Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_D21
(866 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g67680.1 68414.m07723 expressed protein 76 4e-14
At1g67650.1 68414.m07720 expressed protein 64 9e-11
At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containi... 39 0.005
At5g03160.1 68418.m00264 DNAJ heat shock N-terminal domain-conta... 35 0.081
At1g08190.1 68414.m00905 vacuolar assembly protein, putative (VP... 31 0.75
At1g12270.1 68414.m01419 stress-inducible protein, putative simi... 31 1.3
At4g29620.1 68417.m04221 cytidine deaminase, putative / cytidine... 30 1.7
At3g53700.1 68416.m05931 pentatricopeptide (PPR) repeat-containi... 30 1.7
At3g47660.1 68416.m05188 regulator of chromosome condensation (R... 30 1.7
At5g41730.1 68418.m05074 protein kinase family protein contains ... 30 2.3
At4g15490.1 68417.m02367 UDP-glucoronosyl/UDP-glucosyl transfera... 29 5.3
At2g12940.1 68415.m01419 expressed protein 29 5.3
At2g03480.2 68415.m00308 dehydration-responsive protein-related ... 28 7.0
At2g03480.1 68415.m00307 dehydration-responsive protein-related ... 28 7.0
At5g19400.1 68418.m02312 expressed protein 28 9.3
At4g04070.1 68417.m00576 hypothetical protein low similarity to ... 28 9.3
>At1g67680.1 68414.m07723 expressed protein
Length = 664
Score = 75.8 bits (178), Expect = 4e-14
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 8/197 (4%)
Frame = +1
Query: 52 YLELNKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEAL---ATLTNA 222
+ L++ + + YE A+K A ++L I P ++ A CKVV ++ F + L + A
Sbjct: 24 FTSLHQHIKDTKYEEAVKVADQVLSIVPTDEDAIRCKVVALIKDDKFDDYLIKDVKINGA 83
Query: 223 KN-----SALAADLLFEKAYTQYRLNSPKEALQTVDSAPELTPALKELRAQILYRLEQYQ 387
+ L DL F KAY YR+N EAL + T L L AQILYRL +
Sbjct: 84 LSVINSFQKLPIDLGFHKAYCLYRVNKLDEALVCLKGLERDTDTL-VLEAQILYRLGKAD 142
Query: 388 DCYNLYRDLLKNTTDEYEDERKXXXXXXXXXXXXXXPTSELPQFDENTYELAYNSGSTLA 567
C ++Y+ L K+ + E L +++ELAYN+ +L
Sbjct: 143 ACVDVYQKLTKSQIETLEVNLVAGLISAGKASQVQKTLESLKIKPTSSFELAYNTACSLI 202
Query: 568 MRGKYNEALSVLKRAEQ 618
Y +A +L A +
Sbjct: 203 ENNNYADAEQLLLTARR 219
>At1g67650.1 68414.m07720 expressed protein
Length = 651
Score = 64.5 bits (150), Expect = 9e-11
Identities = 57/194 (29%), Positives = 84/194 (43%), Gaps = 7/194 (3%)
Frame = +1
Query: 52 YLELNKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAK-N 228
+ L+K + + YE A+K A ++L I P ++ A CKVV ++ F + L + + K N
Sbjct: 20 FTSLHKHIKDTKYEEAVKVADQVLSIVPTDEDAIRCKVVALIKDDKFDDYL--IKDVKIN 77
Query: 229 SALAA------DLLFEKAYTQYRLNSPKEALQTVDSAPELTPALKELRAQILYRLEQYQD 390
AL+ DL F KAY YR N EAL + + L L AQIL L +
Sbjct: 78 GALSVINSFPIDLGFHKAYCLYRENKLDEALVCLKGLERESKTLL-LEAQILNCLGKVDA 136
Query: 391 CYNLYRDLLKNTTDEYEDERKXXXXXXXXXXXXXXPTSELPQFDENTYELAYNSGSTLAM 570
C ++Y+ L K+ E P TY+LAYN+ +L
Sbjct: 137 CVDVYQKLNKSGIKLIEVNLVAALIRAGKASQVLESLKIRP---TTTYQLAYNTACSLIE 193
Query: 571 RGKYNEALSVLKRA 612
Y +A +L A
Sbjct: 194 NSNYVDAEQLLLTA 207
>At4g37460.1 68417.m05302 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 883
Score = 38.7 bits (86), Expect = 0.005
Identities = 29/130 (22%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Frame = +1
Query: 19 SANKENNLVQAYLELNKFCQS-SDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFK 195
S ++N ++A+L L +F Q +D+ +AL+ ++LQ+ KA+H + + F L +
Sbjct: 459 SIQLDSNYLEAWLHLAQFYQELADHCKALECIEQVLQVDNRVWKAYHLRGLVFHGLGEHR 518
Query: 196 EALATLTNAKNSALAADLLFEKAYTQYRLNSPKEALQTVDSAPELTPALKELRAQILYRL 375
+A+ L+ + + L+ + + + ++A++ D+ ++ L + +L L
Sbjct: 519 KAIQELSIGLSIENTIECLYLRGSCYHAVGEYRDAVKDYDATVDV--ELDAVEKFVLQCL 576
Query: 376 EQYQDCYNLY 405
