Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_E02
(849 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-l... 207 3e-52
UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck viru... 81 5e-14
UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red ... 71 5e-11
UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat... 63 7e-09
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 59 2e-07
UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent viru... 55 2e-06
UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden death-a... 49 1e-04
UniRef50_P03608 Cluster: Coat protein; n=21; Turnip yellow mosai... 48 2e-04
UniRef50_Q8QY74 Cluster: Coat protein; n=1; Passion fruit yellow... 47 7e-04
UniRef50_O89518 Cluster: Virion protein; n=1; Wild cucumber mosa... 47 7e-04
UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Vir... 45 0.003
UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; ... 44 0.006
UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 42 0.015
UniRef50_P15158 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 40 0.060
UniRef50_A6RDV3 Cluster: Predicted protein; n=1; Ajellomyces cap... 38 0.32
UniRef50_Q6CCA2 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 37 0.74
UniRef50_Q0D9Q0 Cluster: Os06g0704500 protein; n=6; Oryza sativa... 36 0.97
UniRef50_Q5JJ70 Cluster: Hypothetical membrane protein, conserve... 36 1.7
UniRef50_Q5CPV4 Cluster: Large low complexity protein; n=4; Cryp... 35 2.2
UniRef50_Q5KB18 Cluster: Putative uncharacterized protein; n=1; ... 35 3.0
UniRef50_UPI00004DBE76 Cluster: UPI00004DBE76 related cluster; n... 34 3.9
UniRef50_Q9C105 Cluster: Chitinase; n=1; Schizosaccharomyces pom... 34 3.9
UniRef50_Q8BRR2 Cluster: 10 days neonate cortex cDNA, RIKEN full... 34 5.2
UniRef50_A2QU02 Cluster: Similarity: similarities correspond to ... 34 5.2
UniRef50_Q4SSN8 Cluster: Chromosome 15 SCAF14367, whole genome s... 33 6.9
UniRef50_Q3WAL3 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_Q7RY86 Cluster: Putative uncharacterized protein NCU000... 33 6.9
UniRef50_Q5XL24 Cluster: pH-response transcription factor pacC/R... 33 6.9
UniRef50_P08297 Cluster: Early nodulin 75 precursor; n=21; Eukar... 33 6.9
UniRef50_P12351 Cluster: Heme-responsive zinc finger transcripti... 33 6.9
UniRef50_A7E3J6 Cluster: Putative DUX4 protein; n=1; Procavia ca... 33 9.1
UniRef50_Q4FWE6 Cluster: Putative uncharacterized protein; n=3; ... 33 9.1
UniRef50_Q6CGD7 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 33 9.1
UniRef50_O15234 Cluster: Protein CASC3; n=26; Tetrapoda|Rep: Pro... 33 9.1
>UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-like
latent virus|Rep: Coat protein - Bombyx mori Macula-like
latent virus
Length = 237
Score = 207 bits (505), Expect = 3e-52
Identities = 100/103 (97%), Positives = 102/103 (99%)
Frame = +3
Query: 237 QRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
QRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI
Sbjct: 73 QRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 132
Query: 417 PVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLP 545
PVTVDLCWTTADVTVEG NVLATPSS+RIT+GGLALMHQATLP
Sbjct: 133 PVTVDLCWTTADVTVEGFNVLATPSSARITMGGLALMHQATLP 175
