Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_E04
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 32 0.55
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 32 0.55
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 0.73
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 0.73
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.2
U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen prote... 29 3.9
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 29 3.9
AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical ... 29 3.9
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 29 3.9
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 29 3.9
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 29 3.9
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 29 3.9
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 6.8
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 6.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 9.0
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 9.0
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 25 9.3
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 31.9 bits (69), Expect = 0.55
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = +2
Query: 470 PXFXPXTXPXPXKXPXGVXPPXLFXXXKXXGXXXPXXPPXIXGGGGAPXFXXXGPPPP 643
P P P P P + PP P PP G G P F PPPP
Sbjct: 271 PPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFM---PPPP 325
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 31.9 bits (69), Expect = 0.55
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = +2
Query: 470 PXFXPXTXPXPXKXPXGVXPPXLFXXXKXXGXXXPXXPPXIXGGGGAPXFXXXGPPPP 643
P P P P P + PP P PP G G P F PPPP
Sbjct: 271 PPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFM---PPPP 325
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.5 bits (68), Expect = 0.73
Identities = 25/90 (27%), Positives = 26/90 (28%), Gaps = 1/90 (1%)
Frame = +2
Query: 380 PXNXXGGGXXXGKXGNXGXXXXXXX-KXFPXPXFXPXTXPXPXKXPXGVXPPXLFXXXKX 556
P N GG G G G + P F T P P G
Sbjct: 115 PFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGP 174
Query: 557 XGXXXPXXPPXIXGGGGAPXFXXXGPPPPG 646
G PP G GG P G PPPG
Sbjct: 175 PGHGGMGGPPGHGGQGGPPGHGGMGGPPPG 204
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.5 bits (68), Expect = 0.73
Identities = 25/90 (27%), Positives = 26/90 (28%), Gaps = 1/90 (1%)
Frame = +2
Query: 380 PXNXXGGGXXXGKXGNXGXXXXXXX-KXFPXPXFXPXTXPXPXKXPXGVXPPXLFXXXKX 556
P N GG G G G + P F T P P G
Sbjct: 395 PFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGP 454
Query: 557 XGXXXPXXPPXIXGGGGAPXFXXXGPPPPG 646
G PP G GG P G PPPG
Sbjct: 455 PGHGGMGGPPGHGGQGGPPGHGGMGGPPPG 484
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.2
Identities = 31/127 (24%), Positives = 35/127 (27%), Gaps = 1/127 (0%)
Frame = +1
Query: 337 PGEMGAXPXLGXGXPXKXXGGG-PXLXKXGXPGXXXXXXG*XFPXPPFFXXNXPXXLKKX 513
P G+ P G G P G P + G P P PP + P
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS----PPPPPAGGSPPPP---- 292
Query: 514 XXGXTPPXXPXXXXLXXXXPXXPPXXXXGGGGPPXXXXGXPPPRGXXXXXXPLXXXXXGX 693
+PP P PP GG PP G PPP P G
Sbjct: 293 -RAGSPPPPPPPRGSPPTGSLPPPQ---AGGSPPPAGTGSPPPPPRQKRQAPERSPPTGS 348
Query: 694 XXXXPPP 714
PP
Sbjct: 349 PPTGSPP 355
