Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_D17
(927 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 64 2e-10
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 64 2e-10
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 63 4e-10
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 60 3e-09
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 56 5e-08
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 54 2e-07
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10) 53 3e-07
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 51 1e-06
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 51 1e-06
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 50 2e-06
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 50 3e-06
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 48 8e-06
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06) 44 2e-04
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 44 2e-04
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 43 3e-04
SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22) 42 5e-04
SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022) 42 0.001
SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 41 0.001
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 39 0.007
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) 38 0.012
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 38 0.015
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 0.018
SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07) 37 0.020
SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.081
SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 35 0.11
SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11) 35 0.11
SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 35 0.11
SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.43
SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.43
SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2) 32 0.76
SB_41503| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.76
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 32 0.76
SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36) 31 1.0
SB_35882| Best HMM Match : Neur_chan_memb (HMM E-Value=8.8e-26) 31 1.3
SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92) 31 1.3
SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07) 31 1.7
SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8) 30 2.3
SB_54061| Best HMM Match : Neur_chan_memb (HMM E-Value=2.3e-32) 29 4.0
SB_18327| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2e-05) 29 4.0
SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15) 29 4.0
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0) 29 5.3
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 29 5.3
SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10) 29 5.3
SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043) 29 5.3
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) 29 5.3
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_14150| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06) 28 9.3
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 63.7 bits (148), Expect = 2e-10
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Frame = +3
Query: 264 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGD--YALRAR--VSNNGSV 428
W + LSWNA E+G S + ++LW+PD+ L N A ++A Y +A+ VS+ G
Sbjct: 119 WKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYNNADSSADGSLYGFKAKIKVSHTGLN 178
Query: 429 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 551
W+ ++T + + +P D Q+CT KFGS +++ +D
Sbjct: 179 MWLAPTILTTSCKINVKYFPFDQQSCTLKFGSWTYDAGSVD 219
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 63.7 bits (148), Expect = 2e-10
Identities = 39/156 (25%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Frame = +3
Query: 120 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 284
++ LL Y +++ P + + + L + LR ++ E + + I ++ W D L
Sbjct: 35 LLKYLLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLK 94
Query: 285 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNN------GSVSWIKR 443
WN ++G + ++ +R+W+PDV+L N A+T +L ++ N GS +W+
Sbjct: 95 WNPDDFGGIKSINIAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTNVIVNHDGSTTWLAP 154
Query: 444 LDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 551
I + + + +P D+Q+C FGS H+ ++D
Sbjct: 155 AIIKSECKIDVRFFPFDVQSCELTFGSWTHDGLKID 190
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +3
Query: 120 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 284
+++ L Y +++ P D + + L + LR ++ E E + ++ W D L
Sbjct: 453 LLNYLFQNYSKDARPVLNVDDPVQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHFLQ 512
Query: 285 WNAGEW-GCSTWLVSSERLWRPDVVLLN 365
WN ++ G + +++ +++W+PDV+L N
Sbjct: 513 WNPDDFSGIKSIIIAPDKVWKPDVLLFN 540
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 62.9 bits (146), Expect = 4e-10
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Frame = +3
Query: 186 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLL 362
LTL+ H ++E ++ L+ W D RL+WN E+G + S+ +W PD+ +L
Sbjct: 22 LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80
Query: 363 NAAATTAG--DYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 524
N+A + +R +++ G V W+ L + T M + ++P D Q C +FGS
Sbjct: 81 NSANKDMDLREKNIRLFINSAGEVLWMNPLILHTSCGMDIAHFPFDNQACELRFGS 136
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 59.7 bits (138), Expect = 3e-09
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 7/112 (6%)
Frame = +3
Query: 252 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARV------ 410
+++ W D L+WN ++G + V +W+PD++L N A+T +L ++
Sbjct: 26 IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVIL 85
Query: 411 SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDK 566
S++GS +W+ I T + + +P D+Q C KFGS H+ ++D + K
Sbjct: 86 SSDGSAAWLSPAIIKTECKVDVRLFPFDVQYCDLKFGSWTHDGLKIDIQLRK 137
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 59.3 bits (137), Expect = 4e-09
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Frame = +3
Query: 204 HANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA-AT 377
H + + TV L W D L+WN ++G + V +W PD+VL N +
Sbjct: 199 HQQLMGAPVTVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYNNVDSD 258
Query: 378 TAGD---YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDE 545
++G+ + + + ++G+V W+ + + + + + N+P D Q C +FGS ++ E
Sbjct: 259 SSGEMYKFTTKVNIHSDGTVQWLSPIQVKSECKIDITNFPLDEQFCKLEFGSWAYDGFE 317
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 56.0 bits (129), Expect = 4e-08
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Frame = +3
Query: 231 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLNAAATTAGDYALR- 401
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN A ++ +
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNE 91
Query: 402 ---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEM 548
V +NG V W+ + + + M + ++P D Q C KF S + E+
Sbjct: 92 GNPVLVESNGVVRWLAPVVLKSRCKMDVRSYPFDEQYCGLKFASWTGSQSEL 143
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 55.6 bits (128), Expect = 5e-08
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 13/122 (10%)
Frame = +3
Query: 237 RILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA--ATTAGD------ 389
+++ + + W + LSWNA E+ G S VS +R W PD++L N+ +A +
Sbjct: 16 KLIRIIAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNSVRFVDSAEEDDRLGG 75
Query: 390 ----YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 557
Y + + +NG SW+ + + +P D Q CT +FGS ++ ++D
Sbjct: 76 GTEKYKTQIEIRSNGYNSWLSPAMFKSTCDVNTRYFPFDDQHCTLEFGSWAFDASQLDLQ 135
Query: 558 ID 563
ID
Sbjct: 136 ID 137
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 53.6 bits (123), Expect = 2e-07
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Frame = +3
Query: 195 HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 371
HLR + V + ++ W + L+WN ++G + ++ ++W PD++L N A
Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYNNA 165
Query: 372 ATT-AGD---YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 524
T AG Y S++G+ W ++ ++ + +P D Q C+ KFGS
Sbjct: 166 DETYAGGLEKYKTSVIASSDGTQEWNSPASFTSTCNINVRYFPFDSQNCSLKFGS 220
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 53.2 bits (122), Expect = 3e-07
Identities = 42/180 (23%), Positives = 82/180 (45%), Gaps = 5/180 (2%)
Frame = +3
Query: 27 MSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRH 206
M+ + LLPFL S E+ +++ L Y++E+ P V+N + +
Sbjct: 1 MAPLLLSLLPFLFVFPSLSVDHTEDVEHR--LLNDLFKDYNKEARP----VLNKSEAI-- 52