Score = 80.2 bits (189), Expect = 6e-14
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = +2
Query: 20 MEEIVPLXVSAASAIPSLVNAFSSSKPPQTDNPSARSMDM 139
MEEIVPL VSAASAIPSLVNAFSSSKPPQTDNPSARSMDM
Sbjct: 1 MEEIVPLVVSAASAIPSLVNAFSSSKPPQTDNPSARSMDM 40
Score = 69.7 bits (163), Expect = 9e-11
Identities = 29/32 (90%), Positives = 30/32 (93%)
Frame = +1
Query: 544 PGDLGYINPIIKSPIPYTNHPRLNIHFHQSPE 639
P DLGYINPIIKSPIPYTNHPRLNIHFHQS +
Sbjct: 175 PCDLGYINPIIKSPIPYTNHPRLNIHFHQSAD 206
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +2
Query: 638 NAVLXGVRAGVKASVVIRGSISVSHPLVTGHG 733
+AVL GVRAGVKASVVIRGSISVSHPLVTGHG
Sbjct: 206 DAVLEGVRAGVKASVVIRGSISVSHPLVTGHG 237
>UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck
virus|Rep: Coat protein - Grapevine fleck virus
Length = 230
Score = 80.6 bits (190), Expect = 5e-14
Identities = 44/115 (38%), Positives = 64/115 (55%)
Frame = +3
Query: 249 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 428
+PFQ L++D+TGTE+ S+++ S P V ++ + YR A L +LEA V P+A S P TV
Sbjct: 68 LPFQFLWYDITGTESSYTSLSIASRPEVVTVARPYRHARLTSLEAFVQPTASSATYPQTV 127
Query: 429 DLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPWRSRLHQPDHQIPDSI 593
DLCWT VT +L+ + RI G + LP + L + I DS+
Sbjct: 128 DLCWTIDSVTPARSEILSVFGAQRIAWGSVHFSAPILLP--AELSSLNPTIKDSV 180
>UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red
Globe virus|Rep: 25kDa coat protein - Grapevine Red
Globe virus
Length = 235
Score = 70.5 bits (165), Expect = 5e-11
Identities = 33/89 (37%), Positives = 51/89 (57%)
Frame = +3
Query: 249 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 428
+PFQ +++DLT ET S+ + S P S+ Y A L +LE VFP PS P++
Sbjct: 71 LPFQFIFYDLTNAETGFTSLDLASKPPFLSLTSPYAYAVLQSLELTVFPKNPSYTYPMSF 130
Query: 429 DLCWTTADVTVEGVNVLATPSSSRITIGG 515
D W ++ V++ G +L+T +R+T GG
Sbjct: 131 DAHWHSSSVSITGSQILSTYGGTRVTFGG 159
Score = 35.9 bits (79), Expect = 1.3
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 544 PGDLGYINPIIKSPIPYTNHPRLNIHFHQSPE 639
P DL NP++K + Y N P+L + FH++ +
Sbjct: 170 PADLRSTNPVVKDTVSYNNTPKLTVAFHKNTD 201
>UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat
protein - Ononis yellow mosaic virus
Length = 192
Score = 63.3 bits (147), Expect = 7e-09
Identities = 38/117 (32%), Positives = 61/117 (52%)
Frame = +3
Query: 243 LIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPV 422
+++PFQ DL G S +T+ S P ++ + YR A +V EAV+FP++ S K PV
Sbjct: 32 MVVPFQVSVSDL-GVSEVSAQITLSSDPTLAQLTSIYRMASIVECEAVLFPNSTSSKNPV 90
Query: 423 TVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPWRSRLHQPDHQIPDSI 593
DL W ++ + +L T +R T+GG +Q + + RL + I DS+
Sbjct: 91 HCDLIWVPSNSSASPKTILQTYGGNRFTVGGPITSNQ-IISFPLRLDSVNPIIKDSV 146
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 58.8 bits (136), Expect = 2e-07
Identities = 36/115 (31%), Positives = 58/115 (50%)
Frame = +3
Query: 249 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 428
+PFQ + D+ + + + ++S I YR A L L+A+V P+A S + P+T+
Sbjct: 1820 VPFQTVAMDVVAAGGNA-TFNLAGHVSLSEITAPYRKARLAELKAIVCPTAASFQSPITL 1878
Query: 429 DLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPWRSRLHQPDHQIPDSI 593
DL W+T +V + +L +R IGG L H T R+ L + I DS+
