Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_D18
         (889 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034673-1|AAH34673.1| 1332|Homo sapiens misshapen-like kinase 1...    33   1.8  
AY775058-1|AAV41830.1| 1312|Homo sapiens misshapen/NIKs-related ...    33   1.8  
AK127311-1|BAC86927.1|  223|Homo sapiens protein ( Homo sapiens ...    31   5.6  

>BC034673-1|AAH34673.1| 1332|Homo sapiens misshapen-like kinase 1
           (zebrafish) protein.
          Length = 1332

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 18/55 (32%), Positives = 24/55 (43%)
 Frame = -3

Query: 530 PPPSQNSPAWXXSSNRINAGSFKRATSVSRHVTTXHAWNETPCARRYYRPRTASA 366
           P PS N PAW    N       +R +S++  + T  A    P      RPR+ SA
Sbjct: 648 PGPSPNPPAWVRPDNEAPPKVPQRTSSIATALNTSGAGGSRPAQAVRARPRSNSA 702


>AY775058-1|AAV41830.1| 1312|Homo sapiens misshapen/NIKs-related
           kinase isoform beta protein.
          Length = 1312

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 18/55 (32%), Positives = 24/55 (43%)
 Frame = -3

Query: 530 PPPSQNSPAWXXSSNRINAGSFKRATSVSRHVTTXHAWNETPCARRYYRPRTASA 366
           P PS N PAW    N       +R +S++  + T  A    P      RPR+ SA
Sbjct: 628 PGPSPNPPAWVRPDNEAPPKVPQRTSSIATALNTSGAGGSRPAQAVRARPRSNSA 682


>AK127311-1|BAC86927.1|  223|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45380 fis, clone BRHIP3020733. ).
          Length = 223

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -1

Query: 478 TPGVLNGRRAFPATSPLCTLGTKHRAPADIIDRAPLPPNR 359
           TP +     + PA +P C L   HR    + D   LPP+R
Sbjct: 147 TPALWVDAPSLPAQAPWCLLSPGHRGATSLPDTMMLPPSR 186


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,926,841
Number of Sequences: 237096
Number of extensions: 2249342
Number of successful extensions: 2739
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2739
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)