Query: 207 ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN--AAAT 377
E + + + + W++ L+W+ +G T + V+ +W+PD+VL +
Sbjct: 53 ----EVQFDMAYAQLINLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVLYHNIGFGE 108
Query: 378 TAGDYAL--RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 551
T Y RA + +NG W +I + ++ + +P D Q C KFGS ++ +++
Sbjct: 109 TGAIYKFDTRATIMHNGYTEWFAPTEIHSICAIDITYFPFDEQFCKMKFGSWSYSGRQLN 168
>SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10)
Length = 384
Score = 53.2 bits (122), Expect = 3e-07
Identities = 28/107 (26%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Frame = +3
Query: 264 WIDKRLSWNAGEWGCSTWLVSSER-LWRPDVVLL-NAAATTAG--DYA-LRARVSNNGSV 428
W+++ +W+ E+G +V R +W+PD++L N G D+ R R++++G
Sbjct: 2 WLNQLTTWDPEEYGGVKEVVLQARDVWQPDIILYQNIIQDFDGRLDHTNTRVRITSSGMT 61
Query: 429 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKR 569
W + T ++ + ++P D Q C FGS H+ +E++ + D++
Sbjct: 62 YWSMPFVVVTLCTINVSDFPFDTQQCKLTFGSWQHDGNEINLINDRK 108
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 51.2 bits (117), Expect = 1e-06
Identities = 25/105 (23%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Frame = +3
Query: 252 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAT----TAGDYALRARVSN 416
+ + W + ++WN E+G + + LW+PD+ L N A + + + + +V+
Sbjct: 44 MDVKWENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYNNADSGYDGSLYGFTAKIKVNY 103
Query: 417 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 551
+G+ +W+ +T + + +P D Q C KFGS ++++ +D
Sbjct: 104 SGTNTWLAPKIFTTSCKINVKYFPFDQQECRLKFGSWTYDANSVD 148
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 51.2 bits (117), Expect = 1e-06
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Frame = +3
Query: 234 VRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGD----YAL 398
+ I+ + + W ++ L+W+ + G T + ++ +W PD+VL ++A + Y
Sbjct: 39 MEIVQIVNVRWDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKT 98
Query: 399 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 551
+S +GS +W + + + +P D QTC KFGS + ++D
Sbjct: 99 HVIISKDGSSAWFSPASFRSTCKIDVTYFPFDEQTCYMKFGSWTYTIADVD 149
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 50.4 bits (115), Expect = 2e-06
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Frame = +3
Query: 264 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAG---DYALRARVSNNGSV 428
W + L WN +G + VS ++W PD+VL N A A+T G ++ R VS++G
Sbjct: 40 WYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKN 99
Query: 429 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 551
W+ + S+ ++++ +P D Q C+ KFGS + +D
Sbjct: 100 MWLAPVIFSSSCTIKIKYFPFDDQYCSLKFGSWTFDGFHLD 140
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 50.0 bits (114), Expect = 3e-06
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Frame = +3
Query: 264 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAA---ATTAGDYAL---RARVSNNGS 425
W D L W+ ++ S + +W PDV L+N AG L V +G
Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLINNGDKLVHVAGGAELFNADTVVRQSGK 463
Query: 426 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID 563
V WI + ++ ++++ WP D Q CT F S + E+ +D
Sbjct: 464 VDWIAQASFTSTCNLRVRFWPMDDQFCTLTFSSWTYTESEIALKMD 509
>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
Length = 240
Score = 50.0 bits (114), Expect = 3e-06
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Frame = +3
Query: 255 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT---AGDYAL---RARVS 413
+ W + L W+ ++ + + +W PD+ LLN T AG ++ V
Sbjct: 123 ERTWRNPYLKWDKAKYQNRDRVHFDPKEIWVPDISLLNNGDNTVKMAGGRSIFLTNVVVE 182
Query: 414 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEM 548
N G W + + SM L WP D QTC KFGS + S+ M
Sbjct: 183 NTGKCVWSGPVTFTFTCSMALSRWPFDQQTCAMKFGSLSYGSNLM 227
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 49.2 bits (112), Expect = 5e-06
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Frame = +3
Query: 252 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAA----TTAGDYALRARVSN 416
L+M W D L WN ++G T + + + +W P V++ N A + R V +
Sbjct: 547 LRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYNQAGDLGESITSSNTPRPVVRS 606
Query: 417 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 551
+G+V W+ I + + + +P D Q C FGS ++ ++D