Score = 29.1 bits (62), Expect = 3.9
Identities = 33/131 (25%), Positives = 34/131 (25%), Gaps = 6/131 (4%)
Frame = +3
Query: 339 RGN-GGFXXXGXGXPXKTPXGGAXXXEXGXTXGGXXGP----GXXXSPXPXFXXKRAXXP 503
+GN GGF T G G T G G G F KR P
Sbjct: 174 QGNQGGFGGQNGQNGQNTGNNGGFGGNQGVTASGFGGQQQGFGQQQQTQNGFRGKRQAPP 233
Query: 504 XKXPXGLXPPXXSXXXKXXXXXPXXXPXXXXGGGGPPXFXXXXPPPP-GXXXXXXXXXXX 680
P PP S P G PP PPPP G
Sbjct: 234 AGSPPPPPPPKGSPPLAGSGSPPPPPA----AGSPPPPRTGSPPPPPTGSPPPPPAGGSP 289
Query: 681 XXGXXXXPPPP 713
PPPP
Sbjct: 290 PPPRAGSPPPP 300
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 647 PRGGGXPXXKXGGPPPPXXXXG 582
P GG P + G PPPP G
Sbjct: 284 PAGGSPPPPRAGSPPPPPPPRG 305
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.2
Identities = 31/127 (24%), Positives = 35/127 (27%), Gaps = 1/127 (0%)
Frame = +1
Query: 337 PGEMGAXPXLGXGXPXKXXGGG-PXLXKXGXPGXXXXXXG*XFPXPPFFXXNXPXXLKKX 513
P G+ P G G P G P + G P P PP + P
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS----PPPPPAGGSPPPP---- 313
Query: 514 XXGXTPPXXPXXXXLXXXXPXXPPXXXXGGGGPPXXXXGXPPPRGXXXXXXPLXXXXXGX 693
+PP P PP GG PP G PPP P G
Sbjct: 314 -RAGSPPPPPPPRGSPPTGSLPPPQ---AGGSPPPAGTGSPPPPPRQKRQAPERSPPTGS 369
Query: 694 XXXXPPP 714
PP
Sbjct: 370 PPTGSPP 376
Score = 29.1 bits (62), Expect = 3.9
Identities = 33/131 (25%), Positives = 34/131 (25%), Gaps = 6/131 (4%)
Frame = +3
Query: 339 RGN-GGFXXXGXGXPXKTPXGGAXXXEXGXTXGGXXGP----GXXXSPXPXFXXKRAXXP 503
+GN GGF T G G T G G G F KR P
Sbjct: 195 QGNQGGFGGQNGQNGQNTGNNGGFGGNQGVTASGFGGQQQGFGQQQQTQNGFRGKRQAPP 254
Query: 504 XKXPXGLXPPXXSXXXKXXXXXPXXXPXXXXGGGGPPXFXXXXPPPP-GXXXXXXXXXXX 680
P PP S P G PP PPPP G
Sbjct: 255 AGSPPPPPPPKGSPPLAGSGSPPPPPA----AGSPPPPRTGSPPPPPTGSPPPPPAGGSP 310
Query: 681 XXGXXXXPPPP 713
PPPP
Sbjct: 311 PPPRAGSPPPP 321
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 647 PRGGGXPXXKXGGPPPPXXXXG 582
P GG P + G PPPP G
Sbjct: 305 PAGGSPPPPRAGSPPPPPPPRG 326
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.2
Identities = 31/127 (24%), Positives = 35/127 (27%), Gaps = 1/127 (0%)
Frame = +1
Query: 337 PGEMGAXPXLGXGXPXKXXGGG-PXLXKXGXPGXXXXXXG*XFPXPPFFXXNXPXXLKKX 513
P G+ P G G P G P + G P P PP + P
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS----PPPPPAGGSPPPP---- 298
Query: 514 XXGXTPPXXPXXXXLXXXXPXXPPXXXXGGGGPPXXXXGXPPPRGXXXXXXPLXXXXXGX 693
+PP P PP GG PP G PPP P G
Sbjct: 299 -RAGSPPPPPPPRGSPPTGSLPPPQ---AGGSPPPAGTGSPPPPPRQKRQAPERSPPTGS 354
Query: 694 XXXXPPP 714
PP
Sbjct: 355 PPTGSPP 361
Score = 29.1 bits (62), Expect = 3.9
Identities = 33/131 (25%), Positives = 34/131 (25%), Gaps = 6/131 (4%)
Frame = +3
Query: 339 RGN-GGFXXXGXGXPXKTPXGGAXXXEXGXTXGGXXGP----GXXXSPXPXFXXKRAXXP 503
+GN GGF T G G T G G G F KR P
Sbjct: 180 QGNQGGFGGQNGQNGQNTGNNGGFGGNQGVTASGFGGQQQGFGQQQQTQNGFRGKRQAPP 239
Query: 504 XKXPXGLXPPXXSXXXKXXXXXPXXXPXXXXGGGGPPXFXXXXPPPP-GXXXXXXXXXXX 680
P PP S P G PP PPPP G
Sbjct: 240 AGSPPPPPPPKGSPPLAGSGSPPPPPA----AGSPPPPRTGSPPPPPTGSPPPPPAGGSP 295
Query: 681 XXGXXXXPPPP 713
PPPP
Sbjct: 296 PPPRAGSPPPP 306
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 647 PRGGGXPXXKXGGPPPPXXXXG 582
P GG P + G PPPP G
Sbjct: 290 PAGGSPPPPRAGSPPPPPPPRG 311
>U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen protein
113 protein.
