Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_E02
(849 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U73825-1|AAB95090.1| 465|Homo sapiens Smad5 protein. 34 0.57
CR457424-1|CAG33705.1| 465|Homo sapiens MADH5 protein. 34 0.57
BC009682-1|AAH09682.1| 465|Homo sapiens SMAD family member 5 pr... 34 0.57
AF010601-1|AAB66353.1| 465|Homo sapiens SMAD5 protein. 34 0.57
AF009744-1|AAB82655.1| 462|Homo sapiens Mad homolog protein. 34 0.57
AF009678-1|AAB72180.1| 465|Homo sapiens Smad5 protein. 34 0.57
X80199-1|CAC27699.1| 703|Homo sapiens MLN51 protein. 33 1.3
BC050526-1|AAH50526.1| 703|Homo sapiens cancer susceptibility c... 33 1.3
BC044656-1|AAH44656.1| 703|Homo sapiens cancer susceptibility c... 33 1.3
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 4.0
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 4.0
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 4.0
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 4.0
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 4.0
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 4.0
AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X menta... 31 4.0
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 4.0
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 4.0
AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X menta... 31 4.0
AK054581-1|BAB70764.1| 262|Homo sapiens protein ( Homo sapiens ... 31 4.0
AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interactin... 31 4.0
BC106932-1|AAI06933.1| 446|Homo sapiens AMBN protein protein. 30 9.2
BC106931-1|AAI06932.1| 447|Homo sapiens ameloblastin (enamel ma... 30 9.2
AY009124-1|AAG27036.1| 447|Homo sapiens ameloblastin protein. 30 9.2
AJ537437-1|CAD60938.1| 447|Homo sapiens ameloblastin precursor ... 30 9.2
AF263464-1|AAF73048.1| 447|Homo sapiens ameloblastin protein. 30 9.2
AF219994-1|AAF37355.1| 447|Homo sapiens ameloblastin protein. 30 9.2
AF209780-1|AAG35772.1| 447|Homo sapiens ameloblastin precursor ... 30 9.2
>U73825-1|AAB95090.1| 465|Homo sapiens Smad5 protein.
Length = 465
Score = 34.3 bits (75), Expect = 0.57
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Frame = +3
Query: 561 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP--PLSSEAPSAYLTPSSLGM 731
H P + PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADTPP 223
Query: 732 AKGVSPPYFQVNDESQ 779
+ P D SQ
Sbjct: 224 PAYMPPDDQMGQDNSQ 239
>CR457424-1|CAG33705.1| 465|Homo sapiens MADH5 protein.
Length = 465
Score = 34.3 bits (75), Expect = 0.57
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Frame = +3
Query: 561 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP--PLSSEAPSAYLTPSSLGM 731
H P + PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSAYPNSPASSGPGSPFQLPADTPP 223
Query: 732 AKGVSPPYFQVNDESQ 779
+ P D SQ
Sbjct: 224 PAYMPPDDQMGQDNSQ 239
>BC009682-1|AAH09682.1| 465|Homo sapiens SMAD family member 5
protein.
Length = 465
Score = 34.3 bits (75), Expect = 0.57
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Frame = +3
Query: 561 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP--PLSSEAPSAYLTPSSLGM 731
H P + PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADTPP 223
Query: 732 AKGVSPPYFQVNDESQ 779
+ P D SQ
Sbjct: 224 PAYMPPDDQMGQDNSQ 239
>AF010601-1|AAB66353.1| 465|Homo sapiens SMAD5 protein.
Length = 465
Score = 34.3 bits (75), Expect = 0.57
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Frame = +3
Query: 561 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP--PLSSEAPSAYLTPSSLGM 731
H P + PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADTPP 223
Query: 732 AKGVSPPYFQVNDESQ 779
+ P D SQ
Sbjct: 224 PAYMPPDDQMGQDNSQ 239
>AF009744-1|AAB82655.1| 462|Homo sapiens Mad homolog protein.
Length = 462
Score = 34.3 bits (75), Expect = 0.57
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Frame = +3
Query: 561 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP--PLSSEAPSAYLTPSSLGM 731
H P + PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 163 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADTPP 220
Query: 732 AKGVSPPYFQVNDESQ 779
+ P D SQ
Sbjct: 221 PAYMPPDDQMGQDNSQ 236
>AF009678-1|AAB72180.1| 465|Homo sapiens Smad5 protein.
