Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_D16
         (857 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24310 Cluster: Polyprotein; n=1; Drosophila melanogast...    41   0.035
UniRef50_Q5C6W6 Cluster: SJCHGC02892 protein; n=1; Schistosoma j...    36   1.7  
UniRef50_A6S269 Cluster: Putative uncharacterized protein; n=2; ...    34   4.0  
UniRef50_Q41DP0 Cluster: Putative uncharacterized protein precur...    34   5.3  
UniRef50_Q4YVL7 Cluster: Putative uncharacterized protein; n=5; ...    33   7.0  
UniRef50_A2QUH4 Cluster: Similarity to SEQ ID NO:4184 from paten...    33   7.0  
UniRef50_Q4UDC7 Cluster: Putative uncharacterized protein; n=2; ...    33   9.2  

>UniRef50_Q24310 Cluster: Polyprotein; n=1; Drosophila
           melanogaster|Rep: Polyprotein - Drosophila melanogaster
           (Fruit fly)
          Length = 1053

 Score = 41.1 bits (92), Expect = 0.035
 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +2

Query: 323 NTSSCTPQERECSIRKSCNNVS--VTSMEDLSHEEIVTSYVLAHVAQFDCRRHHMAFTNG 496
           N  +  P   EC    +   V+   T   ++  EEI  + VLAH+A  D R   + FT+ 
Sbjct: 111 NLLNSRPTAAECYAVYASRLVTQLTTKWRNMEIEEIAVTTVLAHMANIDSRLQRVLFTSN 170

Query: 497 NTTRNKLLQEIKA 535
             TR+KL  E+KA
Sbjct: 171 VRTRSKLQAELKA 183


>UniRef50_Q5C6W6 Cluster: SJCHGC02892 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC02892 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 254

 Score = 35.5 bits (78), Expect = 1.7
 Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
 Frame = +2

Query: 254 YSHWRDVFEHVRSTAKIKHYADQNTSSCTPQERECSIRKSC---NNVSVTSMEDLSHE-- 418
           +S W    + +R   KI++ +DQ T+SC+   +   I+ SC   NN S++SM+ LS E  
Sbjct: 6   FSEW---LKEIRKKEKIENTSDQYTASCSSTTQ--VIQMSCGNENNKSISSMKTLSEEIN 60

Query: 419 ---EIVTSYVLAHVAQFDCRRHHMAFTNGNTTRNKLLQEIKASAN 544
              E+++S       + +C      F+  N  +NK + E K+S +
Sbjct: 61  GSDEVISSSTEMQSEKQNCNIIPELFSALN--KNKSIPEEKSSGS 103


>UniRef50_A6S269 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Botryotinia fuckeliana B05.10
          Length = 1289

 Score = 34.3 bits (75), Expect = 4.0
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +2

Query: 194 LVFNKIMSTLKLISEVRSGLYSHWRDVFEHVRS 292
           + FN ++  +K+  E+   L +HWRDV  H+++
Sbjct: 388 VTFNNLVDKIKVAGEITEMLITHWRDVVRHMKN 420


>UniRef50_Q41DP0 Cluster: Putative uncharacterized protein
           precursor; n=1; Exiguobacterium sibiricum 255-15|Rep:
           Putative uncharacterized protein precursor -
           Exiguobacterium sibiricum 255-15
          Length = 359

 Score = 33.9 bits (74), Expect = 5.3
 Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
 Frame = +2

Query: 380 NVSVTSMEDLS----HEEIVTSYVLAHVAQFDCRRHHMAFTNGNTTRNKLLQEIKASAN 544
           N+SV+S +++S    H E++  YV+ ++   D  +  +  +NG TT  K L+ +K+ +N
Sbjct: 196 NLSVSSQDEISLLGIHNEVIVYYVMENINGTDVSKEKLYMSNGKTT--KRLKGLKSFSN 252


>UniRef50_Q4YVL7 Cluster: Putative uncharacterized protein; n=5;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 327

 Score = 33.5 bits (73), Expect = 7.0
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +2

Query: 362 IRKSCNNVSVTSMEDLSHEEIVTSYVLAHVAQFDCRRHHMAFTNGNTTRNKLLQ 523
           I ++ N  S+  ++     E + +YV  H   FDC   ++     N T+NK++Q
Sbjct: 171 IIENINKYSIDQIDKFEEIEHIITYVYFHNIHFDCMTENLVTFLENHTKNKIIQ 224


>UniRef50_A2QUH4 Cluster: Similarity to SEQ ID NO:4184 from patent
           WO200056762-A2 - Aspergillus niger; n=1; Aspergillus
           niger|Rep: Similarity to SEQ ID NO:4184 from patent
           WO200056762-A2 - Aspergillus niger - Aspergillus niger
          Length = 468

 Score = 33.5 bits (73), Expect = 7.0
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +2

Query: 197 VFNKIMSTLKLISEVRSG---LYSHWRDVFEHVRSTAKIKHYADQNTSSCTPQE 349
           VF+ +MS+L L SE  +      SHWR+ FE +      K   DQ+T++   +E
Sbjct: 199 VFSSLMSSLSLSSENENNNPATESHWREAFEDLIRLENGKPMLDQDTTALAKRE 252


>UniRef50_Q4UDC7 Cluster: Putative uncharacterized protein; n=2;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria annulata
          Length = 891

 Score = 33.1 bits (72), Expect = 9.2
 Identities = 19/72 (26%), Positives = 33/72 (45%)
 Frame = +2

Query: 377 NNVSVTSMEDLSHEEIVTSYVLAHVAQFDCRRHHMAFTNGNTTRNKLLQEIKASANLK*N 556
           N V+ T   ++++ +    + LAH + F    H+M + + N+  N + Q    S N    
Sbjct: 288 NTVANTPNSNVTNSKYTLDHQLAHNSSFVPNSHNMGYKSVNSVNNNISQS-NISQNTNIT 346

Query: 557 FDRNNGSVMTSG 592
            +  NGS   SG
Sbjct: 347 CNNVNGSTFVSG 358


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 790,078,042
Number of Sequences: 1657284
Number of extensions: 14672521
Number of successful extensions: 32763
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32749
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75833093035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)