Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_D16
         (857 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98185-1|CAA66860.1|  123|Anopheles gambiae histone H2B protein.       27   0.97 
AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    25   2.9  
EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic anhy...    25   3.9  
AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    25   3.9  
AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative transcri...    25   3.9  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    24   5.1  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    24   6.8  

>X98185-1|CAA66860.1|  123|Anopheles gambiae histone H2B protein.
          Length = 123

 Score = 26.6 bits (56), Expect = 0.97
 Identities = 14/59 (23%), Positives = 29/59 (49%)
 Frame = +2

Query: 191 YLVFNKIMSTLKLISEVRSGLYSHWRDVFEHVRSTAKIKHYADQNTSSCTPQERECSIR 367
           Y V  ++     + S+  S + S   D+FE +   +++ HY     S+ T +E + ++R
Sbjct: 41  YKVLKQVHPDTGISSKAMSIMNSFVNDIFERIARKSRLAHY--NKRSTITSREIQTAVR 97


>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +2

Query: 323 NTSSCTPQERECSIRKSCNNVSVTSMEDLSHEEIVTSYVL 442
           N + C P+++        N V   ++ D+S   + +SYVL
Sbjct: 24  NCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYSSYVL 63


>EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic
           anhydrase protein.
          Length = 255

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 6   DMYWEIPPTALDCACLVHLLYPCYVV*FSDC 98
           D Y+   P AL+  C+V+ +    V   SDC
Sbjct: 75  DEYFSCEPAALELGCVVNNIKHIIVCGHSDC 105


>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = -3

Query: 162 NQQYVILTIHFNTCPTLTSTYNSH*ITQRNKDIVSAPGKR-SPTQW 28
           NQQ+ I  I     P  T    S  + ++N +  + PGK+ S + W
Sbjct: 245 NQQHDIALIRIEQTPPFTDFLRSICLPEQNFESSATPGKKLSVSGW 290


>AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative
           transcription factor protein.
          Length = 319

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 606 SCRNYPLVMTDPLLRSKFHLRFALALISCNSLLRVVFPLVNA 481
           SC NY      P L +  HL   + L++CN   R  +P +NA
Sbjct: 144 SCHNY----LQPDLFAA-HLHQQVGLVACNGNFRPRYPFLNA 180


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +2

Query: 335 CTP--QERECSIRKSCNNVSVTSMEDLSH 415
           C P  +ER+ ++ K C  + V  +E++SH
Sbjct: 110 CEPIWKERDDAVAKLCRTMDVRCVENVSH 138


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -1

Query: 683 QFTVSCPGL-LY*CHITLAVVIGLKTI-RVGT 594
           +F    PG  L+ CH    +VIG+  I +VGT
Sbjct: 700 RFRADNPGFWLFHCHFLFHIVIGMNLILQVGT 731


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 844,808
Number of Sequences: 2352
Number of extensions: 15076
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)