Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_D24
(917 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.3
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.3
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 9.0
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 9.0
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 22 9.0
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 9.0
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.3
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -3
Query: 420 IFHHSWKQMMLTPSWPATSMIFLTLLKIAFFCSLTGRSV 304
IFHH + PSW M+FL L S G+ +
Sbjct: 280 IFHHRTPDRYVMPSW--IKMLFLQWLPCLLRMSRPGKKI 316
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.3
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -3
Query: 420 IFHHSWKQMMLTPSWPATSMIFLTLLKIAFFCSLTGRSV 304
IFHH + PSW M+FL L S G+ +
Sbjct: 280 IFHHRTPDRYVMPSW--IKMLFLQWLPCLLRMSRPGKKI 316
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.3
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -3
Query: 420 IFHHSWKQMMLTPSWPATSMIFLTLLKIAFFCSLTGRSV 304
IFHH + PSW M+FL L S G+ +
Sbjct: 280 IFHHRTPDRYVMPSW--IKMLFLQWLPCLLRMSRPGKKI 316
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.3
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -3
Query: 420 IFHHSWKQMMLTPSWPATSMIFLTLLKIAFFCSLTGRSV 304
IFHH + PSW M+FL L S G+ +
Sbjct: 280 IFHHRTPDRYVMPSW--IKMLFLQWLPCLLRMSRPGKKI 316
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.3
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -3
Query: 420 IFHHSWKQMMLTPSWPATSMIFLTLLKIAFFCSLTGRSV 304
IFHH + PSW M+FL L S G+ +
Sbjct: 280 IFHHRTPDRYVMPSW--IKMLFLQWLPCLLRMSRPGKKI 316
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.3
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -3
Query: 420 IFHHSWKQMMLTPSWPATSMIFLTLLKIAFFCSLTGRSV 304
IFHH + PSW M+FL L S G+ +
Sbjct: 280 IFHHRTPDRYVMPSW--IKMLFLQWLPCLLRMSRPGKKI 316
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.8 bits (44), Expect = 9.0
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 153 LFRRPK*ILLNSSKSRPVKL 94
LFR PK I +N+++ + +KL
Sbjct: 119 LFRGPKGIQINATELQKIKL 138
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.8 bits (44), Expect = 9.0
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = -2
Query: 319 DWTIGGHRDGML 284
+W +G H DG L
Sbjct: 518 EWKVGNHEDGYL 529
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.8 bits (44), Expect = 9.0
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = -2
Query: 319 DWTIGGHRDGML 284
+W +G H DG L
Sbjct: 433 EWKVGNHEDGYL 444
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.8 bits (44), Expect = 9.0
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = -2
Query: 319 DWTIGGHRDGML 284
+W +G H DG L
Sbjct: 752 EWKVGNHEDGYL 763
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,920
Number of Sequences: 438
Number of extensions: 4260
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29871933
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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