Sbjct: 1879 DLVWSTNNVIFTDLQILQVYGGTRFAIGGPLLSH--TYELRADLSYLNPVIKDSV 1931
>UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent
virus|Rep: Coat protein - Erysimum latent virus (ELV)
Length = 202
Score = 55.2 bits (127), Expect = 2e-06
Identities = 30/88 (34%), Positives = 46/88 (52%)
Frame = +3
Query: 252 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 431
PFQ F L + S ++ + + P +++ + +R A L L AVV PSA S+ P+TV
Sbjct: 46 PFQ-FEFPLPAGQEGSVTLPLATFPKMATFLSRHRRAQLTQLHAVVSPSAVSIGHPLTVQ 104
Query: 432 LCWTTADVTVEGVNVLATPSSSRITIGG 515
L W A T +L T +I++GG
Sbjct: 105 LIWVPASSTTTSSQILGTYGGQQISVGG 132
>UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden
death-associated virus|Rep: Polyprotein - Citrus sudden
death-associated virus
Length = 2189
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/96 (27%), Positives = 44/96 (45%)
Frame = +3
Query: 252 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 431
PFQ + G+E K+ S + ++ ++ YR A L ++E V P A + P++V
Sbjct: 2034 PFQWVVASYDGSEAKNLSDDLSGSATLTKVMANYRHAELTSVELEVCPLAAAFSKPISVS 2093
Query: 432 LCWTTADVTVEGVNVLATPSSSRITIGGLALMHQAT 539
WT A ++ + + T+GG LM T
Sbjct: 2094 AVWTIASISPASASETSYYGGRLFTVGGPVLMSSTT 2129
>UniRef50_P03608 Cluster: Coat protein; n=21; Turnip yellow mosaic
virus|Rep: Coat protein - Turnip yellow mosaic virus
Length = 189
Score = 48.4 bits (110), Expect = 2e-04
Identities = 32/114 (28%), Positives = 53/114 (46%)
Frame = +3
Query: 252 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 431
PFQ GT+ S+T+ ++ +VS++ YR A L +L + P+ + P TV
Sbjct: 34 PFQSEVL-FAGTKDAEASLTIANIDSVSTLTTFYRHASLESLWVTIHPTLQAPTFPTTVG 92
Query: 432 LCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPWRSRLHQPDHQIPDSI 593
+CW A+ V + T IGG A+ + L + L + ++ DSI
Sbjct: 93 VCWVPANSPVTPAQITKTYGGQIFCIGG-AINTLSPLIVKCPLEMMNPRVKDSI 145
>UniRef50_Q8QY74 Cluster: Coat protein; n=1; Passion fruit yellow
mosaic virus|Rep: Coat protein - Passion fruit yellow
mosaic virus
Length = 188
Score = 46.8 bits (106), Expect = 7e-04
Identities = 30/89 (33%), Positives = 42/89 (47%)
Frame = +3
Query: 249 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 428
+PFQ L GT S+SV++ + VSS+ YR A L +L A + P+ S P TV
Sbjct: 37 LPFQTKLASL-GTAEVSDSVSIAANAAVSSLATPYRHARLTSLVATIHPNHLSPSNPTTV 95
Query: 429 DLCWTTADVTVEGVNVLATPSSSRITIGG 515
L W + T ++L IGG
Sbjct: 96 SLVWVPFNSTATSSDILNVFGGQSFCIGG 124
>UniRef50_O89518 Cluster: Virion protein; n=1; Wild cucumber mosaic
virus|Rep: Virion protein - Wild cucumber mosaic virus
Length = 188
Score = 46.8 bits (106), Expect = 7e-04
Identities = 21/78 (26%), Positives = 41/78 (52%)
Frame = +3
Query: 282 GTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTV 461
G + S+ +++ S P + + +R A L++ +A++ P + +P+TVDL W +A+
Sbjct: 44 GPKEVSSQISLSSCPELLRLTSLFRHARLLSAKAIITPFDGVVSLPITVDLAWVSANSPA 103
Query: 462 EGVNVLATPSSSRITIGG 515
++L S T GG
Sbjct: 104 SPTDILKIYGGSSYTFGG 121
>UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Virion
protein - Dulcamara mottle virus
Length = 188
Score = 44.8 bits (101), Expect = 0.003
Identities = 22/70 (31%), Positives = 37/70 (52%)
Frame = +3
Query: 306 VTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLAT 485
V++ + +++ + GYR A LV L + P+ ++ PVTVD+ W A+ T +L+