Length = 465
Score = 34.3 bits (75), Expect = 0.57
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Frame = +3
Query: 561 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKP--PLSSEAPSAYLTPSSLGM 731
H P + PDS HQP T PFP P +PY A P P SS S + P+
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADTPP 223
Query: 732 AKGVSPPYFQVNDESQ 779
+ P D SQ
Sbjct: 224 PAYMPPDDQMGQDNSQ 239
>X80199-1|CAC27699.1| 703|Homo sapiens MLN51 protein.
Length = 703
Score = 33.1 bits (72), Expect = 1.3
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = +3
Query: 534 ATLPWRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLT 713
A LP + L QP +P P QT P P+ P +PG PP AP+ +
Sbjct: 565 APLPPQGMLVQPGMNLPHPGLHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSA 624
Query: 714 PSSLGMAKGVSPPY 755
P + S PY
Sbjct: 625 PGVMNFG-NPSYPY 637
>BC050526-1|AAH50526.1| 703|Homo sapiens cancer susceptibility
candidate 3 protein.
Length = 703
Score = 33.1 bits (72), Expect = 1.3
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = +3
Query: 534 ATLPWRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLT 713
A LP + L QP +P P QT P P+ P +PG PP AP+ +
Sbjct: 565 APLPPQGMLVQPGMNLPHPGLHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSA 624
Query: 714 PSSLGMAKGVSPPY 755
P + S PY
Sbjct: 625 PGVMNFG-NPSYPY 637
>BC044656-1|AAH44656.1| 703|Homo sapiens cancer susceptibility
candidate 3 protein.
Length = 703
Score = 33.1 bits (72), Expect = 1.3
Identities = 23/74 (31%), Positives = 30/74 (40%)
Frame = +3
Query: 534 ATLPWRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLT 713
A LP + L QP +P P QT P P+ P +PG PP AP+ +
Sbjct: 565 APLPPQGMLVQPGMNLPHPGLHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSA 624
Query: 714 PSSLGMAKGVSPPY 755
P + S PY
Sbjct: 625 PGVMNFG-NPSYPY 637
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 1 protein.
Length = 495
Score = 31.5 bits (68), Expect = 4.0
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 582 PDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAP 698
P S QPP P P P+ + PG +PP +++P
Sbjct: 61 PSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 1 protein.
Length = 495
Score = 31.5 bits (68), Expect = 4.0
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 582 PDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAP 698
P S QPP P P P+ + PG +PP +++P
Sbjct: 61 PSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>AK054581-1|BAB70764.1| 262|Homo sapiens protein ( Homo sapiens
cDNA FLJ30019 fis, clone 3NB692000545. ).
Length = 262
Score = 31.5 bits (68), Expect = 4.0
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 597 QPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAPSAYLTPSSL 725
+PP + PFP +P +P FAP L+PP +AP + P L
Sbjct: 85 RPPSS--PFPPVPGSP----FAPSLRPPAWMDAPRLPVRPGVL 121
>AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interacting
protein 1 protein.
Length = 495
Score = 31.5 bits (68), Expect = 4.0
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 582 PDSIHQPPQT*HPFPSIP*TPYXKEFAPGLKPPLSSEAP 698
P S QPP P P P+ + PG +PP +++P
Sbjct: 61 PSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>BC106932-1|AAI06933.1| 446|Homo sapiens AMBN protein protein.
Length = 446
Score = 30.3 bits (65), Expect = 9.2
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +3
Query: 489 SSSRITIGGLALMHQATLPWRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPG 668
S + + + GL H ++LPW + +H+ + P HP P +P P K PG
Sbjct: 70 SFNSLWMHGLLPPH-SSLPW---MRPREHETQQYEYSLPV--HP-PPLPSQPSLKPQQPG 122
Query: 669 LKPPLSSEAPSAYLTPSSLGMAKGVSPP 752
LKP L S A + T + + + + PP
Sbjct: 123 LKPFLQSAAAT---TNQATALKEALQPP 147
>BC106931-1|AAI06932.1| 447|Homo sapiens ameloblastin (enamel
matrix protein) protein.
