Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_D21
(866 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC31F10.16 |||ChAPs family protein|Schizosaccharomyces pombe|c... 33 0.070
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 30 0.49
SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyce... 30 0.49
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 29 0.65
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 29 0.86
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 27 2.6
SPBC24C6.09c |||phosphoketolase |Schizosaccharomyces pombe|chr 2... 27 2.6
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 26 6.0
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 26 8.0
>SPBC31F10.16 |||ChAPs family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 679
Score = 32.7 bits (71), Expect = 0.070
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Frame = +1
Query: 67 KFCQSSD-YERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAA 243
KF S + Y+ AL A + + +P+E + C +L L +FK AL L +
Sbjct: 313 KFLISKERYDLALICAKRAVHASPSEFATWACLADVYLHLEDFKSALLALNSCPMYTYYE 372
Query: 244 DLLF-----EKAYTQYRLNSPKEALQTVDSAPELTPALKELRAQILYRL 375
+ +A+ + +N PKE L+ ++A E+ L RL
Sbjct: 373 RDAYPLPPSARAHLPFPVNFPKEELEVENNAQNGYTVSTEITDPYLARL 421
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 29.9 bits (64), Expect = 0.49
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +1
Query: 223 KNSALAADL--LFEKAYTQYR-LNSPKEALQTVDSAPELTPALKELRAQILYRLEQ-YQD 390
KN A L L +++Y YR L S AL + APE LK +RL Q Y D
Sbjct: 179 KNECRIAALVPLVQESYGIYRFLTSMLRALYSTVDAPETLEPLKHRYKSQHHRLRQFYAD 238
Query: 391 CYNL 402
C NL
Sbjct: 239 CSNL 242
>SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 906
Score = 29.9 bits (64), Expect = 0.49
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 70 FCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHN 189
FCQ +D ERALK + P++Q+ + + CF L N
Sbjct: 743 FCQQNDIERALK---MVRVHGPDQQELYIMMLNCFASLEN 779
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 29.5 bits (63), Expect = 0.65
Identities = 10/22 (45%), Positives = 19/22 (86%)
Frame = +1
Query: 352 RAQILYRLEQYQDCYNLYRDLL 417
+AQ+L +LE+YQ+ N+++DL+
Sbjct: 506 KAQVLEQLEKYQESLNIWKDLI 527
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 29.1 bits (62), Expect = 0.86
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 144 ESISLQSGMLSPTPQLQGGSSDINQCQE 227
E++ L +G L P P+ + G SDIN+ +E
Sbjct: 901 EALDLINGFLQPNPERRLGFSDINEIKE 928
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 27.5 bits (58), Expect = 2.6
Identities = 23/94 (24%), Positives = 34/94 (36%)
Frame = +1
Query: 364 LYRLEQYQDCYNLYRDLLKNTTDEYEDERKXXXXXXXXXXXXXXPTSELPQFDENTYELA 543
L+R YQD Y Y + L+ D E K P L D N +
Sbjct: 233 LFRQGNYQDAYEKYSEALQIDPDNKETVAKLYMNRATVLLRLKRPEEALSDSD-NALAID 291
Query: 544 YNSGSTLAMRGKYNEALSVLKRAEQACSXSVIXD 645
+ L +R K +EAL + A + ++ D
Sbjct: 292 SSYLKGLKVRAKAHEALEKWEEAVRDVQSAIELD 325
>SPBC24C6.09c |||phosphoketolase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 825
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -2
Query: 235 TLSSWHWLMSLEPP*SCGVGESIPLCNEMLSAHLVLSAVFSLQLLKLFHSHCSGKIYLIQ 56
T +SWH L+P S V + L +S + + +LL LF S ++ ++
Sbjct: 224 TATSWHAHKFLDPAESGAVIPVLELNGYKISERTIYGCMDDSELLSLF-SGFGYEVAIVN 282
Query: 55 DKPEQ 41
D P+Q
Sbjct: 283 DTPDQ 287
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 26.2 bits (55), Expect = 6.0
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +1
Query: 76 QSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNA 222
+S DY A+ A K ++ P KA+ + + + KEA+ A
Sbjct: 51 KSEDYGLAINDASKAIECDPEYAKAYFRRATAHIAIFQPKEAVGDFRKA 99
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 25.8 bits (54), Expect = 8.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 148 LSAHLVLSAVFSLQLLKLFHSHCSGKIYLIQDKPEQGYSPC 26
L+ L++ A L K F S S + + +D E+G+S C
Sbjct: 679 LAGSLLVGAFIQLACRKSFRSPVSAGVPIPKDVDEKGHSKC 719
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.132 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,966,583
Number of Sequences: 5004
Number of extensions: 53737
Number of successful extensions: 163
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 432473040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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