Sbjct: 52 VSLSASESLAKLTAGYRRAKLVELFLTITPTQLAIDNPVTVDVVWVPANSTATPSKILSV 111
Query: 486 PSSSRITIGG 515
R IGG
Sbjct: 112 YGGQRFLIGG 121
>UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; Oat
blue dwarf virus|Rep: Replicase-associated polyprotein -
Oat blue dwarf virus
Length = 2066
Score = 43.6 bits (98), Expect = 0.006
Identities = 26/97 (26%), Positives = 40/97 (41%)
Frame = +3
Query: 249 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 428
+PFQ G K + + ++S + GYR A L++ E P A + P++V
Sbjct: 1908 VPFQWAVASYAGDSAKFLTDDLSGSSHLSRLTIGYRHAELISAELEFAPLAAAFAKPISV 1967
Query: 429 DLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQAT 539
WT A + L +T+GG LM T
Sbjct: 1968 TAVWTIASIAPATTTELQYYGGRLLTLGGPVLMGSVT 2004
>UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Cacao yellow mosaic virus
Length = 188
Score = 42.3 bits (95), Expect = 0.015
Identities = 22/91 (24%), Positives = 42/91 (46%)
Frame = +3
Query: 243 LIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPV 422
++ PFQ L G E ++ V++ + +++ YR A L +L+A++ P+ + P
Sbjct: 31 IVYPFQFTIASL-GVEPTADFVSIAAQAAITAYTSLYRHAILTDLQAIIHPNGYAPAFPT 89
Query: 423 TVDLCWTTADVTVEGVNVLATPSSSRITIGG 515
+V L W + T +L +GG
Sbjct: 90 SVALAWVPYNSTATAAKILDVFGGQEFCVGG 120
>UniRef50_P15158 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Belladonna mottle virus (BMDV)
Length = 190
Score = 40.3 bits (90), Expect = 0.060
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Frame = +3
Query: 243 LIIPFQRLYFDLT--GTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+++PFQ F+ T GT + V++Q+ ++ + YR A +V +A++ P+ ++
Sbjct: 32 IVLPFQ---FEATTFGTAETAAQVSLQTADPITKLTAPYRHAQIVECKAILTPTDLAVSN 88
Query: 417 PVTVDLCWTTAD--VTVEGVNVLATPSSSRITIGGLALMHQATLPWRSRLHQPDHQIPDS 590
P+TV L W A+ T + L +GG A+ T+ L + + DS
Sbjct: 89 PLTVYLAWVPANSPATPTQILKLRVYGGQSFVLGG-AISAAKTIEVPLNLDSVNRMLKDS 147
Query: 591 I 593
+
Sbjct: 148 V 148
>UniRef50_A6RDV3 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 250
Score = 37.9 bits (84), Expect = 0.32
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +2
Query: 533 SHPPLAISATSTRSSNPRFHTPTTPDLTSISINPLN 640
+HPPL+ + T+T S+ RFH P+ P L+S + NP++
Sbjct: 17 AHPPLSTAKTTTLISSRRFHLPSLPSLSSFT-NPIS 51
>UniRef50_Q6CCA2 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 911
Score = 36.7 bits (81), Expect = 0.74
Identities = 23/89 (25%), Positives = 36/89 (40%)
Frame = +3
Query: 273 DLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTAD 452
DLT T T + + + A + A++ P+A +L +P DL T D
Sbjct: 515 DLTTTATDLTTTATDLTTTATDLTVPTVTALMETATALMVPTATALMVPTATDLTTTATD 574
Query: 453 VTVEGVNVLATPSSSRITIGGLALMHQAT 539
+T T + + +T ALM AT
Sbjct: 575 LTTTATATDLTTTVTDLTTTATALMETAT 603
Score = 33.9 bits (74), Expect = 5.2
Identities = 19/81 (23%), Positives = 39/81 (48%)
Frame = +3
Query: 297 SNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNV 476
+ + T ++P V+++++ + A++ P+A L +P DL T D+T +
Sbjct: 662 TTTATDLTVPTVTALMETATALMVPTATALMVPTATDLMVPTATDLTTTVTDLTTTATAL 721
Query: 477 LATPSSSRITIGGLALMHQAT 539
+ T ++ + ALM AT
Sbjct: 722 METATALTVPT-ATALMETAT 741
>UniRef50_Q0D9Q0 Cluster: Os06g0704500 protein; n=6; Oryza
sativa|Rep: Os06g0704500 protein - Oryza sativa subsp.
