Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_D21
         (866 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80840-12|AAB37925.1|  694|Caenorhabditis elegans Hypothetical p...    94   1e-19
Z75526-7|CAE17729.1|  325|Caenorhabditis elegans Hypothetical pr...    37   0.016
AL021171-3|CAB54258.1|  749|Caenorhabditis elegans Hypothetical ...    31   0.81 
AL021171-2|CAA15957.1|  747|Caenorhabditis elegans Hypothetical ...    31   0.81 
Z73899-9|CAA98072.2|  905|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z11576-1|CAA77663.1|  625|Caenorhabditis elegans aromatic-L-amin...    29   5.7  
Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical pr...    28   7.5  

>U80840-12|AAB37925.1|  694|Caenorhabditis elegans Hypothetical
           protein F08D12.1 protein.
          Length = 694

 Score = 94.3 bits (224), Expect = 1e-19
 Identities = 58/206 (28%), Positives = 98/206 (47%)
 Frame = +1

Query: 16  MSANKENNLVQAYLELNKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFK 195
           M+      L Q   ++++   S DY++AL +A K+++  P E  AF CK+V  +QL  + 
Sbjct: 1   MADASAGGLYQCLTDISRADTSGDYQKALTSANKLIRKYPKETFAFKCKLVAQIQLSQYA 60

Query: 196 EALATLTNAKNSALAADLLFEKAYTQYRLNSPKEALQTVDSAPELTPALKELRAQILYRL 375
           +AL  +       +   + FEKAY  YR +   EA++ +++  +      EL+AQ+ Y+ 
Sbjct: 61  DALELIRKTPAHQMG-HVGFEKAYIHYRQDELDEAIKELNTCDKDDVKALELKAQVFYKQ 119

Query: 376 EQYQDCYNLYRDLLKNTTDEYEDERKXXXXXXXXXXXXXXPTSELPQFDENTYELAYNSG 555
           E YQ  Y++Y  LLKN +D+  DE +                 +     E++Y   YN  
Sbjct: 120 ENYQQAYDIYLYLLKNHSDD-SDELRRANFLAVQARLEAQGVKQAVAETEDSYSQLYNRA 178

Query: 556 STLAMRGKYNEALSVLKRAEQACSXS 633
                  K  +AL  L++A + C  S
Sbjct: 179 CVEIEAEKLPQALESLEKALKTCRKS 204


>Z75526-7|CAE17729.1|  325|Caenorhabditis elegans Hypothetical
           protein C06H2.7 protein.
          Length = 325

 Score = 37.1 bits (82), Expect = 0.016
 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
 Frame = +1

Query: 58  ELNKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSAL 237
           E+ K    S+ +R    A  + Q   +   +  C  V  L +  F E +AT+ N K+  +
Sbjct: 159 EILKIFNKSNIQRVQLRAETVSQQTKDLINSLECMNV-ELNIGKFDEMVATVNNIKDLRI 217

Query: 238 AADLLFEKAYTQYRLNSPK-EALQTVDSAPELTPALKELRA 357
              LLF +  T +RLN  +  A  T  S P +   + E RA
Sbjct: 218 RQQLLFFQLITIFRLNIARINASVTAASLPLIVECINEWRA 258


>AL021171-3|CAB54258.1|  749|Caenorhabditis elegans Hypothetical
           protein H04D03.2b protein.
          Length = 749

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 599 TDKASLYFPRIAKVLPELYANSYVFSSNCGSSD 501
           T + S++FPR     PE Y   YV  S+C  S+
Sbjct: 281 TTQKSIFFPRDRDYPPEFYTEPYVVLSSCSESE 313


>AL021171-2|CAA15957.1|  747|Caenorhabditis elegans Hypothetical
           protein H04D03.2a protein.
          Length = 747

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 599 TDKASLYFPRIAKVLPELYANSYVFSSNCGSSD 501
           T + S++FPR     PE Y   YV  S+C  S+
Sbjct: 281 TTQKSIFFPRDRDYPPEFYTEPYVVLSSCSESE 313


>Z73899-9|CAA98072.2|  905|Caenorhabditis elegans Hypothetical
           protein ZK829.2 protein.
          Length = 905

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
 Frame = +1

Query: 163 VVCFLQLHN--FKEALATLTNAK-NSALAADLLFEKAYTQYRLNSPKEALQTVDSAPELT 333
           ++CF    N  F +AL    N   N +LA+ +L  K   +  +NSPK + + +DSA +L 
Sbjct: 740 LICFRAKSNDMFNKALLYRCNETGNVSLASCVLQNKFVIRMCINSPKCSEEDLDSAYKLI 799

Query: 334 PALKELRAQILYRLE 378
               ++     YR+E
Sbjct: 800 CNEYDILKPFQYRIE 814


>Z11576-1|CAA77663.1|  625|Caenorhabditis elegans aromatic-L-amino
           acid  decarboxylaseprotein.
          Length = 625

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
 Frame = +1

Query: 163 VVCFLQLHN--FKEALATLTNAK-NSALAADLLFEKAYTQYRLNSPKEALQTVDSAPELT 333
           ++CF    N  F +AL    N   N +LA+ +L  K   +  +NSPK + + +DSA +L 
Sbjct: 460 LICFRAKSNDMFNKALLYRCNETGNVSLASCVLQNKFVIRMCINSPKCSEEDLDSAYKLI 519

Query: 334 PALKELRAQILYRLE 378
               ++     YR+E
Sbjct: 520 CNEYDILKPFQYRIE 534


>Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical
           protein AC3.4 protein.
          Length = 425

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
 Frame = -2

Query: 580 TSPALPKCCPSCMPI--RMCFHQTAAAL 503
           T+PA  +C PSCMP   + C  QT AA+
Sbjct: 122 TTPAPVQCQPSCMPACEQSCVVQTPAAV 149


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.132    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,574,707
Number of Sequences: 27780
Number of extensions: 306079
Number of successful extensions: 890
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)