YQ LY
Sbjct: 577 AFYQKELALY 586
>At5g03160.1 68418.m00264 DNAJ heat shock N-terminal
domain-containing protein similar to P58 protein, Bos
primigenius taurus, PIR:A56534; similar to p58
(GI:1353270) {Homo sapiens}; contains Pfam PF00226: DnaJ
domain; contains Pfam PF00515: TPR Domain
Length = 482
Score = 34.7 bits (76), Expect = 0.081
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +1
Query: 250 LFEKAYTQYRLNSPKEALQTVDSAPELTPALKEL---RAQILYRLEQYQDCYNLYRDLLK 420
LFE+A ++ +AL +++A E PAL E RA +L +Y+D N Y+ L+
Sbjct: 53 LFERASQSIKVKRYSDALDDLNAAIEADPALSEAYFKRASVLRHFCRYEDSENSYQKYLE 112
Query: 421 NTTDEYEDERK 453
+ + E++
Sbjct: 113 FKSGDSNAEKE 123
>At1g08190.1 68414.m00905 vacuolar assembly protein, putative
(VPS41) 99.8% identical to Vacuolar assembly protein
VPS41 homolog (SP:P93043) [Arabidopsis thaliana];
similar to vacuolar assembly protein vps41 GI:1835787
from [Lycopersicon esculentum]
Length = 980
Score = 31.5 bits (68), Expect = 0.75
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 298 ALQTVDSAPELTPALKELRAQILYRLEQYQDCYNLYRDLLK 420
A++ + +T ALKE A++ QYQ ++LY DLLK
Sbjct: 538 AIEPQLNTSSMTDALKEALAELYVIDGQYQKAFSLYADLLK 578
>At1g12270.1 68414.m01419 stress-inducible protein, putative similar
to sti (stress inducible protein) [Glycine max]
GI:872116; contains Pfam profile PF00515 TPR Domain
Length = 572
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 5/101 (4%)
Frame = +1
Query: 64 NKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAA 243
N F + Y A+K + ++ PN+ KA+ + + +L E L +
Sbjct: 391 NDFFKEQKYPEAIKHYTEAIKRNPNDHKAYSNRAASYTKLGAMPEGL----KDAEKCIEL 446
Query: 244 DLLFEKAYT-----QYRLNSPKEALQTVDSAPELTPALKEL 351
D F K Y+ Q+ L A++T + E P+ +EL
Sbjct: 447 DPTFSKGYSRKAAVQFFLKEYDNAMETYQAGLEHDPSNQEL 487
>At4g29620.1 68417.m04221 cytidine deaminase, putative / cytidine
aminohydrolase, putative identical to cytidine deaminase
2 (CDA2) [Arabidopsis thaliana] GI:5080713, cytidine
deaminase homolog DesE [Arabidopsis thaliana]
GI:4836447; similar to cytidine deaminase (CDD)
[Arabidopsis thaliana] GI:3046700; contains Pfam profile
PF00383: Cytidine and deoxycytidylate deaminase
zinc-binding
Length = 337
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 34 NNLVQAYLELNKFCQSSDYERALKAAGKILQIAPN-EQKAFHCKVVCFLQLHNFKEAL 204
N +VQA L + K S ER K + IAPN + K FHC V C +L +E L
Sbjct: 270 NKIVQAVL-VEKNNASVSQERTAKII--LDTIAPNCDFKVFHCSVDCAKRLKYLRETL 324
>At3g53700.1 68416.m05931 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 754
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 520 DENTYELAYNSGSTLAMRGKYNEALSVLKRAE-QACSXSVI 639
DE TY + +S L +GK +EAL++LK+ E C+ SVI
Sbjct: 434 DEFTYNMLIDS---LCSKGKLDEALNMLKQMELSGCARSVI 471
>At3g47660.1 68416.m05188 regulator of chromosome condensation
(RCC1) family protein contains Pfam domain PF00415:
Regulator of chromosome condensation (RCC1)
Length = 951
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 70 FCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAADL 249
FC S +++L AA +AP + + C+++L +E+LAT NSA ++
Sbjct: 665 FCNSCTSKKSLAAA-----MAPKTNRPYRVCDDCYIKLEGIRESLAT---PANSARFSNA 716
Query: 250 LFEKAYTQYRLN-SPKEALQTVDS 318
+Y + +P+ L VDS
Sbjct: 717 SLPSSYEMDEIGITPQRQLLRVDS 740
>At5g41730.1 68418.m05074 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 711
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +1
Query: 1 YWVKKMSANKENNLVQAYLELNKFCQSSDYERALKAAGKILQIAPNEQK 147
+W K ++ ++ + V+ ++ N FC S A++AAG+I + P+E +
Sbjct: 92 WWGKVINLHQNKDCVEFHIH-NLFCYFSAVVEAIEAAGEISGLDPSEME 139
>At4g15490.1 68417.m02367 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase ;simalr to
