Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_E04
         (803 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    25   2.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   6.3  

>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 644 RGGGXPXXKXGGPPP 600
           +GGG    K GGPPP
Sbjct: 244 QGGGGSSSKKGGPPP 258


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = -1

Query: 638 GGXPXXKXGGPPPPXXXXGGXXG 570
           GG P    G P PP    GG  G
Sbjct: 288 GGMPSGMVGPPRPPMPMQGGAPG 310


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,387
Number of Sequences: 2352
Number of extensions: 10500
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84823812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)