Length = 348
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +1
Query: 265 ESPRGNTGQIXXXIRVQXPIXFGXPGEMGAXPXLGXGXPXKXXG 396
E P GN G+I R P G PGE G LG P G
Sbjct: 172 EGPPGNPGRIGEHGREGYPGQQGIPGEPGKPGKLGEAGPNGRDG 215
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +3
Query: 330 WXXRGNGGFXXXGXGXPXKTPXGGAXXXEXGXTXGGXXGP 449
W +G GG G G P + GG + G GG GP
Sbjct: 260 WGQQGGGG--QGGWGGPQQQQGGGGWGQQGGGGQGGWGGP 297
>AL032634-3|CAE45092.1| 412|Caenorhabditis elegans Hypothetical
protein Y39G8C.4 protein.
Length = 412
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +2
Query: 494 PXPXKXPXGVXPPXLFXXXKXXGXXXPXXPPXIXGGGGAPXFXXXGPPPPG 646
P P P V PP G PP I GG GAP P PPG
Sbjct: 215 PGPPGPPGPVGPPG---DSGERGNIHEGGPPGIVGGSGAPGVHGI-PGPPG 261
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +3
Query: 330 WXXRGNGGFXXXGXGXPXKTPXGGAXXXEXGXTXGGXXGP 449
W +G GG G G P + GG + G GG GP
Sbjct: 223 WGQQGGGG--QGGWGGPQQQQGGGGWGQQGGGGQGGWGGP 260
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +3
Query: 330 WXXRGNGGFXXXGXGXPXKTPXGGAXXXEXGXTXGGXXGP 449
W +G GG G G P + GG + G GG GP
Sbjct: 222 WGQQGGGG--QGGWGGPQQQQGGGGWGQQGGGGQGGWGGP 259
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +3
Query: 330 WXXRGNGGFXXXGXGXPXKTPXGGAXXXEXGXTXGGXXGP 449
W +G GG G G P + GG + G GG GP
Sbjct: 261 WGQQGGGG--QGGWGGPQQQQGGGGWGQQGGGGQGGWGGP 298
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +3
Query: 330 WXXRGNGGFXXXGXGXPXKTPXGGAXXXEXGXTXGGXXGP 449
W +G GG G G P + GG + G GG GP
Sbjct: 260 WGQQGGGG--QGGWGGPQQQQGGGGWGQQGGGGQGGWGGP 297
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 5.1
Identities = 34/118 (28%), Positives = 36/118 (30%)
Frame = +1
Query: 319 PIXFGXPGEMGAXPXLGXGXPXKXXGGGPXLXKXGXPGXXXXXXG*XFPXPPFFXXNXPX 498
PI G P G P G P GG P + G P P PP P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPIT--GGP-----------PPPP-----PPG 749
Query: 499 XLKKXXXGXTPPXXPXXXXLXXXXPXXPPXXXXGGGGPPXXXXGXPPPRGXXXXXXPL 672
L G PP P P PP GG PP PPP G P+
Sbjct: 750 GLPPISGGPPPPPPPPGGC--PPPPPPPPPGGFKGGPPP------PPPPGMFAPMAPV 799
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 5.1
Identities = 34/118 (28%), Positives = 36/118 (30%)
Frame = +1
Query: 319 PIXFGXPGEMGAXPXLGXGXPXKXXGGGPXLXKXGXPGXXXXXXG*XFPXPPFFXXNXPX 498
PI G P G P G P GG P + G P P PP P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPIT--GGP-----------PPPP-----PPG 749
Query: 499 XLKKXXXGXTPPXXPXXXXLXXXXPXXPPXXXXGGGGPPXXXXGXPPPRGXXXXXXPL 672
L G PP P P PP GG PP PPP G P+
Sbjct: 750 GLPPISGGPPPPPPPPGGC--PPPPPPPPPGGFKGGPPP------PPPPGMFAPMAPV 799
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 5.1
Identities = 34/118 (28%), Positives = 36/118 (30%)
Frame = +1
Query: 319 PIXFGXPGEMGAXPXLGXGXPXKXXGGGPXLXKXGXPGXXXXXXG*XFPXPPFFXXNXPX 498