japonica (Rice)
Length = 409
Score = 36.3 bits (80), Expect = 0.97
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 573 HQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLTPS-SLGMAKGVSP 749
H+ P H PP+ P P P +P P PP SE+P + + PS S + G SP
Sbjct: 252 HRSPLPHHMPPRRTPPTPPPPSSPTPSHLPP--PPPTYSESPKSSMPPSTSPPSSHGASP 309
Query: 750 P 752
P
Sbjct: 310 P 310
>UniRef50_Q5JJ70 Cluster: Hypothetical membrane protein, conserved;
n=1; Thermococcus kodakarensis KOD1|Rep: Hypothetical
membrane protein, conserved - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 541
Score = 35.5 bits (78), Expect = 1.7
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +3
Query: 327 NVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRI 503
NVS +KG ++ Y V+ VV P SL + +D ++ + TVE +T S SR+
Sbjct: 180 NVSLSVKGVKELYSVSKSMVVAPGYSSLVFEIPIDSKYSEGEYTVELAVRCSTTSVSRL 238
>UniRef50_Q5CPV4 Cluster: Large low complexity protein; n=4;
Cryptosporidium|Rep: Large low complexity protein -
Cryptosporidium parvum Iowa II
Length = 1667
Score = 35.1 bits (77), Expect = 2.2
Identities = 22/58 (37%), Positives = 24/58 (41%)
Frame = +3
Query: 564 QPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLTPSSLGMAK 737
QP QIP +PP P P IP PY K P PP + P Y P S K
Sbjct: 1477 QPKPQIPPPYQKPPSYPQPKPQIP-PPYQK---PPSYPPSKPQIPPPYQKPPSYPQPK 1530
>UniRef50_Q5KB18 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 541
Score = 34.7 bits (76), Expect = 3.0
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +3
Query: 555 RLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLTPSSLGMA 734
+++ P Q P + PP + P+PS P T AP P SS SAY TP +
Sbjct: 407 QVYYPPPQPPTARPPPPLSAQPYPSYPQTAMPAN-APMYPPRRSSSPNSAYRTPQTASYP 465
Query: 735 KGVSPPYFQV 764
+SP +Q+
Sbjct: 466 --ISPTEYQM 473
>UniRef50_UPI00004DBE76 Cluster: UPI00004DBE76 related cluster; n=2;
Xenopus tropicalis|Rep: UPI00004DBE76 UniRef100 entry -
Xenopus tropicalis
Length = 618
Score = 34.3 bits (75), Expect = 3.9
Identities = 29/90 (32%), Positives = 38/90 (42%)
Frame = +3
Query: 483 TPSSSRITIGGLALMHQATLPWRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFA 662
TP S+R T G A P + L P P + +PP P PS P E
Sbjct: 506 TPGSAR-TPGSARTPGSARTP--AALEPPAALEPPAALEPPAALEP-PSALEPPSALEPP 561
Query: 663 PGLKPPLSSEAPSAYLTPSSLGMAKGVSPP 752
L+PP + E P+A PS+L + PP
Sbjct: 562 AALEPPAALEPPAALEPPSALEPPAALEPP 591
>UniRef50_Q9C105 Cluster: Chitinase; n=1; Schizosaccharomyces
pombe|Rep: Chitinase - Schizosaccharomyces pombe
(Fission yeast)
Length = 1236
Score = 34.3 bits (75), Expect = 3.9
Identities = 22/67 (32%), Positives = 28/67 (41%)
Frame = +2
Query: 524 YASSHPPLAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLXGVRAGVKASVVIRGSIS 703
Y SS IS +ST N FH PT TS S A GV + S+ + + S
Sbjct: 795 YLSSSSSRTISTSSTNEYNTSFHAPTVSSTTSSSSTTSLAANKGVNSNSITSLNLESTSS 854
Query: 704 VSHPLVT 724
V+ T
Sbjct: 855 VTSTAYT 861
>UniRef50_Q8BRR2 Cluster: 10 days neonate cortex cDNA, RIKEN
full-length enriched library, clone:A830021G02