Sbjct: 607 DGTVLWMVPTVIKSSCVIDVKYFPFDQQLCKIIFGSWHYDVSKLD 651
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 48.4 bits (110), Expect = 8e-06
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Frame = +3
Query: 255 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA--ATTAGDYALRARVS--NN 419
+ W D L W+ + G T + V LW+PD+VL N Y +V +
Sbjct: 88 RQTWTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYNNVNDEDRGEQYLFNTKVIIYST 147
Query: 420 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 551
G + W + T + + +P D QTC FGS +N ++D
Sbjct: 148 GDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGSWTYNGLKID 191
>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 47.6 bits (108), Expect = 1e-05
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 14/156 (8%)
Frame = +3
Query: 150 RESPPDS---KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTW 317
R S PD ++VV+L + + +++ ++ I L+ W D L +N +++
Sbjct: 68 RPSTPDGGPLQVVVDLVI-ISMSSLDDNNMEYTISFYLRQTWHDPLLRYNKSSLVNAASY 126
Query: 318 LVSS----ERLWRPDVVLLNAAATTAG--DYAL---RARVSNNGSVSWIKRLDISTPISM 470
+ +++W+PD L N AG D +L RV NG+V++ R+ + M
Sbjct: 127 ATLNYALVDKIWKPDTYLENVKKIDAGSDDKSLVHKGFRVYPNGNVTFSTRISATLSCKM 186
Query: 471 QLDNWPNDMQTCTFKFGSRMHNSDEMDFVI-DKRIY 575
+ N+P D Q+C S DE+ ++ D RIY
Sbjct: 187 EFRNFPMDRQSCPVTISSYFFPEDEIYYIWGDLRIY 222
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 47.2 bits (107), Expect = 2e-05
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Frame = +3
Query: 252 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGD---YALRARVSN 416
+ + W + L+W+ +G T + V R+WRPD++L N A T G + + ++
Sbjct: 75 IDLKWNNPLLTWDPTHFGNLTSINVDPLRVWRPDLILYNNADRDTDGALDRFYTKVQLKF 134
Query: 417 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 557
+GS W+ + + + +P D Q+C KFGS ++ ++ V
Sbjct: 135 DGSSLWLAPIIFKSTCKFDVAYFPFDEQSCILKFGSWTYDGLRLNIV 181
>SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06)
Length = 147
Score = 44.0 bits (99), Expect = 2e-04
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
Frame = +3
Query: 264 WIDKRLSWNA-GEWGCSTWLVSSERLWRPDVVLLNAAATT---AGD---YALRARVSNNG 422
W D L W ++ + S + +W PDV L+N A + AG + V G
Sbjct: 2 WNDVFLKWRGEAKYQVTKTRFSPQEIWVPDVALINNADKSVRLAGGPELFKTDLNVWQGG 61
Query: 423 SVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEM 548
V W+ ++ +++ WP D Q CT F S ++ E+
Sbjct: 62 KVEWVAPASFTSDCKLRVRYWPIDDQFCTLTFSSWTYDDQEI 103
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +3
Query: 132 LLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 296
L TY+++ P D + V L L L ++ + T+ ++ ++ W D RL WN
Sbjct: 20 LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79
Query: 297 EW-GCSTWLVSSERLWRPDVVLLNAA 371
+ G ++ + RLW PD+ L N A
Sbjct: 80 AYDGVDNIVIKASRLWLPDITLYNNA 105
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +3
Query: 258 MNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 371
+ W++ LSWNA E+G +T V +RLW PD+VL N A
Sbjct: 77 VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYNNA 115
>SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22)
Length = 636
Score = 42.3 bits (95), Expect = 5e-04
Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Frame = +3
Query: 264 WIDKRLSWNAGEWGCSTWLVSS--ERLWRPDVVLLNAAATTA----GDYALRARVSNNGS 425
W DKRL AG+ S L S W+PD NA + D R + +G
Sbjct: 273 WTDKRL---AGKLNLSITLTGSAASNAWKPDPYCYNARQSNMMLEDKDVNSRLSIDPDGK 329
Query: 426 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF 554
+ + + + I M L ++P D Q C KFGS ++ F
Sbjct: 330 IFYSRGVSIVASCEMDLHDFPLDTQNCYLKFGSYAFTDTDIFF 372
>SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022)
Length = 91
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +3
Query: 330 ERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 509
+++W+PD + N ++T + + G V + +R+ + M L N+P D Q+C+
Sbjct: 26 KQIWKPDTYINNEKSSTVPENQFLLTIDPEGRVVYSQRMTVVASCMMYLRNYPMDTQSCS 85
Query: 510 FKFGS 524
F S
Sbjct: 86 ISFES 90
>SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 480
Score = 41.1 bits (92), Expect = 0.001
Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 4/149 (2%)
Frame = +3
Query: 120 MIDSLLATYDRESPP---DSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSW 287
++ +L YD+ S P + VN+++ ++ + I+ES + L+ W D RL+
Sbjct: 76 VLKRMLRKYDKYSRPYVGRRAVQVNISMAVQSFSQIKESNMEFEVFMYLRQEWNDPRLAH 135
