXPPPXFXGGGGXXXXPPXXXGLLPPP 605
G PPPP PP GG PP G++PPP
Sbjct: 768 GVPPPPPPPSAIPLPPRLQGG----IPPPPPLGIIPPP 801
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.5
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +2
Query: 488 PGGXXPXPXXXKXXPPPXLLXG-GGGXXXPXXXXGSSPPPP 607
PGG P PPP L GG P G PPPP
Sbjct: 732 PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 29.1 bits (62), Expect = 6.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 498 PPPPXXXKKXXPPPXFXGGGGXXXXPPXXXGLLPP 602
PPPP PPP GG PP G+ P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.5
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +2
Query: 488 PGGXXPXPXXXKXXPPPXLLXG-GGGXXXPXXXXGSSPPPP 607
PGG P PPP L GG P G PPPP
Sbjct: 732 PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 29.1 bits (62), Expect = 6.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 498 PPPPXXXKKXXPPPXFXGGGGXXXXPPXXXGLLPP 602
PPPP PPP GG PP G+ P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.5
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +2
Query: 488 PGGXXPXPXXXKXXPPPXLLXG-GGGXXXPXXXXGSSPPPP 607
PGG P PPP L GG P G PPPP
Sbjct: 315 PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 29.1 bits (62), Expect = 6.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 498 PPPPXXXKKXXPPPXFXGGGGXXXXPPXXXGLLPP 602
PPPP PPP GG PP G+ P
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 378
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.5
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 492 GAPPPPXXXKKXXPPPXFXGGGGXXXXPPXXXGLLPPP 605
G+PPPP PPP G PP G PPP
Sbjct: 287 GSPPPPRAGSPPPPPPP-RGSPPTGSLPPPQAGGSPPP 323
Score = 29.1 bits (62), Expect = 6.1
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 488 PGGXXPXPXXXKXXPPPXLLXGGGGXXXPXXXXGSSPPP 604
P G P P K PP G G P GS PPP
Sbjct: 233 PAGSPPPPPPPKGSPP----LAGSGSPPPPPAAGSPPPP 267
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.5
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 492 GAPPPPXXXKKXXPPPXFXGGGGXXXXPPXXXGLLPPP 605
G+PPPP PPP G PP G PPP
Sbjct: 308 GSPPPPRAGSPPPPPPP-RGSPPTGSLPPPQAGGSPPP 344
Score = 29.1 bits (62), Expect = 6.1
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 488 PGGXXPXPXXXKXXPPPXLLXGGGGXXXPXXXXGSSPPP 604
P G P P K PP G G P GS PPP
Sbjct: 254 PAGSPPPPPPPKGSPP----LAGSGSPPPPPAAGSPPPP 288
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.5
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 492 GAPPPPXXXKKXXPPPXFXGGGGXXXXPPXXXGLLPPP 605
G+PPPP PPP G PP G PPP
Sbjct: 293 GSPPPPRAGSPPPPPPP-RGSPPTGSLPPPQAGGSPPP 329
Score = 29.1 bits (62), Expect = 6.1
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 488 PGGXXPXPXXXKXXPPPXLLXGGGGXXXPXXXXGSSPPP 604
P G P P K PP G G P GS PPP
Sbjct: 239 PAGSPPPPPPPKGSPP----LAGSGSPPPPPAAGSPPPP 273
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 30.7 bits (66), Expect = 2.0
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = +3
Query: 492 GAPPPPXXXKKXXPPPXFXGGGGXXXXPPXXXGLLPPP 605
GAPPPP PPP GGGG PP +P P
Sbjct: 788 GAPPPPGMR----PPPGAPGGGGGM-YPPLIPTRVPTP 820
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 30.7 bits (66), Expect = 2.0
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = +3
Query: 492 GAPPPPXXXKKXXPPPXFXGGGGXXXXPPXXXGLLPPP 605
GAPPPP PPP GGGG PP +P P
Sbjct: 788 GAPPPPGMR----PPPGAPGGGGGM-YPPLIPTRVPTP 820
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.7 bits (66), Expect = 2.0
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 5/44 (11%)
Frame = +3
Query: 489 RGAPPPPXXXKKXXPPPXFXGG-----GGXXXXPPXXXGLLPPP 605
RG PPPP PP GG G PP G PPP
Sbjct: 1570 RGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPPPP 1613
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = -2
Query: 641 PPXFFFFFXXXEGGGEKTRPPXXAXXXPPPPXKGGGGXXFFXXXGXGXXPPG 486
PP + GGG P PPPP GGG + G G P G
Sbjct: 40 PPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFG-GPGPVG 90
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = -2
Query: 641 PPXFFFFFXXXEGGGEKTRPPXXAXXXPPPPXKGGGGXXFFXXXGXGXXPPG 486
PP + GGG P PPPP GGG + G G P G
Sbjct: 40 PPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFG-GPGPVG 90
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 4.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 498 PPPPXXXKKXXPPPXFXGGGGXXXXPP 578
PPP PPP F GG G PP
Sbjct: 772 PPPRGGMHHMPPPPSFRGGRGGHGGPP 798
>Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1a protein.
Length = 296
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 532 PPPPFXGGGGXXXAXXGGRVFSPPP 606
PPPP G GG FSPPP
Sbjct: 21 PPPPGFNTGDGQNQNQGGAYFSPPP 45
>Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1b protein.
Length = 296
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 532 PPPPFXGGGGXXXAXXGGRVFSPPP 606
PPPP G GG FSPPP
Sbjct: 21 PPPPGFNTGDGQNQNQGGAYFSPPP 45
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.7 bits (61), Expect = 8.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 604 GGGRRPXXXGGXXXXPPPPQKXGGG 530
GGG GG PPPP GGG
Sbjct: 197 GGGGSGGSGGGSGRFPPPPPPYGGG 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,170,102
Number of Sequences: 27780
Number of extensions: 336840
Number of successful extensions: 1330
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3088599568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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