Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_D24
         (917 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   2.5  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   2.5  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    23   2.5  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    23   2.5  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    23   2.5  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   2.5  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   2.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   4.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   5.8  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 371 AGQEGVNIICFQEWWNMPFA 430
           A Q  + +  +Q WW +PFA
Sbjct: 263 ARQIALTVPRYQAWWYLPFA 282


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 371 AGQEGVNIICFQEWWNMPFA 430
           A Q  + +  +Q WW +PFA
Sbjct: 263 ARQIALTVPRYQAWWYLPFA 282


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 371 AGQEGVNIICFQEWWNMPFA 430
           A Q  + +  +Q WW +PFA
Sbjct: 263 ARQIALTVPRYQAWWYLPFA 282


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 371 AGQEGVNIICFQEWWNMPFA 430
           A Q  + +  +Q WW +PFA
Sbjct: 263 ARQIALTVPRYQAWWYLPFA 282


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 371 AGQEGVNIICFQEWWNMPFA 430
           A Q  + +  +Q WW +PFA
Sbjct: 263 ARQIALTVPRYQAWWYLPFA 282


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 564 RSIRTYFGTLRVVISDPGNVI 626
           + + +Y+   RV++S PGNV+
Sbjct: 124 QQMSSYYNESRVMMSPPGNVL 144


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 564 RSIRTYFGTLRVVISDPGNVI 626
           + + +Y+   RV++S PGNV+
Sbjct: 124 QQMSSYYNESRVMMSPPGNVL 144


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +2

Query: 467  AESAEDGPTTTFLRELAIKYAMVIVSSILERDEKHSDILWNXAG 598
            AE    GP T+   E   ++++V+      R+E + DIL    G
Sbjct: 991  AEEVPGGPPTSIRVETNDQHSLVVYWKPPAREEWNGDILGYYVG 1034


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = -3

Query: 405 WKQMMLTPSWPATSMIFLTLLKIAFFCSLTGRSVGTAMEC 286
           WK    T  +    + F+ LL I+FF +       T   C
Sbjct: 124 WKSYKRTQIFITCELFFVILLWISFFLNFMLHCNNTTWRC 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,174
Number of Sequences: 336
Number of extensions: 3321
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25651384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)