Query: 288 NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPIS 467
S +W PD NA + + NG + + R +
Sbjct: 136 GYRAL-LSLAKDRVNDIWLPDTYFNNANEYEVYIVNQLSLIKPNGDIYYSGRNKVKGACQ 194
Query: 468 MQLDNWPNDMQTCTFKFGSRMHNSDEMDF 554
M L N+P D+Q C+ S + ++DF
Sbjct: 195 MDLFNFPLDVQRCSLVLESFAYTGRQIDF 223
>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 39.9 bits (89), Expect = 0.003
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Frame = +3
Query: 264 WIDKRLSWNAGEWGCSTWLVSSE--RLWRPDVVLLNA--AATTAGDYALRARVS--NNGS 425
W D+RL A S L E ++WRPD NA ++ TA D + + ++ NG
Sbjct: 12 WKDERL---ANRLNKSVVLKGDEITKMWRPDPFCYNARESSLTASDDDINSMMTIHPNGD 68
Query: 426 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNS 539
V + + I+ M+L ++P D Q C K GS +++
Sbjct: 69 VVYSRMTIITAECEMKLHDFPMDEQQCHLKLGSYSYST 106
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 38.7 bits (86), Expect = 0.007
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +3
Query: 252 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNN 419
+ + W D RL WN ++G +++ S +LW PD+ L N A + V+++
Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYNNANDNYEKEKEEYYGLTVNSD 335
Query: 420 GSVSWIKRLDISTPISMQLDNWPNDMQ 500
GS+ W + ++ + +P D Q
Sbjct: 336 GSIGWYYPTIFKSSCTIDVTYFPFDDQ 362
>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
Length = 79
Score = 37.9 bits (84), Expect = 0.012
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 231 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 365
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 37.5 bits (83), Expect = 0.015
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +3
Query: 96 ENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQM 260
++ L L+ D Y++ P D + V + + + + + ++L ++M
Sbjct: 27 QDDNELRLIKDLFFRGYNKNVRPVEDKSMPVEVKFGIAYTQVVDLIEKDQVLISNIWVRM 86
Query: 261 NWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 365
NW + L WNA E+G L +S +W PD+VL N
Sbjct: 87 NWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 28.3 bits (60), Expect(2) = 0.018
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 243 LADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 365
+ DLQ W + L+W+ ++G + V+ E +W PD+V+ N
Sbjct: 1467 IVDLQ--WENPILTWDPRDYGGVQEINVAPEEVWVPDIVIYN 1506
Score = 27.9 bits (59), Expect(2) = 0.018
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 483 WPNDMQTCTFKFGSRMHNSDEMD 551
+P D Q C KFGS H+S +D
Sbjct: 1509 FPFDEQKCLLKFGSWTHDSSRLD 1531
>SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07)
Length = 134
Score = 37.1 bits (82), Expect = 0.020
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +3
Query: 390 YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 551
+ + +VS+ G W+ ++T + + +P D Q+CT KFGS +++ +D
Sbjct: 13 FKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLKFGSWTYDAGSVD 66
>SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 35.1 bits (77), Expect = 0.081
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +3
Query: 363 NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSD 542
N A T + + ++ N+G W I + ++ + +P D Q C KFGS +N
Sbjct: 5 NVPAGTLYQFKTKVQLFNDGLCVWYAPTIIQSGCNIDITYFPFDDQLCELKFGSWTYNGL 64
Query: 543 EMDFV 557
E++ V
Sbjct: 65 EVNIV 69
>SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 319
Score = 34.7 bits (76), Expect = 0.11
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 408 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 524
V+N G V W + S+++ WP D+Q C+ FGS
Sbjct: 21 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGS 59
>SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11)
Length = 269
Score = 34.7 bits (76), Expect = 0.11
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 399 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF 554
+A V +NG W +I + + + +P D Q C KFGS + +++F
Sbjct: 21 KATVKHNGYTEWFAPTEIHSICKIDITFFPFDEQFCKLKFGSWTYTGRQLNF 72
>SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 400
Score = 34.7 bits (76), Expect = 0.11
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 408 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 524
V+N G V W + S+++ WP D+Q C+ FGS
Sbjct: 102 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGS 140
>SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 33.1 bits (72), Expect = 0.33
