Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_D24
         (917 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...   157   1e-38
U21317-10|AAA62529.1|  753|Caenorhabditis elegans Hypothetical p...    29   4.7  
Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score =  157 bits (380), Expect = 1e-38
 Identities = 90/201 (44%), Positives = 116/201 (57%), Gaps = 2/201 (0%)
 Frame = +2

Query: 74  LESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXF--PAKDEQ 247
           +E+ +   L G  L+E  RI +GR       L+ SSI              +   A+ EQ
Sbjct: 11  VETALAEKLDGVSLDEVERILYGRPYRA---LEISSIAEKLAQDGDFQLSGYIVDAQKEQ 67

Query: 248 TRPPRIVKVGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQEWWNMPF 427
           TR PR+V+V  IQ+ I  PT   V EQ+ AI  +V  +I+ A   G N+I  QE W MPF
Sbjct: 68  TRAPRLVRVAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPF 127

Query: 428 AFCTREKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVSSILERDEKHSDILWNXAGCH* 607
           AFCTRE+ PW EFAES   GPTT FL +LA+K+ +VI+S ILERDE+  D++WN A    
Sbjct: 128 AFCTRERLPWTEFAESVYTGPTTQFLSKLAVKHDIVIISPILERDEEKDDVIWNTAVVI- 186

Query: 608 *PRKRDRGSIAKNHIPRVGEF 670
               R  G   KNHIPRVG+F
Sbjct: 187 SHTGRVIGRSRKNHIPRVGDF 207


>U21317-10|AAA62529.1|  753|Caenorhabditis elegans Hypothetical
           protein B0495.10a protein.
          Length = 753

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +3

Query: 288 IPSRCPPIVQSTSKRKQFSIKSRRSSMXPAKRVLTSSVSKSGG 416
           +P RC  ++Q++ ++ Q  +K R  +     RV  S++  SGG
Sbjct: 704 VPERCHSVLQTSREQYQRRLKERGLARMKFPRVELSTLESSGG 746


>Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical
           protein T21C9.3b protein.
          Length = 565

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 332 KAIFNKVKKIIDVAGQEGVNIICFQEWWNMP-FAFCTREKQPWCEF 466
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical
           protein T21C9.3a protein.
          Length = 501

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 332 KAIFNKVKKIIDVAGQEGVNIICFQEWWNMP-FAFCTREKQPWCEF 466
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,235,636
Number of Sequences: 27780
Number of extensions: 341298
Number of successful extensions: 910
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)