PI G P G P G P GG P + G P P PP P
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPIT--GGP-----------PPPP-----PPG 332
Query: 499 XLKKXXXGXTPPXXPXXXXLXXXXPXXPPXXXXGGGGPPXXXXGXPPPRGXXXXXXPL 672
L G PP P P PP GG PP PPP G P+
Sbjct: 333 GLPPISGGPPPPPPPPGGC--PPPPPPPPPGGFKGGPPP------PPPPGMFAPMAPV 382
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -3
Query: 642 GGGGPXXXXXGAPPPPXXXGGXXGXXXPQXXXXXXXXGGXTPXGFFXGXGXVXGKKXGXG 463
GGGG PPPP GG G GG G G G G G G
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCG--GGGGGCGGGGGGCG 100
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -3
Query: 642 GGGGPXXXXXGAPPPPXXXGGXXGXXXPQXXXXXXXXGGXTPXGFFXGXGXVXGKKXGXG 463
GGGG PPPP GG G GG G G G G G G
Sbjct: 100 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGG--GGGGGCGGGGGGCG 157
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 6.8
Identities = 34/130 (26%), Positives = 36/130 (27%), Gaps = 1/130 (0%)
Frame = +1
Query: 328 FGXPGEMGAXPXLGXGXPXKXXG-GGPXLXKXGXPGXXXXXXG*XFPXPPFFXXNXPXXL 504
FG P GA P G G P + GGP G P P P F P +
Sbjct: 318 FGAPPPQGA-PQQGFGAPPQGPPQGGPPQGSFGAPPPQQFHA----PSPQSFG-GPPPPV 371
Query: 505 KKXXXGXTPPXXPXXXXLXXXXPXXPPXXXXGGGGPPXXXXGXPPPRGXXXXXXPLXXXX 684
PP P P PP GP PPP G
Sbjct: 372 SSAPGNFAPP--PQSGPPGAFAP--PPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQ 427
Query: 685 XGXXXXXPPP 714
G PPP
Sbjct: 428 GGPGGFGPPP 437
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -3
Query: 642 GGGGPXXXXXGAPPPPXXXGGXXGXXXPQXXXXXXXXGGXTPXGFFXGXGXVXGKKXGXG 463
GGGG G PPP GG G GG G G G G G G
Sbjct: 61 GGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCG--GGGGGCGGGGGGCG 118
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -3
Query: 642 GGGGPXXXXXGAPPPPXXXGGXXGXXXPQXXXXXXXXGGXTPXGFFXGXGXVXGKKXGXG 463
GGGG G PPP GG G GG G G G G G G
Sbjct: 61 GGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCG--GGGGGCGGGGGGCG 118
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +2
Query: 560 GXXXPXXPPXIXGGGGAPXFXXXGPP-PPG 646
G P PP G GGA GPP PPG
Sbjct: 255 GPPGPPGPPGQDGSGGAAQPGPPGPPGPPG 284
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 25.4 bits (53), Expect(2) = 9.3
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = -3
Query: 606 PPPPXXXGGXXGXXXPQXXXXXXXXGGXTP 517
PPPP GG G P GG P
Sbjct: 782 PPPPSFRGGRGGHGGPPPPHFDRRGGGGPP 811
Score = 20.6 bits (41), Expect(2) = 9.3
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 612 GAPPPPXXXG 583
GAPPPP G
Sbjct: 754 GAPPPPFGRG 763
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,640,871
Number of Sequences: 27780
Number of extensions: 315862
Number of successful extensions: 1142
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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