Identities = 33/160 (20%), Positives = 68/160 (42%), Gaps = 9/160 (5%)
Frame = +3
Query: 96 ENATSLSLMIDSLLATYDRESPP---DSKIVVNLTLHLRH-ANIRESESTVRILADLQMN 263
E A + + +D L ++ D+ P +VV + +++ + I + +++ +
Sbjct: 42 EYAKNTTKTLDRLKSSMDKRLRPFFGGKPVVVYVDIYIVNIGEISVTNMDYKLMLYYRQT 101
Query: 264 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATT-----AGDYALRARVSNNGSV 428
W D RL+++ E + +W PD + N ++T +Y L + NG+
Sbjct: 102 WHDPRLAFDLPE-AITVQGGMLNDIWIPDTLFTNEKSSTFHKVTQDNYLLS--IWPNGTT 158
Query: 429 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEM 548
R+ ++ M L +P D QTC S ++D +
Sbjct: 159 YLSMRISLTGICPMDLRKYPMDTQTCYLNIMSYSGSTDNL 198
>SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 32.7 bits (71), Expect = 0.43
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +3
Query: 336 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQT 503
LW PD NA + + D + + ++ +GS+ + + I M L ++P D QT
Sbjct: 17 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 76
Query: 504 CTFKFGSRMHNSDEM 548
C FGS + +++
Sbjct: 77 CNLVFGSYGYTDNDI 91
>SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 32.7 bits (71), Expect = 0.43
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +3
Query: 336 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQT 503
LW PD NA + + D + + ++ +GS+ + + I M L ++P D QT
Sbjct: 144 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 203
Query: 504 CTFKFGSRMHNSDEM 548
C FGS + +++
Sbjct: 204 CNLVFGSYGYTDNDI 218
>SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2)
Length = 75
Score = 31.9 bits (69), Expect = 0.76
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +3
Query: 408 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 551
+ + G + W + T + + +P D QTC FGS +N ++D
Sbjct: 19 IYSTGDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGSWTYNGLKID 66
>SB_41503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 31.9 bits (69), Expect = 0.76
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 417 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 557
NG W+ + +++ + + +P D Q C+ KFGS ++ + +D V
Sbjct: 22 NGINIWLAPVLLTSSCKIDVTYFPFDEQHCSLKFGSWTYDGERLDLV 68
>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
Length = 191
Score = 31.9 bits (69), Expect = 0.76
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 171 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 347
K +V LH + A + S S VR+ +++ W + L WN ++G T V+ +W P
Sbjct: 69 KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126
Query: 348 DVVLLN 365
D+VL N
Sbjct: 127 DIVLYN 132
>SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36)
Length = 592
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 414 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 551
+NG+ W + + +++ +P D QTC KFGS H+ +D
Sbjct: 207 SNGTNKWRSPALLKSICKIKVKFFPFDSQTCKLKFGSFSHDITTLD 252
>SB_35882| Best HMM Match : Neur_chan_memb (HMM E-Value=8.8e-26)
Length = 360
Score = 31.1 bits (67), Expect = 1.3
Identities = 11/40 (27%), Positives = 24/40 (60%)
Frame = +3
Query: 450 ISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKR 569
+ T ++ + ++P D Q C FGS H+ +E++ + D++
Sbjct: 5 VVTLCTINVSDFPFDTQQCKLTFGSWQHDGNEINLINDRK 44
>SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)
Length = 88
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 120 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 293
+++ LL YDR P + V +TL L T+ + D+ W + L+WN
Sbjct: 15 LLEKLLTGYDRNERPVLNDNESVTVTLGL----------TLNQIVDVI--WYNPLLTWNV 62
Query: 294 GEWG-CSTWLVSSERLWRPDVVL 359
E+G T VS +W PD+VL
Sbjct: 63 TEYGGLKTINVSPTIIWLPDIVL 85
>SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07)
Length = 301
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 405 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFK 515
R+ NG++ + RL +++ M L N+P D Q C K
Sbjct: 64 RIFPNGTLLYSMRLKVTSQCPMDLRNFPMDSQKCRLK 100
>SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)
Length = 156
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 264 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 365
W ++ L+W+ E+G ST V+ +++W PD+ L N
Sbjct: 2 WRNEYLTWDPKEFGGISTINVNVDKVWVPDIYLYN 36
>SB_54061| Best HMM Match : Neur_chan_memb (HMM E-Value=2.3e-32)
Length = 363
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = +3