UDP-glucose:sinapate glucosyltransferase GI:9794913 from
[Brassica napus]
Length = 479
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 94 RALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLT 216
R L+ GKI++ P E+ H + CFL + + LT
Sbjct: 332 RELEEKGKIVEWCPQERVLAHPAIACFLSHCGWNSTMEALT 372
>At2g12940.1 68415.m01419 expressed protein
Length = 294
Score = 28.7 bits (61), Expect = 5.3
Identities = 23/104 (22%), Positives = 44/104 (42%)
Frame = +1
Query: 58 ELNKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSAL 237
ELNK +S+ + ++ +I N + A H K + N + + + N S
Sbjct: 132 ELNKIAKSNKLKEVALDPKEVRRILKNRESAAHLKQKKLQYMINLEHRINFVENENASIF 191
Query: 238 AADLLFEKAYTQYRLNSPKEALQTVDSAPELTPALKELRAQILY 369
L E T +N KE + ++S E+ L+++ + L+
Sbjct: 192 EKIKLLENDKTM-MMNEKKEIMIRIESM-EIQAQLRDVLTEHLH 233
>At2g03480.2 68415.m00308 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase;
non-consensus GA donor site at exon 4
Length = 595
Score = 28.3 bits (60), Expect = 7.0
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +1
Query: 202 LATLTNAKNSALAADLLFEKAYTQYRLNSPKEALQTVD-SAPELTPALKELRAQILYRLE 378
LA LT+ + ++ L Y+ YR + A+ +D + L +LKE R E
Sbjct: 36 LAPLTSNSYDSSSSSTLVPNIYSNYRRIKEQAAVDYLDLRSLSLGASLKEFPFCGKER-E 94
Query: 379 QYQDCYNLYRDLLKNTTDEYEDER 450
Y CYN+ +LL + E +R
Sbjct: 95 SYVPCYNITGNLLAGLQEGEELDR 118
>At2g03480.1 68415.m00307 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase;
non-consensus GA donor site at exon 4
Length = 606
Score = 28.3 bits (60), Expect = 7.0
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +1
Query: 202 LATLTNAKNSALAADLLFEKAYTQYRLNSPKEALQTVD-SAPELTPALKELRAQILYRLE 378
LA LT+ + ++ L Y+ YR + A+ +D + L +LKE R E
Sbjct: 36 LAPLTSNSYDSSSSSTLVPNIYSNYRRIKEQAAVDYLDLRSLSLGASLKEFPFCGKER-E 94
Query: 379 QYQDCYNLYRDLLKNTTDEYEDER 450
Y CYN+ +LL + E +R
Sbjct: 95 SYVPCYNITGNLLAGLQEGEELDR 118
>At5g19400.1 68418.m02312 expressed protein
Length = 1093
Score = 27.9 bits (59), Expect = 9.3
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 8/136 (5%)
Frame = +1
Query: 55 LELNKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFK-EALA----TLTN 219
L+++K SS +ERA +I ++A QKA + LQL K EA+ T +
Sbjct: 4 LQMDKTTASSSWERAKSIYDEIAELANKRQKAGNPPDPNLLQLLREKYEAIILESHTFSE 63
Query: 220 AKNSALAADLLFEKAYTQYRLNSPKEALQTVDSAPELT--PALKELRAQILYRLEQY-QD 390
N + L K +RL+ + + +A + P+ E AQ+ + + +
Sbjct: 64 QHNIEIPLWQLHYKRIEYFRLHINRVLASSTSTAAQNVKGPSKAEQIAQLKLQFRTFLSE 123
Query: 391 CYNLYRDLLKNTTDEY 438
Y D++ +Y
Sbjct: 124 ATGFYHDMILKIRSKY 139
>At4g04070.1 68417.m00576 hypothetical protein low similarity to
protective antigen [Streptococcus pyogenes] GI:8996050,
fibrinogen-binding protein [Streptococcus equi]
GI:3093478
Length = 728
Score = 27.9 bits (59), Expect = 9.3
Identities = 25/108 (23%), Positives = 47/108 (43%)
Frame = +1
Query: 79 SSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAADLLFE 258
+++ ER A +QI E+ + K+V + L+NF LT+ + + L+ E
Sbjct: 3 TAEMERLFSAPHLTVQIRRGEEISAISKIVVMMALNNFPP--LHLTSRQLTQLSRHANDE 60
Query: 259 KAYTQYRLNSPKEALQTVDSAPELTPALKELRAQILYRLEQYQDCYNL 402
+ + P + S P L+P + ELR + + C++L
Sbjct: 61 QRPGRPPEEMPGSGGDALLSRPRLSPDVSELRLPCAGVIHRAFSCHDL 108
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.132 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,616,415
Number of Sequences: 28952
Number of extensions: 281043
Number of successful extensions: 797
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2028915200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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