product:hypothetical protein, full insert sequence; n=2;
Mus musculus|Rep: 10 days neonate cortex cDNA, RIKEN
full-length enriched library, clone:A830021G02
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 150
Score = 33.9 bits (74), Expect = 5.2
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Frame = +3
Query: 549 RSRLHQPD---HQIPDSIHQPPQT*HPFPSIP*TPYXK--EFAPGLKPPLSSEAP--SAY 707
R RL P H +PD + P PFP+ P P K +++ +PP S P S
Sbjct: 52 RQRLSAPGARRHALPDEVRGEPGVPRPFPAEPADPGKKRRQWSSRCRPPASCRVPARSPA 111
Query: 708 LTPSSLGMAKG 740
LT S+L +G
Sbjct: 112 LTTSALFPGRG 122
>UniRef50_A2QU02 Cluster: Similarity: similarities correspond to
multiple threonine and proline residues; n=2;
Aspergillus|Rep: Similarity: similarities correspond to
multiple threonine and proline residues - Aspergillus
niger
Length = 699
Score = 33.9 bits (74), Expect = 5.2
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2
Query: 536 HPPLAISATSTRSSNPRFHTPTTPDL 613
HPP A TSTR+SNP HTP P L
Sbjct: 32 HPPKA--TTSTRTSNPAAHTPNQPPL 55
>UniRef50_Q4SSN8 Cluster: Chromosome 15 SCAF14367, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 15 SCAF14367, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1031
Score = 33.5 bits (73), Expect = 6.9
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 567 PDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVS 746
PD P ++ +PP P P P +F+P + PPL + PS + G
Sbjct: 407 PDSPTPTTLERPP------PDEPAPPLPPDFSPSISPPLCLHDDAIDEEPSGALLGSGSH 460
Query: 747 PPY 755
PP+
Sbjct: 461 PPW 463
>UniRef50_Q3WAL3 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. EAN1pec|Rep: Putative uncharacterized
protein - Frankia sp. EAN1pec
Length = 154
Score = 33.5 bits (73), Expect = 6.9
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Frame = +3
Query: 537 TLPWRSRLHQPDHQIPDS---IHQPPQT*HPFPSIP*TPYXK---EFAPGLKPP 680
T P LH+PDHQ PD HQ P P PS P P + + P +PP
Sbjct: 53 TAPRGPALHKPDHQRPDDQQPDHQRPNPHRPVPSDPQEPAERMRAAWTPTRQPP 106
>UniRef50_Q7RY86 Cluster: Putative uncharacterized protein
NCU00019.1; n=2; Sordariales|Rep: Putative
uncharacterized protein NCU00019.1 - Neurospora crassa
Length = 688
Score = 33.5 bits (73), Expect = 6.9
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +3
Query: 582 PDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPP 752
PDS P Q HP PS + + +P K ++ P L P+ +GV+PP
Sbjct: 236 PDSQVSPRQARHPLPSAGESHAFQAVSPTSKAAPRNQGPQKALAPAPPDYRRGVTPP 292
>UniRef50_Q5XL24 Cluster: pH-response transcription factor
pacC/RIM101; n=15; Pezizomycotina|Rep: pH-response
transcription factor pacC/RIM101 - Aspergillus giganteus
Length = 678
Score = 33.5 bits (73), Expect = 6.9
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = +3
Query: 561 HQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLTPSSLGMAKG 740
H P Q+P S + S P T P L PP S+++ ++ +P S+ A
Sbjct: 390 HSPPSQLPPSHATATTSAATMMSHPATHSPSTGTPALTPPSSAQSYTSGRSPISMSSAHR 449
Query: 741 VSPPY 755
VSPP+
Sbjct: 450 VSPPH 454
>UniRef50_P08297 Cluster: Early nodulin 75 precursor; n=21;