Query: 408 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 557
+ ++G+ SW +I + + + +P D Q+C FGS + + ++ V
Sbjct: 10 IDSDGTNSWYAPTEIKSICQIDITYFPFDAQSCPIIFGSWTYTGNYLNLV 59
>SB_18327| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2e-05)
Length = 109
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/52 (23%), Positives = 25/52 (48%)
Frame = +3
Query: 414 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKR 569
N G++ W + + + + +P D Q C+ FGS + S+ + I ++
Sbjct: 12 NTGAIEWYAPTLVKSICKIDITYFPFDKQNCSLVFGSWTYTSEFLSLDIKQK 63
>SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)
Length = 296
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Frame = +3
Query: 330 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 500
+ +W P NA D + NG V + RL I+ + L +P+D+Q
Sbjct: 32 DEIWIPSTYFFNAKKAYFHDVTTENYLLMIKPNGDVFYSVRLTITMACKLTLQMFPHDVQ 91
Query: 501 TC 506
C
Sbjct: 92 VC 93
>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
Length = 360
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 312 TWLVSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNG 422
TWL+ +WRPD+VL +A D L R ++++NG
Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNG 306
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 29.1 bits (62), Expect = 5.3
Identities = 19/52 (36%), Positives = 22/52 (42%)
Frame = +3
Query: 489 NDMQTCTFKFGSRMHNSDEMDFVIDKRIYSMFXSXXWGCDGSVXCGCXTQEP 644
ND QTC + N DF+ D Y S W CDG CG + EP
Sbjct: 2917 NDRQTC-------LENCTNNDFMCDN--YRCI-SRLWRCDGEDDCGDGSDEP 2958
>SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 29.1 bits (62), Expect = 5.3
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +3
Query: 144 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEWGC 308
YD+ P D+ V L + + N I E V + ++ NW D RL+ N +
Sbjct: 14 YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72
Query: 309 STWLVSSERLWRPDVVLLNAAA 374
+ E++WRPD NA A
Sbjct: 73 TFTRGDIEKVWRPDTYCSNAHA 94
>SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10)
Length = 517
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +3
Query: 336 LWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 506
+W PD V ++A+ + + + V+ G V W R + M L +P D QTC
Sbjct: 38 VWVPDTVFVDASHAYMHNVMVANHKLDVTPGGRVFWGTRATLIARCHMNLRRYPMDEQTC 97
>SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043)
Length = 137
Score = 29.1 bits (62), Expect = 5.3
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +3
Query: 144 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEWGC 308
YD+ P D+ V L + + N I E V + ++ NW D RL+ N +
Sbjct: 14 YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72
Query: 309 STWLVSSERLWRPDVVLLNAAA 374
+ E++WRPD NA A
Sbjct: 73 TFTRGDIEKVWRPDTYCSNAHA 94
>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
Length = 428
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +3
Query: 252 LQMNWIDKRLSWNAG-EWGCSTWLVSSERLWRPDVVLLN 365
+ W D L WN G V +W PD+ L+N
Sbjct: 28 IYQEWKDPNLKWNKSIAQGVEEIFVDPSDIWTPDIALMN 66
>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -2
Query: 221 LTNVSMSQMQGQVDYDFGVGGRLPIVRCEERVDHE 117
L+++S +G VD FGV + +R +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628
>SB_14150| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 429
Score = 28.3 bits (60), Expect = 9.3
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 597 WGCDGSVXCGCXTQEPWG 650
+GCDG+ CGC WG
Sbjct: 217 YGCDGNYGCGCGCVYCWG 234
>SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06)
Length = 229
Score = 28.3 bits (60), Expect = 9.3
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Frame = +3
Query: 99 NATSLSLMIDSLLATYDRESPPD-SKIVVNLTLHLRHANIRE-SESTVRILAD--LQMNW 266
NA +LS+ I+ LA+YDR+ P+ + V + + + + E E+ + D L+ W
Sbjct: 15 NAHNLSVFINDALASYDRKVRPNYGGLPVMVLIEFKVISFGEIQEANMEYSFDIFLRQWW 74
Query: 267 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 365
D R N E + ++ W PD N
Sbjct: 75 YDPRFKSNFTE-PFTMAADPTKMFWTPDTYFWN 106
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,668,686
Number of Sequences: 59808
Number of extensions: 512645
Number of successful extensions: 1347
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2693287426
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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