Length = 447
Score = 30.3 bits (65), Expect = 9.2
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +3
Query: 489 SSSRITIGGLALMHQATLPWRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPG 668
S + + + GL H ++LPW + +H+ + P HP P +P P K PG
Sbjct: 70 SFNSLWMHGLLPPH-SSLPW---MRPREHETQQYEYSLPV--HP-PPLPSQPSLKPQQPG 122
Query: 669 LKPPLSSEAPSAYLTPSSLGMAKGVSPP 752
LKP L S A + T + + + + PP
Sbjct: 123 LKPFLQSAAAT---TNQATALKEALQPP 147
>AY009124-1|AAG27036.1| 447|Homo sapiens ameloblastin protein.
Length = 447
Score = 30.3 bits (65), Expect = 9.2
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +3
Query: 489 SSSRITIGGLALMHQATLPWRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPG 668
S + + + GL H ++LPW + +H+ + P HP P +P P K PG
Sbjct: 70 SFNSLWMHGLLPPH-SSLPW---MRPREHETQQYEYSLPV--HP-PPLPSQPSLKPQQPG 122
Query: 669 LKPPLSSEAPSAYLTPSSLGMAKGVSPP 752
LKP L S A + T + + + + PP
Sbjct: 123 LKPFLQSAAAT---TNQATALKEALQPP 147
>AJ537437-1|CAD60938.1| 447|Homo sapiens ameloblastin precursor
protein.
Length = 447
Score = 30.3 bits (65), Expect = 9.2
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +3
Query: 489 SSSRITIGGLALMHQATLPWRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPG 668
S + + + GL H ++LPW + +H+ + P HP P +P P K PG
Sbjct: 70 SFNSLWMHGLLPPH-SSLPW---MRPREHETQQYEYSLPV--HP-PPLPSQPSLKPQQPG 122
Query: 669 LKPPLSSEAPSAYLTPSSLGMAKGVSPP 752
LKP L S A + T + + + + PP
Sbjct: 123 LKPFLQSAAAT---TNQATALKEALQPP 147
>AF263464-1|AAF73048.1| 447|Homo sapiens ameloblastin protein.
Length = 447
Score = 30.3 bits (65), Expect = 9.2
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +3
Query: 489 SSSRITIGGLALMHQATLPWRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPG 668
S + + + GL H ++LPW + +H+ + P HP P +P P K PG
Sbjct: 70 SFNSLWMHGLLPPH-SSLPW---MRPREHETQQYEYSLPV--HP-PPLPSQPSLKPQQPG 122
Query: 669 LKPPLSSEAPSAYLTPSSLGMAKGVSPP 752
LKP L S A + T + + + + PP
Sbjct: 123 LKPFLQSAAAT---TNQATALKEALQPP 147
>AF219994-1|AAF37355.1| 447|Homo sapiens ameloblastin protein.
Length = 447
Score = 30.3 bits (65), Expect = 9.2
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +3
Query: 489 SSSRITIGGLALMHQATLPWRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPG 668
S + + + GL H ++LPW + +H+ + P HP P +P P K PG
Sbjct: 70 SFNSLWMHGLLPPH-SSLPW---MRPREHETQQYEYSLPV--HP-PPLPSQPSLKPQQPG 122
Query: 669 LKPPLSSEAPSAYLTPSSLGMAKGVSPP 752
LKP L S A + T + + + + PP
Sbjct: 123 LKPFLQSAAAT---TNQATALKEALQPP 147
>AF209780-1|AAG35772.1| 447|Homo sapiens ameloblastin precursor
protein.
Length = 447
Score = 30.3 bits (65), Expect = 9.2
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +3
Query: 489 SSSRITIGGLALMHQATLPWRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPYXKEFAPG 668
S + + + GL H ++LPW + +H+ + P HP P +P P K PG
Sbjct: 70 SFNSLWMHGLLPPH-SSLPW---MRPREHETQQYEYSLPV--HP-PPLPSQPSLKPQQPG 122
Query: 669 LKPPLSSEAPSAYLTPSSLGMAKGVSPP 752
LKP L S A + T + + + + PP
Sbjct: 123 LKPFLQSAAAT---TNQATALKEALQPP 147
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,438,185
Number of Sequences: 237096
Number of extensions: 2640872
Number of successful extensions: 6860
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 6284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6858
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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