Eukaryota|Rep: Early nodulin 75 precursor - Glycine max
(Soybean)
Length = 309
Score = 33.5 bits (73), Expect = 6.9
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +3
Query: 561 HQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLTP 716
+QP H+ P HQPP P P P PY K P +PP P Y P
Sbjct: 229 YQPPHEKPPPEHQPPHE-KPPPVYP-PPYEKP-PPVYEPPYEKPPPVVYPPP 277
>UniRef50_P12351 Cluster: Heme-responsive zinc finger transcription
factor HAP1; n=3; Saccharomyces cerevisiae|Rep:
Heme-responsive zinc finger transcription factor HAP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 1483
Score = 33.5 bits (73), Expect = 6.9
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 521 PYASSHPPLAISATSTRSSNPRFHTPTTPDLTSISINP 634
PY SS P +A S+ S +P HT TTP + S +P
Sbjct: 5 PYNSSVPSIASMTQSSVSRSPNMHTATTPGANTSSNSP 42
>UniRef50_A7E3J6 Cluster: Putative DUX4 protein; n=1; Procavia
capensis|Rep: Putative DUX4 protein - Procavia capensis
(Cape hyrax) (Rock dassie)
Length = 481
Score = 33.1 bits (72), Expect = 9.1
Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 663 PGLKPPLSSEAPSAYLT-PSSLGMAKGVSPP 752
PG + P EAPSA T PSS MA G++PP
Sbjct: 303 PGPRAPAGGEAPSAPQTLPSSQPMANGLAPP 333
>UniRef50_Q4FWE6 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 800
Score = 33.1 bits (72), Expect = 9.1
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 462 EGVNVLATPSSSRITIGGLALMHQATLPWRSRLHQPDHQIPDSIHQ 599
EG P+S + GGLA + A RLH+ H++P+ + Q
Sbjct: 611 EGRGSARRPASHEVAKGGLAALRDAASAKNGRLHRDPHRLPNRVLQ 656
>UniRef50_Q6CGD7 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 800
Score = 33.1 bits (72), Expect = 9.1
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Frame = +3
Query: 483 TPSSSRITIGGLALMHQATLPWRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*T---PYXK 653
TP+ S +I A SR P P P Q P P +P T P
Sbjct: 185 TPARSTTSIVSTASTATTASSSSSRPRAPAQAPPPP---PTQAAPPVPGVPSTTHRPPPP 241
Query: 654 EFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQVNDES 776
AP PPL ++A A+ TP++ + SPP ++ ES
Sbjct: 242 AQAPPPPPPLGNQA-QAHPTPAATTTPRPESPPLITISSES 281
>UniRef50_O15234 Cluster: Protein CASC3; n=26; Tetrapoda|Rep:
Protein CASC3 - Homo sapiens (Human)
Length = 703
Score = 33.1 bits (72), Expect = 9.1
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = +3
Query: 534 ATLPWRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLT 713
A LP + L QP +P P QT P P+ P +PG PP AP+ +
Sbjct: 565 APLPPQGMLVQPGMNLPHPGLHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSA 624
Query: 714 PSSLGMAKGVSPPY 755
P + S PY
Sbjct: 625 PGVMNFG-NPSYPY 637
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 802,428,069
Number of Sequences: 1657284
Number of extensions: 16593543
Number of successful extensions: 54254
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 50207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54096
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74603367202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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